BLASTX 7.6.2
Query= UN35342 /QuerySize=746
(745 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G66890.1 | Symbols: | FUNCTIONS IN: molecular... 219 2e-057
TAIR9_protein||AT5G16200.1 | Symbols: | 50S ribosomal protein-r... 105 3e-023
TAIR9_protein||AT1G68430.1 | Symbols: | unknown protein | chr1:... 55 4e-008
>TAIR9_protein||AT1G66890.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: 50S
ribosomal protein-related (TAIR:AT5G16200.1); Has 14 Blast hits to 14
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:24957614-24958090 FORWARD
Length = 159
Score = 219 bits (556), Expect = 2e-057
Identities = 119/168 (70%), Positives = 127/168 (75%), Gaps = 12/168 (7%)
Frame = +1
Query: 76 MSLQKFKLLATHCSTVAESPTRSPVVHLRRRKTLRLLLTRSSDRWRSPEIQNNGEELTGS 255
MSLQKFKLLATHCSTVAESPTRSPV+HLRRRKTLRLLLTRSSDRWR PEIQNN +E +
Sbjct: 1 MSLQKFKLLATHCSTVAESPTRSPVIHLRRRKTLRLLLTRSSDRWRLPEIQNNVDESKKT 60
Query: 256 DGARGLSGKRDKIRSRRKLRELFVSSPPVEEGQRRGGGGGDARNGTERAL---VPVNGVD 426
D KR KIRS RKL +LFVSSPP EE GGGGGD E + VPVNGV
Sbjct: 61 D-------KRGKIRSSRKLGDLFVSSPPFEES--GGGGGGDKGTKMEVEMERDVPVNGVS 111
Query: 427 TNGGVGEESTGRRMGLNGATRPMLSGTLRCRLLRRAWRPVLVTIPEQ* 570
N G GEE T RR+G NG+ RPM S TLRCRLLRR+WRPVLVTIPEQ*
Sbjct: 112 NNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPEQ* 159
>TAIR9_protein||AT5G16200.1 | Symbols: | 50S ribosomal protein-related |
chr5:5289659-5290150 REVERSE
Length = 164
Score = 105 bits (261), Expect = 3e-023
Identities = 74/171 (43%), Positives = 98/171 (57%), Gaps = 20/171 (11%)
Frame = +1
Query: 82 LQKFKLLATHCSTVAE-------SPTRSPVVHLRRRKTLRLLLTRSSDRWRSPEIQNNGE 240
L KFKL A H S A SPT+SPV +LRRRKTLR+L +SSD R ++ E
Sbjct: 6 LHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRRKTLRMLFDKSSDS-RRRNLRQILE 64
Query: 241 ELTGSDGARGLSGKRDKIRSRRKLRELFVSSP-PVEEGQRRGGGGGDARNGTERALVPVN 417
E SDG G + + +RRKLREL V+SP P +G+ G G+ R+ + P+N
Sbjct: 65 ESPESDGNSGNKKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGEERS----EISPLN 120
Query: 418 GVDTNGGVGEESTGRRMGLNGATRPMLSGTLRCRLLRRAWRPVLVTIPEQ* 570
T+ G G E T RR G +G+ + + R R+LR+ WRPVLV+IPEQ*
Sbjct: 121 --VTSNGDGRELTARRFGSSGSVQ-----SFRLRILRKPWRPVLVSIPEQ* 164
>TAIR9_protein||AT1G68430.1 | Symbols: | unknown protein |
chr1:25654989-25655429 REVERSE
Length = 147
Score = 55 bits (131), Expect = 4e-008
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 26/101 (25%)
Frame = +1
Query: 79 SLQKFKLLATHCSTVAESPTR------SPVVHLRRRK-TLRLLLTRSSD--RWRSPEIQN 231
+LQ+FK L T C A+SPTR SP+V LRR+K TL++LL+ +S R + P I +
Sbjct: 3 TLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQLRRKKTTLKMLLSLASPSRREQQPLIHH 62
Query: 232 NGEELTGSDGARGLSGKRDKIRSRRKLRELFVSSPPVEEGQ 354
+ +++ G RKL++LFVSS EE Q
Sbjct: 63 HHKDVAG-----------------RKLKDLFVSSSSAEEEQ 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,231,640,213
Number of Sequences: 33410
Number of Extensions: 18231640213
Number of Successful Extensions: 583666311
Number of sequences better than 0.0: 0
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