Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN34956


BLASTX 7.6.2

Query= UN34956 /QuerySize=534
        (533 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|22330398|ref|NP_683464.1| CLAVATA3/ESR-related protein 14 [Ar...    104   1e-020
gi|297837073|ref|XP_002886418.1| hypothetical protein ARALYDRAFT...    102   4e-020

>gi|22330398|ref|NP_683464.1| CLAVATA3/ESR-related protein 14 [Arabidopsis
        thaliana]

          Length = 80

 Score =  104 bits (257), Expect = 1e-020
 Identities = 53/84 (63%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = +2

Query:  59 MKLWSSRLSFILVVIFFFAGLHIFSDARKLPSMTAVEEFQEQFRQARFDGERILSEGNTG 238
           MK+WS RLSF++V+IF  AGLH  S  RKLPSMT  EEFQ    +  FDG+RILSE    
Sbjct:   1 MKVWSQRLSFLIVMIFILAGLHSSSAGRKLPSMTTTEEFQ----RLSFDGKRILSEVTAD 56

Query: 239 KKNDEIYGVSVREVPDGPNPLHNK 310
           KK D IYG S R VP GPNPLHNK
Sbjct:  57 KKYDRIYGASARLVPKGPNPLHNK 80

>gi|297837073|ref|XP_002886418.1| hypothetical protein ARALYDRAFT_893125
        [Arabidopsis lyrata subsp. lyrata]

          Length = 80

 Score =  102 bits (252), Expect = 4e-020
 Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
 Frame = +2

Query:  59 MKLWSSRLSFILVVIFFFAGLHIFSDARKLPSMTAVEEFQEQFRQARFDGERILSEGNTG 238
           MK+WS RLSF++V+I  F+GLH    +RKLPSMT  EEFQ    +  FDG+R+LSE   G
Sbjct:   1 MKIWSQRLSFLIVMISIFSGLHFSLASRKLPSMTTTEEFQ----RLSFDGKRMLSEVTAG 56

Query: 239 KKNDEIYGVSVREVPDGPNPLHNK 310
           +K D IYG S R VP+GPNPLHNK
Sbjct:  57 EKYDPIYGASARLVPEGPNPLHNK 80

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,948,232,901,940
Number of Sequences: 15229318
Number of Extensions: 3948232901940
Number of Successful Extensions: 930432217
Number of sequences better than 0.0: 0