BLASTX 7.6.2
Query= UN33891 /QuerySize=489
(488 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-b... 103 6e-023
TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-b... 103 6e-023
TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-b... 98 2e-021
TAIR9_protein||AT5G59950.1 | Symbols: | RNA and export factor-b... 86 1e-017
TAIR9_protein||AT5G59950.2 | Symbols: | RNA and export factor-b... 86 1e-017
TAIR9_protein||AT5G59950.3 | Symbols: | RNA and export factor-b... 86 1e-017
TAIR9_protein||AT5G59950.4 | Symbols: | RNA and export factor-b... 86 1e-017
TAIR9_protein||AT5G02530.1 | Symbols: | RNA and export factor-b... 80 4e-016
>TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 289
Score = 103 bits (256), Expect = 6e-023
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
SEIGE++RYAIH+DKNGRP+GTAEVVYPRR DA QALKKYNNVLLDGRPMRLEI
Sbjct: 114 SEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
Score = 82 bits (201), Expect = 1e-016
Identities = 41/50 (82%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -2
Query: 322 RGG---RGRGGRGRGGGGGRGNGKKAMEKSAADLDKDLESYHADAMNTS* 182
RGG RGRG GRG GGGRGNGKK +EKSAADLDKDLESYHADAMNTS*
Sbjct: 240 RGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS* 289
>TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 281
Score = 103 bits (256), Expect = 6e-023
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
SEIGE++RYAIH+DKNGRP+GTAEVVYPRR DA QALKKYNNVLLDGRPMRLEI
Sbjct: 114 SEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEI 167
Score = 82 bits (201), Expect = 1e-016
Identities = 41/50 (82%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -2
Query: 322 RGG---RGRGGRGRGGGGGRGNGKKAMEKSAADLDKDLESYHADAMNTS* 182
RGG RGRG GRG GGGRGNGKK +EKSAADLDKDLESYHADAMNTS*
Sbjct: 232 RGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS* 281
>TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-binding protein,
putative | chr1:24695895-24697883 REVERSE
Length = 296
Score = 98 bits (243), Expect = 2e-021
Identities = 45/54 (83%), Positives = 52/54 (96%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+EIGELKRYAIH+DKNGRP+G+AEVVY RR DAIQA++KYNNVLLDGRPM+LEI
Sbjct: 128 AEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEI 181
Score = 69 bits (167), Expect = 1e-012
Identities = 36/52 (69%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Frame = -2
Query: 319 GGRGRGGRGRGGGGGRGN------GKKAMEKSAADLDKDLESYHADAMNTS* 182
G G GRGRG GGGRGN GKK +EKSAADLDKDLESYHA+AMN S*
Sbjct: 245 GRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESYHAEAMNIS* 296
>TAIR9_protein||AT5G59950.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141504 FORWARD
Length = 245
Score = 86 bits (211), Expect = 1e-017
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E+GELKRY +HFD++GR GTAEVVY RRGDA+ A+KKYN+V LDG+PM++EI
Sbjct: 109 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 162
Score = 52 bits (123), Expect = 2e-007
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -2
Query: 370 NTTMCCWMEGQ*DLRFRGGRGRGGRGRGGGG-GRGNGKKAMEK-SAADLDKDLESYHADA 197
N+ W GQ + G GRGG GRGGGG GR GK EK SA DLD DL+ YH+
Sbjct: 181 NSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGD 240
Query: 196 MNTS* 182
M T+*
Sbjct: 241 METN* 245
>TAIR9_protein||AT5G59950.2 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140629-24141504 FORWARD
Length = 179
Score = 86 bits (211), Expect = 1e-017
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E+GELKRY +HFD++GR GTAEVVY RRGDA+ A+KKYN+V LDG+PM++EI
Sbjct: 43 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 96
Score = 52 bits (123), Expect = 2e-007
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -2
Query: 370 NTTMCCWMEGQ*DLRFRGGRGRGGRGRGGGG-GRGNGKKAMEK-SAADLDKDLESYHADA 197
N+ W GQ + G GRGG GRGGGG GR GK EK SA DLD DL+ YH+
Sbjct: 115 NSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGD 174
Query: 196 MNTS* 182
M T+*
Sbjct: 175 METN* 179
>TAIR9_protein||AT5G59950.3 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141504 FORWARD
Length = 243
Score = 86 bits (211), Expect = 1e-017
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E+GELKRY +HFD++GR GTAEVVY RRGDA+ A+KKYN+V LDG+PM++EI
Sbjct: 107 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 160
Score = 52 bits (123), Expect = 2e-007
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -2
Query: 370 NTTMCCWMEGQ*DLRFRGGRGRGGRGRGGGG-GRGNGKKAMEK-SAADLDKDLESYHADA 197
N+ W GQ + G GRGG GRGGGG GR GK EK SA DLD DL+ YH+
Sbjct: 179 NSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGD 238
Query: 196 MNTS* 182
M T+*
Sbjct: 239 METN* 243
>TAIR9_protein||AT5G59950.4 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141410 FORWARD
Length = 212
Score = 86 bits (211), Expect = 1e-017
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
+E+GELKRY +HFD++GR GTAEVVY RRGDA+ A+KKYN+V LDG+PM++EI
Sbjct: 109 AEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEI 162
>TAIR9_protein||AT5G02530.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:564332-565776 REVERSE
Length = 293
Score = 80 bits (197), Expect = 4e-016
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = -1
Query: 485 SEIGELKRYAIHFDKNGRPTGTAEVVYPRRGDAIQALKKYNNVLLDGRPMRLEI 324
SE+G+LKRY IH+D++GR GTAEVV+ RRGDA+ A+K+YNNV LDG+ M++EI
Sbjct: 129 SEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEI 182
Score = 53 bits (126), Expect = 7e-008
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -2
Query: 325 FRGGRGRGGRGRGGGGGRGNGKKAMEK--SAADLDKDLESYHADAMNTS* 182
F GG RGGRG G GGRG+G + ++ SA DLD +L+ YH +AM TS*
Sbjct: 244 FGGGNFRGGRGARGRGGRGSGGRGRDENVSAEDLDAELDKYHKEAMETS* 293
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,747,915,650
Number of Sequences: 33410
Number of Extensions: 17747915650
Number of Successful Extensions: 572628309
Number of sequences better than 0.0: 0
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