BLASTX 7.6.2
Query= UN33891 /QuerySize=489
(488 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q58EA2|THO4A_XENLA THO complex subunit 4-A OS=Xenopus laevis ... 67 6e-011
sp|Q3T0I4|THOC4_BOVIN THO complex subunit 4 OS=Bos taurus GN=THO... 67 6e-011
sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=T... 67 6e-011
sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=T... 67 6e-011
sp|B5FXN8|THOC4_TAEGU THO complex subunit 4 OS=Taeniopygia gutta... 67 6e-011
sp|Q28FB9|THOC4_XENTR THO complex subunit 4 OS=Xenopus tropicali... 67 6e-011
sp|Q6GLW1|THO4B_XENLA THO complex subunit 4-B OS=Xenopus laevis ... 64 4e-010
sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS... 61 3e-009
>sp|Q58EA2|THO4A_XENLA THO complex subunit 4-A OS=Xenopus laevis GN=thoc4-a PE=2
SV=1
Length = 256
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 127 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 180
>sp|Q3T0I4|THOC4_BOVIN THO complex subunit 4 OS=Bos taurus GN=THOC4 PE=2 SV=1
Length = 257
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 127 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 180
>sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=THOC4 PE=1 SV=3
Length = 257
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 127 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 180
>sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=Thoc4 PE=1 SV=3
Length = 255
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 126 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 179
>sp|B5FXN8|THOC4_TAEGU THO complex subunit 4 OS=Taeniopygia guttata GN=THOC4
PE=2 SV=1
Length = 254
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 124 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 177
>sp|Q28FB9|THOC4_XENTR THO complex subunit 4 OS=Xenopus tropicalis GN=thoc4 PE=2
SV=1
Length = 260
Score = 67 bits (161), Expect = 6e-011
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGRPM +++
Sbjct: 130 AEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 183
>sp|Q6GLW1|THO4B_XENLA THO complex subunit 4-B OS=Xenopus laevis GN=thoc4-b PE=2
SV=1
Length = 256
Score = 64 bits (154), Expect = 4e-010
Identities = 26/54 (48%), Positives = 42/54 (77%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+H+D++GR GTA+V + R+ DA++A+K+YN V LDGR M +++
Sbjct: 126 AEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQL 179
>sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS=Mus musculus
GN=Refbp2 PE=1 SV=1
Length = 218
Score = 61 bits (147), Expect = 3e-009
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E G LK+ A+ +D++GR GTA+V + RR DA++A+K+Y V LDGRPM +++
Sbjct: 96 AEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL 149
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,766,061,048
Number of Sequences: 518415
Number of Extensions: 133766061048
Number of Successful Extensions: 831469033
Number of sequences better than 0.0: 0
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