BLASTX 7.6.2
Query= UN33561 /QuerySize=1340
(1339 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44950.1 | Symbols: RDO4, HUB1 | HUB1 (HISTONE... 679 1e-195
TAIR9_protein||AT1G55250.1 | Symbols: HUB2 | HUB2 (HISTONE MONO-... 250 2e-066
TAIR9_protein||AT1G55250.2 | Symbols: HUB2 | HUB2 (HISTONE MONO-... 246 3e-065
>TAIR9_protein||AT2G44950.1 | Symbols: RDO4, HUB1 | HUB1 (HISTONE
MONO-UBIQUITINATION 1); protein binding / protein homodimerization/
ubiquitin-protein ligase/ zinc ion binding | chr2:18542602-18548247
REVERSE
Length = 879
Score = 679 bits (1751), Expect = 1e-195
Identities = 344/390 (88%), Positives = 364/390 (93%)
Frame = +2
Query: 2 SLSGVLSRKTKECEALHPRSADYASQLCDLNATVRDLKNSHEELKLFLDMYKRESTDPRD 181
SLSGVL RKTKE EAL RSADYASQL DLNATV DLKNSHEELKLFLDMYKRESTD RD
Sbjct: 490 SLSGVLCRKTKEYEALQLRSADYASQLGDLNATVCDLKNSHEELKLFLDMYKRESTDARD 549
Query: 182 IGEAKEEEYRAWAHVESLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQKID 361
I EAKE+EYRAWAHV+SLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQK+D
Sbjct: 550 IAEAKEQEYRAWAHVQSLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQKMD 609
Query: 362 DCKRDVVKHSDILKSKHEEHGTYLSEMQAIGSAYEDIVPQNQQLLLQVTERDDYNIKLYL 541
DCKRDV KHSDILKSKHEEHGTYLSE+Q IGSAYEDIVPQNQQLLLQVTERDDYNIKL+L
Sbjct: 610 DCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYEDIVPQNQQLLLQVTERDDYNIKLFL 669
Query: 542 EGITSRQMQDALLIDKYIMDKDIQQASASASFLSKKSLRIEDQMRFCTEQYQRLAEDRYQ 721
EGITSRQMQD LLIDKYIMDKDIQQ SA ASFLSKKS RIEDQ+RFCT+Q+Q+LAED+YQ
Sbjct: 670 EGITSRQMQDTLLIDKYIMDKDIQQGSAYASFLSKKSSRIEDQLRFCTDQFQKLAEDKYQ 729
Query: 722 KSTTHEILQKKRADVVNGLEQARSKLEESHSKVEQSRVDYGALELELEIERFNRRSIEEE 901
KS + E LQKKRAD+ NGLEQARS+LEESHSKVEQSR+DYGALELELEIERFNRR IEEE
Sbjct: 730 KSVSLENLQKKRADIGNGLEQARSRLEESHSKVEQSRLDYGALELELEIERFNRRRIEEE 789
Query: 902 VETVKPKVSRLRSLVEGSSAIQKLRQELNEFKEIFKCKACNDRPKEVVITKCFHLFCNPC 1081
+E K KVSRLRSL+EGSSAIQKLRQEL+EFKEI KCKACNDRPKEVVITKC+HLFCNPC
Sbjct: 790 MEIAKKKVSRLRSLIEGSSAIQKLRQELSEFKEILKCKACNDRPKEVVITKCYHLFCNPC 849
Query: 1082 VLKITGTRQRKCPTCSACFGPNDIKPIYI* 1171
V K+TGTRQ+KCPTCSA FGPNDIKPIYI*
Sbjct: 850 VQKLTGTRQKKCPTCSASFGPNDIKPIYI* 879
>TAIR9_protein||AT1G55250.1 | Symbols: HUB2 | HUB2 (HISTONE MONO-UBIQUITINATION
2); protein binding / zinc ion binding | chr1:20607214-20612302
FORWARD
Length = 901
Score = 250 bits (637), Expect = 2e-066
Identities = 144/386 (37%), Positives = 218/386 (56%), Gaps = 3/386 (0%)
Frame = +2
Query: 2 SLSGVLSRKTKECEALHPRSADYASQLCDLNATVRDLKNSHEELKLFLDMYKRESTDPRD 181
SL LS K E + L + A +++ L A + L +L+ + RE D R
Sbjct: 513 SLRVSLSNKADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRG 572
Query: 182 IGEAKEEEYRAWAHVESLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQKID 361
+ E K+ + +A A E LK+ LDE LELRVKAA+E E+ Q+ LA A+AEIA+LR ++D
Sbjct: 573 LAEIKDSQRKAQAQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLD 632
Query: 362 DCKRDVVKHSDILKSKHEEHGTYLSEMQAIGSAYEDIVPQNQQLLLQVTERDDYNIKLYL 541
+R+V++ + +K K +E ++EM+ IG AYED+ QNQ LL QV ERDDYNIKL
Sbjct: 633 LSEREVLELKEGIKVKEQEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVS 692
Query: 542 EGITSRQMQDALLIDKYIMDKDIQQASASASFLSKKSLRIEDQMRFC-TEQYQRLAEDRY 718
E + ++ + L +K +M+K + Q +AS + E+QM+ C +E Y+ + EDR+
Sbjct: 693 ESVKTKHAYNTHLSEKQVMEKQLHQVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRH 752
Query: 719 QKSTTHEILQKKRADVVNGLEQARSKLEESHSKVEQSRVDYGALELELEIERFNRRSIEE 898
+ E + + AD +S + S + EQ ++LEL+ ER ++ +EE
Sbjct: 753 LVISL-ETTKWEVADADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEE 811
Query: 899 EVETVKPKVSRLRSLVEGSSAIQKLRQELNEFKEIFKCKACNDRPKEVVITKCFHLFCNP 1078
E+ + ++ L S +AI +L++E+ K I KC C DRPKEVVI KC+HLFC
Sbjct: 812 ELMELNKELEELGS-ESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQ 870
Query: 1079 CVLKITGTRQRKCPTCSACFGPNDIK 1156
C+ + R RKCP C FG ND++
Sbjct: 871 CIQRSLEIRHRKCPGCGTAFGQNDVR 896
>TAIR9_protein||AT1G55250.2 | Symbols: HUB2 | HUB2 (HISTONE MONO-UBIQUITINATION
2); protein binding / zinc ion binding | chr1:20610166-20612302
FORWARD
Length = 384
Score = 246 bits (627), Expect = 3e-065
Identities = 140/378 (37%), Positives = 214/378 (56%), Gaps = 3/378 (0%)
Frame = +2
Query: 26 KTKECEALHPRSADYASQLCDLNATVRDLKNSHEELKLFLDMYKRESTDPRDIGEAKEEE 205
K E + L + A +++ L A + L +L+ + RE D R + E K+ +
Sbjct: 4 KADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIKDSQ 63
Query: 206 YRAWAHVESLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQKIDDCKRDVVK 385
+A A E LK+ LDE LELRVKAA+E E+ Q+ LA A+AEIA+LR ++D +R+V++
Sbjct: 64 RKAQAQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLE 123
Query: 386 HSDILKSKHEEHGTYLSEMQAIGSAYEDIVPQNQQLLLQVTERDDYNIKLYLEGITSRQM 565
+ +K K +E ++EM+ IG AYED+ QNQ LL QV ERDDYNIKL E + ++
Sbjct: 124 LKEGIKVKEQEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHA 183
Query: 566 QDALLIDKYIMDKDIQQASASASFLSKKSLRIEDQMRFC-TEQYQRLAEDRYQKSTTHEI 742
+ L +K +M+K + Q +AS + E+QM+ C +E Y+ + EDR+ + E
Sbjct: 184 YNTHLSEKQVMEKQLHQVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRHLVISL-ET 242
Query: 743 LQKKRADVVNGLEQARSKLEESHSKVEQSRVDYGALELELEIERFNRRSIEEEVETVKPK 922
+ + AD +S + S + EQ ++LEL+ ER ++ +EEE+ + +
Sbjct: 243 TKWEVADADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKE 302
Query: 923 VSRLRSLVEGSSAIQKLRQELNEFKEIFKCKACNDRPKEVVITKCFHLFCNPCVLKITGT 1102
+ L S +AI +L++E+ K I KC C DRPKEVVI KC+HLFC C+ +
Sbjct: 303 LEELGS-ESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEI 361
Query: 1103 RQRKCPTCSACFGPNDIK 1156
R RKCP C FG ND++
Sbjct: 362 RHRKCPGCGTAFGQNDVR 379
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,615,148,170
Number of Sequences: 33410
Number of Extensions: 17615148170
Number of Successful Extensions: 567487964
Number of sequences better than 0.0: 0
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