Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN34482


BLASTX 7.6.2

Query= UN34482 /QuerySize=1331
        (1330 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 ...     63   4e-009

>sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis
        thaliana GN=At1g65750 PE=3 SV=1

          Length = 620

 Score =  63 bits (152), Expect = 4e-009
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
 Frame = -2

Query: 1236 LWSGSPTQTHKAKAAWEDLCCPKDEGGLGIRKLHDSSKVFALSLTWRIFSSSASLWVSWI 1057
            LW  +  +  +    W  +C PK EGGLG+R     ++     + WR+     SLW   +
Sbjct:   74 LWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVL 133

Query: 1056 QQYLLRQNSFWDVRED-W---KGSW--IWRKL-LKLRSVAYQFIRFEVNDGHIAFFWVDD 898
            Q    ++    ++R+  W   KGSW   WR + + LR V    + +   DG    FW D 
Sbjct:  134 Q----KKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDR 189

Query:  897 WLQVGKLLDI 868
            W+    LL++
Sbjct:  190 WVSGKPLLEL 199

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,577,310,443
Number of Sequences: 518415
Number of Extensions: 136577310443
Number of Successful Extensions: 839494199
Number of sequences better than 0.0: 0