BLASTX 7.6.2

Query= UN34877 /QuerySize=899
        (898 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G80650.1 | Symbols: RTL1 | RTL1 (RNase three-l...    169   3e-042
TAIR9_protein||AT4G00420.2 | Symbols:  | double-stranded RNA-bin...     96   4e-020
TAIR9_protein||AT4G00420.3 | Symbols:  | double-stranded RNA-bin...     96   4e-020
TAIR9_protein||AT4G00420.1 | Symbols:  | double-stranded RNA-bin...     95   5e-020
TAIR9_protein||AT5G20320.1 | Symbols: DCL4, ATDCL4 | DCL4 (DICER...     93   2e-019

>TAIR9_protein||AT1G80650.1 | Symbols: RTL1 | RTL1 (RNase three-like protein 1);
        RNA binding / double-stranded RNA binding | chr1:30314609-30315600
        FORWARD

          Length = 199

 Score =  169 bits (426), Expect = 3e-042
 Identities = 84/133 (63%), Positives = 103/133 (77%), Gaps = 10/133 (7%)
 Frame = +2

Query: 356 VNSFSNIRIDDPNITQGLN-----HPLPKPQQQEDPKSLSKDE---SKKGSAKLLLHGIC 511
           ++SFSNI+I DPN T+ ++      P P  +     K +SKD+   +++GSAK +LH +C
Sbjct:  65 ISSFSNIQI-DPNSTRSISLEKKLAPKPDEEHTTTTKPISKDDESKTRRGSAKSVLHEMC 123

Query: 512 TSKRWKPPLYDCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAA 691
            SKRW+PP+Y+CCNV GPCHLRLFTYKV+VEIRDSSG  TVLECFGDP+R KKAAAEHAA
Sbjct: 124 ASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSG-KTVLECFGDPRRKKKAAAEHAA 182

Query: 692 EGALWYLNHVKGK 730
           EGALWYL HVK K
Sbjct: 183 EGALWYLEHVKTK 195

>TAIR9_protein||AT4G00420.2 | Symbols:  | double-stranded RNA-binding domain
        (DsRBD)-containing protein | chr4:181518-182629 REVERSE

          Length = 191

 Score =  96 bits (236), Expect = 4e-020
 Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
 Frame = +2

Query: 371 NIRIDDPNITQGLNHPLPKPQQQEDP---KSLSKDESKKGSAKLLLHGICTSKRWKPPLY 541
           N+   +PN T   N  + +P+    P   +  +++E+++ SAK  L+ +C+ + WK PLY
Sbjct:  45 NVTQMEPNFTLE-NTLVSEPEADLRPHTTEPTTEEETQRSSAKSQLYNLCSVRHWKAPLY 103

Query: 542 DCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAAEGALWYLNHV 721
           +     GPCH+++FT KV VE+++ S   TVLECFG+P+  KK AAE AAE ALWYL +V
Sbjct: 104 EYI-AEGPCHMKIFTGKVTVEMKEDS-RITVLECFGNPQYKKKIAAEQAAEAALWYLKNV 161

>TAIR9_protein||AT4G00420.3 | Symbols:  | double-stranded RNA-binding domain
        (DsRBD)-containing protein | chr4:181518-182408 REVERSE

          Length = 169

 Score =  96 bits (236), Expect = 4e-020
 Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
 Frame = +2

Query: 371 NIRIDDPNITQGLNHPLPKPQQQEDP---KSLSKDESKKGSAKLLLHGICTSKRWKPPLY 541
           N+   +PN T   N  + +P+    P   +  +++E+++ SAK  L+ +C+ + WK PLY
Sbjct:  23 NVTQMEPNFTLE-NTLVSEPEADLRPHTTEPTTEEETQRSSAKSQLYNLCSVRHWKAPLY 81

Query: 542 DCCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAAEGALWYLNHV 721
           +     GPCH+++FT KV VE+++ S   TVLECFG+P+  KK AAE AAE ALWYL +V
Sbjct:  82 EYI-AEGPCHMKIFTGKVTVEMKEDS-RITVLECFGNPQYKKKIAAEQAAEAALWYLKNV 139

>TAIR9_protein||AT4G00420.1 | Symbols:  | double-stranded RNA-binding domain
        (DsRBD)-containing protein | chr4:181518-182629 REVERSE

          Length = 190

 Score =  95 bits (235), Expect = 5e-020
 Identities = 51/119 (42%), Positives = 76/119 (63%), Gaps = 5/119 (4%)
 Frame = +2

Query: 371 NIRIDDPNITQGLNHPLPKPQQQEDPKSL--SKDESKKGSAKLLLHGICTSKRWKPPLYD 544
           N+   +PN T   N  + +P+    P +   + +E+++ SAK  L+ +C+ + WK PLY+
Sbjct:  45 NVTQMEPNFTLE-NTLVSEPEADLRPHTTEPTTEETQRSSAKSQLYNLCSVRHWKAPLYE 103

Query: 545 CCNVHGPCHLRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAAEGALWYLNHV 721
                GPCH+++FT KV VE+++ S   TVLECFG+P+  KK AAE AAE ALWYL +V
Sbjct: 104 YI-AEGPCHMKIFTGKVTVEMKEDS-RITVLECFGNPQYKKKIAAEQAAEAALWYLKNV 160

>TAIR9_protein||AT5G20320.1 | Symbols: DCL4, ATDCL4 | DCL4 (DICER-LIKE 4); RNA
        binding / protein binding / ribonuclease III | chr5:6859571-6869068
        REVERSE

          Length = 1703

 Score =  93 bits (229), Expect = 2e-019
 Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
 Frame = +2

Query:  395 ITQGLNHPLPKPQQQEDPKSLSKDESKKG-SAKLLLHGICTSKRWKPPLYDCCNVHGPCH 571
            I +GL     K + +   K++ K       +AK LLH  C +  WKPP ++CC   GP H
Sbjct: 1591 IRRGLPQAPSKTEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGH 1650

Query:  572 LRLFTYKVVVEIRDSSGTTTVLECFGDPKRNKKAAAEHAAEGALWYLNH 718
            L+ F YKV++E+ D+   T  LEC+G+ +  KK AAEHAA+ A+W L H
Sbjct: 1651 LKSFVYKVILEVEDAPNMT--LECYGEARATKKGAAEHAAQAAIWCLKH 1697

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,049,912,803
Number of Sequences: 33410
Number of Extensions: 18049912803
Number of Successful Extensions: 578112147
Number of sequences better than 0.0: 0