BLASTX 7.6.2
Query= UN34186 /QuerySize=1063
(1062 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297819234|ref|XP_002877500.1| predicted protein [Arabidopsis ... 126 6e-027
gi|297795303|ref|XP_002865536.1| hypothetical protein ARALYDRAFT... 114 4e-023
gi|3176712|gb|AAD12028.1| putative non-LTR retroelement reverse ... 102 1e-019
gi|3738337|gb|AAC63678.1| putative non-LTR retroelement reverse ... 102 2e-019
gi|55978729|gb|AAV68826.1| hypothetical protein AT1G21330 [Arabi... 101 4e-019
gi|3461840|gb|AAC33226.1| putative non-LTR retroelement reverse ... 99 8e-019
gi|3047086|gb|AAC13599.1| similar to reverse transcriptase (Pfam... 98 2e-018
gi|110740597|dbj|BAE98403.1| putative non-LTR reverse transcript... 98 2e-018
gi|9758853|dbj|BAB09379.1| non-LTR retroelement reverse transcri... 97 5e-018
gi|7529260|emb|CAB86676.1| putative protein [Arabidopsis thaliana] 95 2e-017
gi|9279779|dbj|BAB01431.1| non-LTR retroelement reverse transcri... 95 2e-017
gi|3785984|gb|AAC67331.1| putative non-LTR retroelement reverse ... 95 2e-017
gi|8778349|gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thali... 93 6e-017
gi|49617739|gb|AAT67565.1| hypothetical protein At1G54955 [Arabi... 93 6e-017
gi|158828172|gb|ABW81051.1| tn7 reverse transcriptase [Arabidops... 93 8e-017
gi|12322150|gb|AAG51106.1|AC069144_3 hypothetical protein [Arabi... 92 1e-016
gi|9369395|gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thali... 92 1e-016
gi|12321684|gb|AAG50886.1|AC025294_24 hypothetical protein [Arab... 89 1e-015
gi|9755374|gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 87 3e-015
gi|9802599|gb|AAF99801.1|AC012463_18 T2E6.13 [Arabidopsis thaliana] 85 2e-014
>gi|297819234|ref|XP_002877500.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 136
Score = 126 bits (316), Expect = 6e-027
Identities = 55/120 (45%), Positives = 82/120 (68%)
Frame = -2
Query: 611 MRQWGHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINPDWSRTIASLRNN 432
MR WG TQ C+ CGEP E+RDHLFFACP+T+TIW L +P L ++ PDWS+T+ SLR+
Sbjct: 1 MRAWGVTQPCVFCGEPTESRDHLFFACPYTFTIWFELTSPLLRHKLTPDWSQTLLSLRST 60
Query: 431 RLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYREMQNRLIALHHGKG 252
+L D + ++ FQAS+Y WRERNGR + +S+ + +++ + ++ R+ +L KG
Sbjct: 61 QLKLHDKTLARLAFQASVYLLWRERNGRIHNQCSNSSTTMLKTIDKAIKERISSLKSRKG 120
>gi|297795303|ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542
[Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 114 bits (283), Expect = 4e-023
Identities = 49/95 (51%), Positives = 68/95 (71%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINP 468
+A +++L TG RMR WG Q C+ C E DE+RDHLFFACPFTY+IW+ L + L ++NP
Sbjct: 100 LAVKDQLSTGTRMRAWGVEQPCVFCRERDESRDHLFFACPFTYSIWSELTSRLLRRKLNP 159
Query: 467 DWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWR 363
DWSRT+ SLR+ +L K D ++ M FQ ++Y W+
Sbjct: 160 DWSRTLLSLRSPQLTKRDQNLLCMIFQTTLYMVWK 194
>gi|3176712|gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana]
Length = 1447
Score = 102 bits (254), Expect = 1e-019
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWG--HTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A +RL TGDRM W + C+ C P ++RDHLFF CP++ +WT+ L R
Sbjct: 1299 LAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVWTVTAKNILTTRF 1358
Query: 473 NPDWS---RTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARS 303
DW T++SL+ NR ++ +V+ FQAS+Y W ERN RR+ N HSA +
Sbjct: 1359 TTDWHLLLNTVSSLQQNR---VENFLVRYAFQASVYSIWSERNRRRHGNTLHSATRLIGW 1415
Query: 302 VYREMQNRLIALHHGKGDGVLNEGLNRW 219
+ ++++N L ++ KGD + GL W
Sbjct: 1416 IDKQVRNILSSIRI-KGDRHYDAGLQMW 1442
>gi|3738337|gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana]
Length = 1216
Score = 102 bits (252), Expect = 2e-019
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A RNRL TGDRM W G C+ C P ETRDHLFF C ++ IWT + R
Sbjct: 797 LAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDRF 856
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ WS + + +++ +I + + + TFQ SI+ WRERN RR+ SA + R + +
Sbjct: 857 STKWSAVVNYISDSQPDRIQSFLSRYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQIDK 916
Query: 293 EMQNRLIALHHGKGDGVLNEGL 228
++N+L + KGD L +GL
Sbjct: 917 TIRNQLSTIKK-KGDLRLEKGL 937
>gi|55978729|gb|AAV68826.1| hypothetical protein AT1G21330 [Arabidopsis
thaliana]
Length = 152
Score = 101 bits (249), Expect = 4e-019
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A RNRL TGDRM QW G C+ C P ETR+HLFFAC ++ +WT L L+ R
Sbjct: 4 LAVRNRLSTGDRMLQWNMGVNSCCVFCHAPVETRNHLFFACQYSADVWTGLSRKLLSQRF 63
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ DW I + + L K +V+ TFQ +++ W+ERNG R+ P + + R + +
Sbjct: 64 STDWDMIIKLITDTSLGKGCLFLVRYTFQLTVHSIWKERNGHRHGEAPIPSSQLTRRLDK 123
Query: 293 EMQNRLIAL 267
+ +NR+ ++
Sbjct: 124 QTRNRISSI 132
>gi|3461840|gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana]
Length = 1529
Score = 99 bits (246), Expect = 8e-019
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Frame = -2
Query: 638 RNRLDTGDRMRQWGHTQI--CLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINPD 465
+NRL TGDR++ W Q+ C LC +ETRDHLFF+C +T +W L L+ + D
Sbjct: 1376 QNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRD 1435
Query: 464 WSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYREMQ 285
W+R L + LP+ + + FQASIY WRERN RR+ + + + + ++
Sbjct: 1436 WNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERNARRHGEISSPTNRLIKLIDKTVR 1495
Query: 284 NRLIALHHGKGDGVLNEGLNRW 219
NR+ ++ GD N+ + W
Sbjct: 1496 NRISSI-RDTGDHNYNDCMQLW 1516
>gi|3047086|gb|AAC13599.1| similar to reverse transcriptase (Pfam:
transcript_fact.hmm, score: 72.31) [Arabidopsis thaliana]
Length = 928
Score = 98 bits (243), Expect = 2e-018
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWG--HTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A N+L TG RM+ W + C+LC ETRDHLFF+C +T IW L L
Sbjct: 780 LAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYTSGIWEALAKNLLQRSY 839
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
DW I+ + ++ + + QAS+Y WRERNGRR+ P+ A + + + +
Sbjct: 840 TTDWQTIISYVSGQCHDRVSCFLARSVLQASVYTIWRERNGRRHGETPNPAARLIQWIDK 899
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
++N L +H KGD ++GL W
Sbjct: 900 HIRNMLSVIHQ-KGDKRYDKGLQMW 923
>gi|110740597|dbj|BAE98403.1| putative non-LTR reverse transcriptase
[Arabidopsis thaliana]
Length = 278
Score = 98 bits (243), Expect = 2e-018
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGH--TQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A NRL TGDR+ +W C+ C E ETRDHLFF+CP++ IW L L GR
Sbjct: 130 LAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRN 189
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
WS L ++ P + ++ TFQA I+ WRERNGRR+ P A + + + +
Sbjct: 190 VSSWSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGRRHGEPAIPASKLTKLIDK 249
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
++NR L G+ L GL W
Sbjct: 250 NIRNRFSTLQK-MGNKRLQGGLQYW 273
>gi|9758853|dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like
protein [Arabidopsis thaliana]
Length = 1223
Score = 97 bits (239), Expect = 5e-018
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A RL TGDRM W G C+ C ETRDHLFF C FT IW L +
Sbjct: 1075 LAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQY 1134
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
W I ++ N++ +++ + + FQA+IY WRERNGRR+ PP++A + + +
Sbjct: 1135 TSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDK 1194
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
+++N+L ++ KGD + L W
Sbjct: 1195 QIRNQLSSICL-KGDKRYDGSLQVW 1218
>gi|7529260|emb|CAB86676.1| putative protein [Arabidopsis thaliana]
Length = 534
Score = 95 bits (235), Expect = 2e-017
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGHTQI--CLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A RNRL TG+++ +W + C C E ETR+H+FF+CP++ +W+ L L
Sbjct: 123 IAFRNRLATGEKLVKWNNDANGGCSFCDEAMETREHIFFSCPYSSAVWSALTKDLLGQLF 182
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
W A L + PK+ +++ FQ SI+ WRERNGRR+ P + +A+ + +
Sbjct: 183 TTSWESMTALLTDPPRPKVHMFVLRYVFQLSIHTLWRERNGRRHGASPIPSSKLAKLIDK 242
Query: 293 EMQNRLIAL 267
+QNRL L
Sbjct: 243 NVQNRLTTL 251
>gi|9279779|dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like
protein [Arabidopsis thaliana]
Length = 637
Score = 95 bits (234), Expect = 2e-017
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGH--TQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A NRL TGDR+ +W C+ C E ETRDHLFF+CP++ IW L L GR
Sbjct: 298 LAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRN 357
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
WS L ++ P + ++ TFQA I+ WRERNGRR+ P A + + + +
Sbjct: 358 VSSWSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGRRHGEPAIPASKLTKLIDK 417
Query: 293 EMQNRLIAL 267
++NR L
Sbjct: 418 NIRNRFSTL 426
>gi|3785984|gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana]
Length = 1449
Score = 95 bits (234), Expect = 2e-017
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A +RL TGD+M W G CLLC E+RDHLFF+C F+ +W M
Sbjct: 1301 LAVYDRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSCSFSSEVWEMSAKSIYKSSY 1360
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ DW + ++ N ++++ I + FQ S+Y WRERN R++ P+ A + R + +
Sbjct: 1361 STDWRHLLTKIQENWKDRVESFIARYIFQVSVYAIWRERNRRKHGRNPNQAAQLVRWIDK 1420
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
+++++L A+ GD ++G W
Sbjct: 1421 QIRDQLSAIKL-MGDRRYDQGFQFW 1444
>gi|8778349|gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
Length = 236
Score = 93 bits (230), Expect = 6e-017
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A NRL TGDRM W G + C+LC ETRDHLFF+C F +W+ L R
Sbjct: 121 LAVLNRLSTGDRMTHWNGGQSAACVLCHNAPETRDHLFFSCDFASIVWSNLARGIYGDRF 180
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIAR 306
+ W I ++ + + +D+ + FQA+++ WRERNGR + P+SA + +
Sbjct: 181 STHWQDLIQAISGSWMTPLDSFFARYLFQATVHTIWRERNGRNHGEKPNSAALLIK 236
>gi|49617739|gb|AAT67565.1| hypothetical protein At1G54955 [Arabidopsis
thaliana]
Length = 137
Score = 93 bits (230), Expect = 6e-017
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Frame = -2
Query: 611 MRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINPDWSRTIASLR 438
M +W G T C+LC ETRDHLFF+CPF IW ++ + + DWS+ + +
Sbjct: 1 MMKWIGGATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIFKDKYSTDWSQLLDHVS 60
Query: 437 NNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYREMQNRLIALHHG 258
N ++++ + + FQA++Y W ERNGRR+ PHS + + + ++N++ +
Sbjct: 61 NANQTQLESYLSRSAFQATVYTIWGERNGRRHGEEPHSTTLLTTWIDKHIRNKISTIRR- 119
Query: 257 KGDGVLNEGLNRW 219
GD +E W
Sbjct: 120 MGDRRYDEAYQAW 132
>gi|158828172|gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata
subsp. lyrata]
Length = 441
Score = 93 bits (229), Expect = 8e-017
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A +NRL TGDRM W G C+ C E ETR+HLFF C ++ +W+ L + L
Sbjct: 294 LATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTRHY 353
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ DW+ + L + L +++ FQ +Y W+ERN RR+ P + + + + +
Sbjct: 354 STDWTTILKLLTDKTLGNNRLFLLRYAFQILVYSIWKERNSRRHGEEPLPSALLLKRLDK 413
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
E++N+L + KGDG + W
Sbjct: 414 EVRNKLSTI-RDKGDGRYERCMITW 437
>gi|12322150|gb|AAG51106.1|AC069144_3 hypothetical protein [Arabidopsis
thaliana]
Length = 137
Score = 92 bits (228), Expect = 1e-016
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Frame = -2
Query: 611 MRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINPDWSRTIASLR 438
M +W G T C+LC ETRDHLFF+CPF IW ++ + + DWS+ + +
Sbjct: 1 MMKWIGGATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIFKDKYSTDWSQLLDHVS 60
Query: 437 NNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYREMQNRLIALHHG 258
N ++++ + + FQA++Y W ERNGRR+ PHS + + + ++N++ +
Sbjct: 61 NANQTQLESFLSRSAFQATVYTIWGERNGRRHGEEPHSTTLLTTWIDKHIRNKISTIRR- 119
Query: 257 KGDGVLNEGLNRW 219
GD +E W
Sbjct: 120 MGDRRYDEAYQAW 132
>gi|9369395|gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 92 bits (227), Expect = 1e-016
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGH--TQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A +NRL TGD+M QW + C+LC ETR+HLFF+C +T IW L +
Sbjct: 505 LAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENLAKNIYKAKF 564
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ +WS + S+ + ++ + + FQA+I+ W ERNGRR+ +SA ++ + +
Sbjct: 565 STNWSTILTSVSTTWRNRTESFLARYIFQATIHTIWHERNGRRHGERSNSATHLIWWLDK 624
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
+M+N++ + GD ++ L W
Sbjct: 625 QMRNQISTI-AASGDHRYDKPLQLW 648
>gi|12321684|gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis
thaliana]
Length = 629
Score = 89 bits (219), Expect = 1e-015
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRI 474
+A RNRL TG RM+ W G C C ETRDHLFF+C + IWT + L R
Sbjct: 481 LALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIAKNVLQHRF 540
Query: 473 NPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYR 294
+ DW + + + +I + + + FQ +++ W+ERN RR+ P ++ + + +
Sbjct: 541 STDWQTIVNYISETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGEEPRTSANLISWMDK 600
Query: 293 EMQNRLIALHHGKGDGVLNEGLNRW 219
+++N+L ++ GD GL W
Sbjct: 601 QIRNQL-SIIISTGDRRYENGLQVW 624
>gi|9755374|gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 87 bits (215), Expect = 3e-015
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Frame = -2
Query: 647 VACRNRLDTGDRMRQWGHTQI----CLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAG 480
+A NRL TGDRM +W + C+LC +T +HLFF+C + T+W L
Sbjct: 722 LAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKT 781
Query: 479 RINPDWSRTIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSV 300
R + WS + + + +++ + + FQA+IY WRERNGRR+ P++ + +
Sbjct: 782 RYSTRWSHLLTHISTHFQDRVEGFLTRYIFQATIYHVWRERNGRRHDAAPNTPATVIGWI 841
Query: 299 YREMQNRLIALHHGKGDGVLNEGLNRW 219
++ +N++ + GD ++ W
Sbjct: 842 DKQTRNQITIIRQ-SGDRRYDKAFQAW 867
>gi|9802599|gb|AAF99801.1|AC012463_18 T2E6.13 [Arabidopsis thaliana]
Length = 165
Score = 85 bits (208), Expect = 2e-014
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Frame = -2
Query: 629 LDTGDRMRQW--GHTQICLLCGEPDETRDHLFFACPFTYTIWTMLMAPFLAGRINPDWSR 456
L TGDRM+ W G C C ETRDHLFF+C + +IWT + L R + DW
Sbjct: 23 LSTGDRMQFWNNGSDVKCTFCSTSIETRDHLFFSCSYASSIWTAIAKNVLQHRFSTDWQA 82
Query: 455 TIASLRNNRLPKIDTQIVKMTFQASIYWTWRERNGRRYLNPPHSAVYIARSVYREMQNRL 276
+ + + +I + + + FQ +++ W+ERN RR+ P ++ + + ++++N+L
Sbjct: 83 IVNYISETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGEEPRTSANLISWMDKQIRNQL 142
Query: 275 IALHHGKGDGVLNEGLNRW 219
++ GD GL W
Sbjct: 143 -SIIISTGDRRYENGLQVW 160
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,934,268,127,257
Number of Sequences: 15229318
Number of Extensions: 3934268127257
Number of Successful Extensions: 921802745
Number of sequences better than 0.0: 0
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