BLASTX 7.6.2
Query= UN33955 /QuerySize=934
(933 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular... 285 4e-077
TAIR9_protein||AT3G28780.1 | Symbols: | unknown protein | chr3:... 51 8e-007
>TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40
repeat (InterPro:IPR001680), WD40/YVTN repeat-like
(InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336
species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794;
Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI
BLink). | chr5:8459148-8467920 REVERSE
Length = 1378
Score = 285 bits (727), Expect = 4e-077
Identities = 169/247 (68%), Positives = 179/247 (72%), Gaps = 32/247 (12%)
Frame = -2
Query: 932 HAHAHGRPTLKNLVQAWNKTLQKEVEQAPSSKTDAASAFLASLEDSKLTSLSDASKKPPI 753
HAHAHGRPTLKNLVQAWNKTLQKEVE+APSSKTDAASAFLASLED KLTSLSDAS+KPPI
Sbjct: 1114 HAHAHGRPTLKNLVQAWNKTLQKEVEKAPSSKTDAASAFLASLEDPKLTSLSDASRKPPI 1173
Query: 752 EILPPGMSSIFASISAPKKPLPTLKTPEPVTTTVKPTENAATGRQQVTYP-PIEAPPSSE 576
EILPPGMSSIFASI+APKKPL T KT +P KP ++ T P IEAPPSSE
Sbjct: 1174 EILPPGMSSIFASITAPKKPLLTQKTAQP--EVAKP-----LALEEPTKPLAIEAPPSSE 1226
Query: 575 QPQTESTPETAADPESAAPETAANSESAAPETAAVSETEARETAADSESAAPEAAAVAEA 396
PQTES PETAA ES APETAA +ES AP TAAV+E A ET A
Sbjct: 1227 APQTESAPETAAAAESPAPETAAVAESPAPGTAAVAEAPASET----------------A 1270
Query: 395 AAHVDGPVTETVSEPPVV--EETPSEEKSDPSSTPNTETVLAATEGNSQTMPQP-----P 237
AA VDGPVTETVSEPP V EET EEKSDPSSTPNTET +TE SQT P
Sbjct: 1271 AAPVDGPVTETVSEPPPVEKEETSLEEKSDPSSTPNTETA-TSTENTSQTTTTPESVTTA 1329
Query: 236 PPEPVTT 216
PPEP+TT
Sbjct: 1330 PPEPITT 1336
>TAIR9_protein||AT3G28780.1 | Symbols: | unknown protein |
chr3:10806131-10808369 REVERSE
Length = 675
Score = 51 bits (121), Expect = 8e-007
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 7/165 (4%)
Frame = +1
Query: 298 GVEDGSLFSSEGVSSTTGGSDTVSVTGPSTCAAASATAAASGAADSESAAVSRASVSETA 477
G E S ++ G S TGGS S AA+ +A+ GAA S S V S A
Sbjct: 404 GGESASGGATSGGSPETGGSAETGGESASGGAASGGESASGGAASSGS--VESGGESTGA 461
Query: 478 AVSGAADSELAAVSGAADSGSAAVSGVDSVCGCSEDGGASIGGYVTCCLPVAAFSVGFTV 657
G+A++ + SG A SG + SG + G +E GG S V + S
Sbjct: 462 TSGGSAETSDESASGGAASGGESASGGAASGGSAETGGESTSSGVASGGSTGSESASAGA 521
Query: 658 VVTGS-----GVFSVGSGFLGAEMEAKIEDIPGGRISIGGFLDAS 777
GS G + GS G+ + + GG + GG ++S
Sbjct: 522 ASGGSTEANGGAAAGGSTEAGSGTSTETSSMGGGSAAAGGVSESS 566
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,747,915,650
Number of Sequences: 33410
Number of Extensions: 17747915650
Number of Successful Extensions: 572628309
Number of sequences better than 0.0: 0
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