BLASTX 7.6.2
Query= UN33680 /QuerySize=912
(911 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containin... 151 1e-034
gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-contai... 93 6e-017
gi|225425126|ref|XP_002273398.1| PREDICTED: hypothetical protein... 66 6e-009
gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thal... 61 2e-007
gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum] 59 9e-007
gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema... 57 3e-006
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 761
Score = 151 bits (381), Expect = 1e-034
Identities = 79/142 (55%), Positives = 99/142 (69%), Gaps = 19/142 (13%)
Frame = +3
Query: 531 PCSSP--------SSPFLWLTSFLCVIRYPFVTKT-TAPPSSPTDGDWIRHVVKNDLWED 683
P SSP S PF+W TSFLC+IRYPFVTK+ T+ S D DWIR VV NDLW+D
Sbjct: 36 PLSSPSPSQSSFISCPFVWFTSFLCIIRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDD 95
Query: 684 PQIND-------PIRVPKILIELRGDPRLALKFFNWS-TR--FNRTVESHSIIAHILFCA 833
P + PI VP++L+EL+ DP+LA KFF WS TR F +VES+ I+AHILFCA
Sbjct: 96 PGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCA 155
Query: 834 RMYHDANTILREMVMLNSSCDV 899
RMY+DAN++L+EMV+ + CDV
Sbjct: 156 RMYYDANSVLKEMVLSKADCDV 177
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein,
putative [Ricinus communis]
Length = 775
Score = 93 bits (229), Expect = 6e-017
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 12/118 (10%)
Frame = +3
Query: 552 PFLWLTSFLCVIRYPFVTKTTAPPSSPTDGDWIRHVVKNDLWEDPQI-------NDPIRV 710
P + LT FLC++R+PF+T+++ D I +++ D W DP+ PI V
Sbjct: 41 PLMLLTGFLCILRFPFITQSSF--LGQLDKASIIKIIQQDQWNDPKFVRFIDSSLGPIWV 98
Query: 711 PKILIELRGDPRLALKFFNWS-TRFN--RTVESHSIIAHILFCARMYHDANTILREMV 875
++L+EL+ DP+LALKFF W+ T+F T ES+ ++ HILF ARMY DAN L+E++
Sbjct: 99 SRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELI 156
>gi|225425126|ref|XP_002273398.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 915
Score = 66 bits (160), Expect = 6e-009
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +3
Query: 699 PIRVPKILIELRGDPRLALKFFNWS---TRFNRTVESHSIIAHILFCARMYHDANTILRE 869
PI ++L+EL D RLAL+FF W+ F T E++ I+ HILFCAR Y DAN +L+E
Sbjct: 258 PIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKE 317
Query: 870 MVML 881
++ L
Sbjct: 318 LICL 321
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 61 bits (146), Expect = 2e-007
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3
Query: 780 FNRTVESHSIIAHILFCARMYHDANTILREMVMLNSSCDV 899
F +VES+ I+AHILFCARMY+DAN++L+EMV+ + CDV
Sbjct: 6 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDV 45
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 59 bits (141), Expect = 9e-007
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 3/43 (6%)
Frame = +3
Query: 780 FNRTVESHSIIAHILFCARMYHDANTILREMVMLNS---SCDV 899
FN T+ES+ I+AHILFCARMY+DAN+ILRE+V+ + CDV
Sbjct: 6 FNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDV 48
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 57 bits (137), Expect = 3e-006
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Frame = +3
Query: 780 FNRTVESHSIIAHILFCARMYHDANTILREMVMLNS---SCDV 899
F T+ES+ I+AHILFCARMY+DAN ILREMV+ + CDV
Sbjct: 6 FKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDV 48
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,838,211,009,744
Number of Sequences: 15229318
Number of Extensions: 3838211009744
Number of Successful Extensions: 902648105
Number of sequences better than 0.0: 0
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