BLASTX 7.6.2
Query= UN34690 /QuerySize=1446
(1445 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 114 2e-025
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 113 4e-025
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 111 1e-024
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 84 2e-016
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 72 6e-013
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 72 8e-013
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 72 8e-013
TAIR9_protein||AT4G32420.1 | Symbols: | peptidyl-prolyl cis-tra... 53 5e-007
TAIR9_protein||AT4G32420.2 | Symbols: | peptidyl-prolyl cis-tra... 53 5e-007
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 114 bits (283), Expect = 2e-025
Identities = 76/155 (49%), Positives = 92/155 (59%), Gaps = 13/155 (8%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+PRGFGF+Q+ DP DAA+AK+ +DGY+LLGRE+TVVFAEENRKKP+EMR R R
Sbjct: 76 DPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRD--RGGRSN 133
Query: 498 NFRGRTSTRSPYGYSRSPGYSRSPNYR---RSYSRSPVYR-RSYSRSPYDERHRSSRSVS 331
F+ R RSP YSRSP R R R Y+ P R +S S SP D R+ RS S
Sbjct: 134 RFQDR--RRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSYS 191
Query: 330 -----PGDRRRSYSRSSSRSRYKSRSRSQSPGCSR 241
G R RS S +S +S RS SP +R
Sbjct: 192 RSPPHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNR 226
Score = 97 bits (241), Expect = 2e-020
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 4/71 (5%)
Frame = -2
Query: 1342 SYSPSPPR---RRYRSPSPVGHY-GARSRDPPTSLLVRNLRLDCRPDDLRRPFGRFGRLK 1175
SY+PSPPR RR RSPSP G + G+R D PTSLLVRNLR DCR +DLRRPF +FG +K
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVK 64
Query: 1174 DIYIPRNYYTG 1142
DIY+PR+YYTG
Sbjct: 65 DIYLPRDYYTG 75
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 113 bits (281), Expect = 4e-025
Identities = 75/149 (50%), Positives = 87/149 (58%), Gaps = 13/149 (8%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+PRGFGFVQ+ DP DAADAK+H+DGY+LLGRE+TVVFAEENRKKP+EMR R
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARER------G 128
Query: 498 NFRGRTSTRSP---YGYSRSPGYSRSPNYRRS---YSRSPVYRRSYSRSPYDERHRSSRS 337
R R R+P Y SRSP R + RS YS P S SP +ER+ RS
Sbjct: 129 GGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRS 188
Query: 336 VSPGDRR-RSYSRSSSRSRYKSRSRSQSP 253
S S RS + R KSRS S SP
Sbjct: 189 YSRSPASDGSRGRSLTPVRGKSRSLSPSP 217
Score = 103 bits (255), Expect = 4e-022
Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
Frame = -2
Query: 1342 SYSPSPPR---RRYRSPSPVGHYGARSRDPPTSLLVRNLRLDCRPDDLRRPFGRFGRLKD 1172
SY+PSPPR RR RSPSP G YG RSRD PTSLLVRNLR DCR +DLR+ F +FG +KD
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKD 64
Query: 1171 IYIPRNYYTG 1142
IY+PR+YYTG
Sbjct: 65 IYLPRDYYTG 74
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 111 bits (277), Expect = 1e-024
Identities = 72/148 (48%), Positives = 86/148 (58%), Gaps = 13/148 (8%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+PRGFGFVQ+ DP DAADAK+H+DGY+LLGRE+TVVFAEENRKKP+EMR R
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARER------G 128
Query: 498 NFRGRTSTRSP---YGYSRSPGYSRSPNYRRS---YSRSPVYRRSYSRSPYDERHRSSRS 337
R R R+P Y SRSP R + RS YS P S SP +ER+ RS
Sbjct: 129 GGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRS 188
Query: 336 VSPGDRRRSYSRSSSRSRYKSRSRSQSP 253
S SR S + + +SRS SP
Sbjct: 189 YSRSPASDG-SRGRSLTPVRGKSRSLSP 215
Score = 103 bits (255), Expect = 4e-022
Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
Frame = -2
Query: 1342 SYSPSPPR---RRYRSPSPVGHYGARSRDPPTSLLVRNLRLDCRPDDLRRPFGRFGRLKD 1172
SY+PSPPR RR RSPSP G YG RSRD PTSLLVRNLR DCR +DLR+ F +FG +KD
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKD 64
Query: 1171 IYIPRNYYTG 1142
IY+PR+YYTG
Sbjct: 65 IYLPRDYYTG 74
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 84 bits (207), Expect = 2e-016
Identities = 67/153 (43%), Positives = 81/153 (52%), Gaps = 17/153 (11%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
EPRGFGFV+Y +DAA+A ++ V+ GREI +VFAEENRK P EMR +
Sbjct: 86 EPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNG-----TS 140
Query: 498 NFRG---RTSTRSPYGYSRSPGYSRSPNYRRS-YSR-------SPVYR-RSYSRSPYDER 355
G RTS RSP RS SRSP R S +S+ SP R RS SRSP
Sbjct: 141 GRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRN 200
Query: 354 HRSSRSVSPGDRRRSYSRSSSRSRYKSRSRSQS 256
R +S + R + RSR SRSRS+S
Sbjct: 201 EREYKSRNCRSPREERVLTPIRSRCLSRSRSRS 233
Score = 67 bits (161), Expect = 3e-011
Identities = 37/67 (55%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Frame = -2
Query: 1330 SPPRRRYRSPSPVGHYGARSRD----PPTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYI 1163
SPPR R SRD P+ LL+RNL LD RP+DLR F RFG LKDIY+
Sbjct: 19 SPPRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYL 78
Query: 1162 PRNYYTG 1142
PRNYYTG
Sbjct: 79 PRNYYTG 85
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 72 bits (176), Expect = 6e-013
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+PRGF FV++ D DA +A+ ++ GREITVV A E+RK+P EMR ++ R
Sbjct: 86 QPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPS 145
Query: 498 NFRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSP---------YDERHRS 346
R R+ RS SRS SRSP R S SRS RSYS +P ++ + S
Sbjct: 146 GSRDRSHGRS---RSRSISRSRSPR-RPSDSRSRYRSRSYSPAPRRRGGPPRGEEDENYS 201
Query: 345 SRSVSPG 325
RS SPG
Sbjct: 202 RRSYSPG 208
Score = 72 bits (175), Expect = 8e-013
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = -2
Query: 1333 PSPPRRRYRSPSPVGHYGARSRDPPTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRN 1154
P PPRR Y G G R SLLVRN+ LDCRP++LR PF RFG ++D+YIPR+
Sbjct: 25 PPPPRRGYGGG---GGGGGRRGSSHGSLLVRNIPLDCRPEELREPFERFGPVRDVYIPRD 81
Query: 1153 YYTG 1142
YY+G
Sbjct: 82 YYSG 85
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 72 bits (175), Expect = 8e-013
Identities = 61/143 (42%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+ RGF FV+Y D+A A LDG V+ GREITV FA K + S R+V
Sbjct: 55 DSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFA----KYGPNAEKISKGRVVEPP 110
Query: 498 NFRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSSRSVSPG-D 322
R+ +RSP SRSP SRSP RRS RS RR SR Y E+ RS S D
Sbjct: 111 PKSRRSRSRSP-RRSRSPRRSRSPPRRRSPRRSRSPRRR-SRDDYREKDYRKRSRSRSYD 168
Query: 321 RRRSYSRSSSRSRYKSRSRSQSP 253
RR + R ++RSRS SP
Sbjct: 169 RRERHEEKDRDHRRRTRSRSASP 191
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 72 bits (175), Expect = 8e-013
Identities = 61/143 (42%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Frame = -3
Query: 678 EPRGFGFVQYYDPDDAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSS*RIVLLV 499
+ RGF FV+Y D+A A LDG V+ GREITV FA K + S R+V
Sbjct: 55 DSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFA----KYGPNAEKISKGRVVEPP 110
Query: 498 NFRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSSRSVSPG-D 322
R+ +RSP SRSP SRSP RRS RS RR SR Y E+ RS S D
Sbjct: 111 PKSRRSRSRSP-RRSRSPRRSRSPPRRRSPRRSRSPRRR-SRDDYREKDYRKRSRSRSYD 168
Query: 321 RRRSYSRSSSRSRYKSRSRSQSP 253
RR + R ++RSRS SP
Sbjct: 169 RRERHEEKDRDHRRRTRSRSASP 191
>TAIR9_protein||AT4G32420.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15647550-15652103 REVERSE
Length = 838
Score = 53 bits (125), Expect = 5e-007
Identities = 49/107 (45%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = -3
Query: 555 RKKPSEMRERSS*RIVLLVNFRG--RTSTRSPYGYSRSPGYSRSP--NYRRSYSRSPV-- 394
RK S RSS + V R R +RSP SR SRSP RRS SRSP+
Sbjct: 568 RKSVSRSPVRSSRKSVSRSPVRSSRRRISRSPVRSSRK-SVSRSPIRLSRRSISRSPIRL 626
Query: 393 YRRSYSRSPYDERHRSSRSVSPGDRRRSYSRSSSRSRYKSRSRSQSP 253
RRS SRSP R R SRS P RR RS R +S SRS SP
Sbjct: 627 SRRSISRSPVRGRRRISRSPVPARRRSVRPRSPPPDRRRSLSRSASP 673
>TAIR9_protein||AT4G32420.2 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15647550-15650678 REVERSE
Length = 728
Score = 53 bits (125), Expect = 5e-007
Identities = 49/107 (45%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = -3
Query: 555 RKKPSEMRERSS*RIVLLVNFRG--RTSTRSPYGYSRSPGYSRSP--NYRRSYSRSPV-- 394
RK S RSS + V R R +RSP SR SRSP RRS SRSP+
Sbjct: 458 RKSVSRSPVRSSRKSVSRSPVRSSRRRISRSPVRSSRK-SVSRSPIRLSRRSISRSPIRL 516
Query: 393 YRRSYSRSPYDERHRSSRSVSPGDRRRSYSRSSSRSRYKSRSRSQSP 253
RRS SRSP R R SRS P RR RS R +S SRS SP
Sbjct: 517 SRRSISRSPVRGRRRISRSPVPARRRSVRPRSPPPDRRRSLSRSASP 563
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,007,620,850
Number of Sequences: 33410
Number of Extensions: 18007620850
Number of Successful Extensions: 578099151
Number of sequences better than 0.0: 0
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