BLASTX 7.6.2
Query= UN34892 /QuerySize=775
(774 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 247 8e-066
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 247 8e-066
TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear r... 247 8e-066
TAIR9_protein||AT5G46730.2 | Symbols: | glycine-rich protein | ... 63 2e-010
TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY O... 57 9e-009
TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein | ... 53 2e-007
TAIR9_protein||AT1G65440.1 | Symbols: GTB1 | GTB1; RNA binding /... 50 1e-006
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 49 4e-006
TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein | ... 48 5e-006
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 247 bits (629), Expect = 8e-066
Identities = 137/181 (75%), Positives = 146/181 (80%), Gaps = 13/181 (7%)
Frame = -2
Query: 770 QTQSYGGSGSNAGFGRPFSPGYA---GRYGSQIESGG---GNGSVLNAAAKNNLWGNGGG 609
QTQ+Y GSGS+ GFGRPFSPGYA GR+GSQ+ESGG GNGSVLNAA KN+LWGN
Sbjct: 259 QTQNY-GSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGN--- 314
Query: 608 GGLGYMSNSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVHVG 429
GGLGYMSNS ISRSSF+GNSGMSSLGSIGD++G G GGVGLEAMRGVHVG
Sbjct: 315 GGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVG 374
Query: 428 GYSSSGGSSSLEADSLYSDSAWLSSLPGKAEERLGMGAFDFMSKGPAGYINRQPNGGIAA 249
GYSS GSS LEADSLYSDS WL SLP KAEE LGMG DFMS+GPAGYINRQPNGGIAA
Sbjct: 375 GYSS--GSSILEADSLYSDSMWL-SLPAKAEEGLGMGPLDFMSRGPAGYINRQPNGGIAA 431
Query: 248 * 246
*
Sbjct: 432 * 432
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 247 bits (629), Expect = 8e-066
Identities = 137/181 (75%), Positives = 146/181 (80%), Gaps = 13/181 (7%)
Frame = -2
Query: 770 QTQSYGGSGSNAGFGRPFSPGYA---GRYGSQIESGG---GNGSVLNAAAKNNLWGNGGG 609
QTQ+Y GSGS+ GFGRPFSPGYA GR+GSQ+ESGG GNGSVLNAA KN+LWGN
Sbjct: 259 QTQNY-GSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGN--- 314
Query: 608 GGLGYMSNSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVHVG 429
GGLGYMSNS ISRSSF+GNSGMSSLGSIGD++G G GGVGLEAMRGVHVG
Sbjct: 315 GGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVG 374
Query: 428 GYSSSGGSSSLEADSLYSDSAWLSSLPGKAEERLGMGAFDFMSKGPAGYINRQPNGGIAA 249
GYSS GSS LEADSLYSDS WL SLP KAEE LGMG DFMS+GPAGYINRQPNGGIAA
Sbjct: 375 GYSS--GSSILEADSLYSDSMWL-SLPAKAEEGLGMGPLDFMSRGPAGYINRQPNGGIAA 431
Query: 248 * 246
*
Sbjct: 432 * 432
>TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304106
REVERSE
Length = 372
Score = 247 bits (629), Expect = 8e-066
Identities = 137/181 (75%), Positives = 146/181 (80%), Gaps = 13/181 (7%)
Frame = -2
Query: 770 QTQSYGGSGSNAGFGRPFSPGYA---GRYGSQIESGG---GNGSVLNAAAKNNLWGNGGG 609
QTQ+Y GSGS+ GFGRPFSPGYA GR+GSQ+ESGG GNGSVLNAA KN+LWGN
Sbjct: 199 QTQNY-GSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGN--- 254
Query: 608 GGLGYMSNSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVHVG 429
GGLGYMSNS ISRSSF+GNSGMSSLGSIGD++G G GGVGLEAMRGVHVG
Sbjct: 255 GGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVG 314
Query: 428 GYSSSGGSSSLEADSLYSDSAWLSSLPGKAEERLGMGAFDFMSKGPAGYINRQPNGGIAA 249
GYSS GSS LEADSLYSDS WL SLP KAEE LGMG DFMS+GPAGYINRQPNGGIAA
Sbjct: 315 GYSS--GSSILEADSLYSDSMWL-SLPAKAEEGLGMGPLDFMSRGPAGYINRQPNGGIAA 371
Query: 248 * 246
*
Sbjct: 372 * 372
>TAIR9_protein||AT5G46730.2 | Symbols: | glycine-rich protein |
chr5:18964030-18964902 FORWARD
Length = 247
Score = 63 bits (152), Expect = 2e-010
Identities = 46/119 (38%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Frame = -2
Query: 755 GGSGSNAGFGRPFSPG--YAGRYGSQIESGGGNG-SVLNAAAKNNLWGNGGGGGLGYMSN 585
GG GS G G + G +A YG+ GGG G S A G+GGGGG G
Sbjct: 123 GGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGG---- 178
Query: 584 SLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVHVGGYSSSGG 408
S +G SG S G G +G +GGY GGGG G + G H GG S GG
Sbjct: 179 ---SAGGAHGGSGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGGG--SGGG 232
Score = 54 bits (128), Expect = 1e-007
Identities = 45/127 (35%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Frame = -2
Query: 773 GQTQSYGGSGSNAGFGRPFSPGYAGRYGSQIESGGGNGSVLNAAAKN-NLWGNGGGGGLG 597
G S G G G+G + G+AG G SGGG GS A ++ + +GNG G G G
Sbjct: 98 GGYASGAGEGGGGGYGGA-AGGHAGGGGG--GSGGGGGSAYGAGGEHASGYGNGAGEG-G 153
Query: 596 YMSNSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGG-GGGVGLEAMRGVHVGGYS 420
S ++ G G G G + G GY S GG GGG G A G GG
Sbjct: 154 GAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGSGGGEGGGYGGGAAGGYGGGGGG 213
Query: 419 SSGGSSS 399
GG S
Sbjct: 214 GEGGGGS 220
>TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY ORGANIZED
TRIBUTARIES 1) | chr2:15165468-15166235 FORWARD
Length = 256
Score = 57 bits (137), Expect = 9e-009
Identities = 40/117 (34%), Positives = 45/117 (38%), Gaps = 3/117 (2%)
Frame = -2
Query: 755 GGSGSNAGFGRPFSPGYAGRYGSQIESGGGNGSVLNAAAKNNLWGNGGGGGLGYMSNSLI 576
GG G AG G PG G YG GGG G A + G GGG G G
Sbjct: 86 GGHGGGAGGGGGGGPG--GGYGGGSGEGGGAG-YGGGEAGGHGGGGGGGAGGGGGGGGGA 142
Query: 575 SRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVHVGGYSSSGGS 405
+ G G + G G GG GGGG G G H GGY + GG+
Sbjct: 143 HGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGA 199
>TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein |
chr5:18964030-18964902 FORWARD
Length = 291
Score = 53 bits (125), Expect = 2e-007
Identities = 47/130 (36%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Frame = -2
Query: 773 GQTQSYGGSGSNAGFGRPFSPGYAGRYGSQIESGGGNGSVLNAAAKN-NLWGNGG--GGG 603
G S G G G+G + G+AG G SGGG GS A ++ + +GNG GGG
Sbjct: 98 GGYASGAGEGGGGGYGGA-AGGHAGGGGG--GSGGGGGSAYGAGGEHASGYGNGAGEGGG 154
Query: 602 LGYMSNSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVH--VG 429
G + G+ G GS G + G S GG EGGG G G G H G
Sbjct: 155 AGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGG--GEGGGAGGG-----GSHGGAG 207
Query: 428 GYSSSGGSSS 399
GY GG S
Sbjct: 208 GYGGGGGGGS 217
>TAIR9_protein||AT1G65440.1 | Symbols: GTB1 | GTB1; RNA binding / hydrolase,
acting on ester bonds / transcription elongation regulator |
chr1:24306945-24314327 REVERSE
Length = 1648
Score = 50 bits (119), Expect = 1e-006
Identities = 45/157 (28%), Positives = 59/157 (37%), Gaps = 14/157 (8%)
Frame = -2
Query: 773 GQTQSYGGSGSNAGFGRPFSPGYAGRYGSQIESGGGNGSVLNAAAKNNLWGNGGGGGLGY 594
G + YGG G G GR S + G G+ + + WGN GGGG G
Sbjct: 1480 GAPRPYGGRGRGRGRGR------RDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGS 1533
Query: 593 MS-------NSLISRSSFNGNSGMSSLGSIGDSFGRSRSGGYRSEGGGGGVGLEAMRGVH 435
S S S +G + GS G G SGG+ ++ GG + G
Sbjct: 1534 ESAGKKTGGGSTGGWGSESGGNKSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSG 1593
Query: 434 VGGYSSSGGSSSLEADSLYSDSAWLSSLPGKAEERLG 324
GG S G+ S S +D W S GK + G
Sbjct: 1594 SGGGGSDWGNESGGKKS-SADGGWGSESGGKKSDGEG 1629
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 49 bits (114), Expect = 4e-006
Identities = 42/147 (28%), Positives = 57/147 (38%), Gaps = 7/147 (4%)
Frame = -2
Query: 695 YGSQIESGGGNGSVLNAAAKNNLWGNGG-GGGLGYMSNSLISRSSFNGNSGMSSLGSIGD 519
Y + SGGG G G+GG GGG G S + G +G G+ G
Sbjct: 115 YANDRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGS----GGYGGGAGGYG-GNSGG 169
Query: 518 SFGRSRSGGYRSEGGGGGVGLEAMRGVHVGGYSSSGGSSSLEADSLYSDSAWLSSLPGKA 339
+G + +GGY G GG G G GGY SSGG S ++ S+ + G
Sbjct: 170 GYGGNAAGGYGGSGAGGYGGDATGHGGAGGGYGSSGGFGS-SGNTYGEGSSASAGAVGDY 228
Query: 338 EERLGMGAFDFMSKGPAGYINRQPNGG 258
G G+ + G+ GG
Sbjct: 229 NGSSGYGSANTYGSSNGGFAGDSQFGG 255
>TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein |
chr4:14889246-14889734 REVERSE
Length = 163
Score = 48 bits (113), Expect = 5e-006
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Frame = -2
Query: 755 GGSGSNAGFGRPFSPGYAGR-YGSQIESGGGNGSVLNAAAKNNLWGNGGGGG-LGYMSNS 582
GG G+ G G G +G G+ SGGG S ++++ ++ +GGGGG G + S
Sbjct: 38 GGIGAGIGIGIGIGGGGSGSGAGAGSGSGGGGSSSSSSSSSSSSSSSGGGGGDAGSEAGS 97
Query: 581 LISRSSFNGNSGMSSLGSIGDSFGR-SRSGGYRSEGGGGGVGLEAMRGVHVG-GYSSSGG 408
+ +G+ G S G GR S GG GGGGG G G G GY GG
Sbjct: 98 YAGSHAGSGSGGRS-----GSGRGRGSGGGGGHGGGGGGGGGRGGGGGSGNGEGYGEGGG 152
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,049,912,803
Number of Sequences: 33410
Number of Extensions: 18049912803
Number of Successful Extensions: 578112147
Number of sequences better than 0.0: 0
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