BLASTX 7.6.2
Query= UN34877 /QuerySize=899
(898 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297842797|ref|XP_002889280.1| hypothetical protein ARALYDRAFT... 176 4e-042
gi|15220196|ref|NP_178180.1| RNAse THREE-like protein 1 [Arabido... 169 8e-040
gi|255572781|ref|XP_002527323.1| double-stranded RNA binding pro... 112 9e-023
>gi|297842797|ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895
[Arabidopsis lyrata subsp. lyrata]
Length = 190
Score = 176 bits (446), Expect = 4e-042
Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 7/135 (5%)
Frame = +2
Query: 356 VNSFSNIRIDDPNITQGL---NHPLPKPQQQEDPKSLSK-DESKKGSAKLLLHGICTSKR 523
++S SNI+I DPN T+ + N +PKP++ K SK DESK+GSAK +LH IC SKR
Sbjct: 51 ISSVSNIQI-DPNSTRSITQENKLVPKPEEDTTTKPNSKGDESKRGSAKSVLHEICASKR 109
Query: 524 WKPPLYDCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAAEGAL 703
W+PP+Y+CC V GPCHLRLFTYKVVVEI +SSG TVLECFGDP+RNKKAAAEHAAEGAL
Sbjct: 110 WRPPVYECCKVDGPCHLRLFTYKVVVEIIESSG-KTVLECFGDPRRNKKAAAEHAAEGAL 168
Query: 704 WYLNHVKGK-SDKAA 745
WYL HVK K DKAA
Sbjct: 169 WYLEHVKAKPEDKAA 183
>gi|15220196|ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thaliana]
Length = 198
Score = 169 bits (426), Expect = 8e-040
Identities = 84/133 (63%), Positives = 103/133 (77%), Gaps = 10/133 (7%)
Frame = +2
Query: 356 VNSFSNIRIDDPNITQGLN-----HPLPKPQQQEDPKSLSKDE---SKKGSAKLLLHGIC 511
++SFSNI+I DPN T+ ++ P P + K +SKD+ +++GSAK +LH +C
Sbjct: 65 ISSFSNIQI-DPNSTRSISLEKKLAPKPDEEHTTTTKPISKDDESKTRRGSAKSVLHEMC 123
Query: 512 TSKRWKPPLYDCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAA 691
SKRW+PP+Y+CCNV GPCHLRLFTYKV+VEIRDSSG TVLECFGDP+R KKAAAEHAA
Sbjct: 124 ASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSG-KTVLECFGDPRRKKKAAAEHAA 182
Query: 692 EGALWYLNHVKGK 730
EGALWYL HVK K
Sbjct: 183 EGALWYLEHVKTK 195
>gi|255572781|ref|XP_002527323.1| double-stranded RNA binding protein, putative
[Ricinus communis]
Length = 219
Score = 112 bits (279), Expect = 9e-023
Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = +2
Query: 467 ESKKGSAKLLLHGICTSKRWKPPLYDCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECF 646
E K+ SAK LH IC + WKPPLY+CC GPCH RLFT+KV+VE+ VLEC+
Sbjct: 124 ELKRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEM--IGAEYIVLECY 181
Query: 647 GDPKRNKKAAAEHAAEGALWYLNHV 721
G PK KK AAEHAAEGALWYL H+
Sbjct: 182 GIPKIKKKTAAEHAAEGALWYLKHL 206
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,934,268,127,257
Number of Sequences: 15229318
Number of Extensions: 3934268127257
Number of Successful Extensions: 921802745
Number of sequences better than 0.0: 0
|