BLASTX 7.6.2
Query= UN35489 /QuerySize=1055
(1054 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata su... 354 2e-095
gi|15221071|ref|NP_172630.1| RNA recognition motif-containing pr... 344 1e-092
gi|30682335|ref|NP_849641.1| RNA recognition motif-containing pr... 344 1e-092
gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana] 344 1e-092
gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabido... 338 1e-090
gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, p... 256 7e-066
gi|224078632|ref|XP_002305583.1| predicted protein [Populus tric... 255 9e-066
gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein... 243 6e-062
gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT... 237 3e-060
gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifol... 235 2e-059
gi|293337265|ref|NP_001168324.1| hypothetical protein LOC1003820... 233 5e-059
gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare ... 230 4e-058
gi|212722596|ref|NP_001131852.1| hypothetical protein LOC1001932... 229 7e-058
gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding prote... 224 3e-056
gi|108709398|gb|ABF97193.1| RNA recognition motif family protein... 224 3e-056
gi|225435468|ref|XP_002285479.1| PREDICTED: hypothetical protein... 223 6e-056
gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vini... 223 6e-056
gi|224104133|ref|XP_002313332.1| predicted protein [Populus tric... 215 1e-053
gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, p... 215 1e-053
gi|108706453|gb|ABF94248.1| RNA recognition motif family protein... 213 6e-053
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 354 bits (907), Expect = 2e-095
Identities = 167/207 (80%), Positives = 179/207 (86%), Gaps = 7/207 (3%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQPPPY-----AAPPPQMWNPQ--APPPSQPMTA 203
M PPPGG+LPHH PPPSAQQ YGYQQP PY A PPPQMWNPQ APP +QPMT
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPSPYGIAGAAPPPPQMWNPQAAAPPSAQPMTV 60
Query: 204 DEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAER 383
DEIRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVE YGFIEF SHAAAER
Sbjct: 61 DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAER 120
Query: 384 ALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKAS 563
LQT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+AS
Sbjct: 121 VLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRAS 180
Query: 564 HPSVKDAKVVIDRATGRTKGYGFVRLS 644
+PSVK AKVVIDRATGRTKGYGFVR S
Sbjct: 181 YPSVKGAKVVIDRATGRTKGYGFVRFS 207
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 405
Score = 344 bits (882), Expect = 1e-092
Identities = 164/205 (80%), Positives = 175/205 (85%), Gaps = 5/205 (2%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADE 209
M PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADE
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADE 60
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
IRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVE YGFIEF SHAAAER L
Sbjct: 61 IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
QT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+AS+P
Sbjct: 121 QTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
SVK AKVVIDR TGRTKGYGFVR S
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFS 205
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 306
Score = 344 bits (882), Expect = 1e-092
Identities = 164/205 (80%), Positives = 175/205 (85%), Gaps = 5/205 (2%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADE 209
M PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADE
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADE 60
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
IRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVE YGFIEF SHAAAER L
Sbjct: 61 IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
QT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+AS+P
Sbjct: 121 QTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
SVK AKVVIDR TGRTKGYGFVR S
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFS 205
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 344 bits (882), Expect = 1e-092
Identities = 164/205 (80%), Positives = 175/205 (85%), Gaps = 5/205 (2%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADE 209
M PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADE
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADE 60
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
IRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVE YGFIEF SHAAAER L
Sbjct: 61 IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
QT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+AS+P
Sbjct: 121 QTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
SVK AKVVIDR TGRTKGYGFVR S
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFS 205
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 338 bits (866), Expect = 1e-090
Identities = 161/201 (80%), Positives = 173/201 (86%), Gaps = 5/201 (2%)
Frame = +3
Query: 57 PPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADEIRTL 221
PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADEIRTL
Sbjct: 4 PPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADEIRTL 63
Query: 222 WIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYN 401
WIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVE YGFIEF SHAAAER LQT+N
Sbjct: 64 WIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFN 123
Query: 402 STPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVKD 581
+ P+P PDQLFRL WASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+AS+PSVK
Sbjct: 124 NAPIPSFPDQLFRLXWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYPSVKG 183
Query: 582 AKVVIDRATGRTKGYGFVRLS 644
AKVVI+R TGRTKGYGFVR S
Sbjct: 184 AKVVINRVTGRTKGYGFVRFS 204
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 430
Score = 256 bits (652), Expect = 7e-066
Identities = 134/203 (66%), Positives = 150/203 (73%), Gaps = 13/203 (6%)
Frame = +3
Query: 48 QHPPPPGGL----LPHHVPPPSAQQHYGYQQP--PPYAAPPPQMWNPQAPPPSQPMTADE 209
Q PP P + LP PPP A +G+ Q PP AAP Q PSQP ADE
Sbjct: 34 QAPPAPYMMMMPPLPQPQPPPPAGM-WGHHQASMPPTAAP-----QQQQQQPSQPTNADE 87
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
+RTLWIGDLQ+WMDE+++ SCFAHTGEV SVKVIRNKQT QVE YGFIEF SH AER L
Sbjct: 88 VRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERIL 147
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
QTYN TP+P +Q FRLNWAS GDKRDD+PD+TIFVGDLAADVTDY+L +TF+ +P
Sbjct: 148 QTYNGTPMPN-GEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYP 206
Query: 570 SVKDAKVVIDRATGRTKGYGFVR 638
SVK AKVVIDR TGRTKGYGFVR
Sbjct: 207 SVKGAKVVIDRLTGRTKGYGFVR 229
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 255 bits (651), Expect = 9e-066
Identities = 129/190 (67%), Positives = 143/190 (75%), Gaps = 12/190 (6%)
Frame = +3
Query: 90 PPPSAQQHYGYQQPPPYAAPPPQMWNPQAPPPSQ-------PMTADEIRTLWIGDLQFWM 248
PPP AQ Q PPP+ Q PPP Q P TADE+RTLWIGDLQ+WM
Sbjct: 6 PPPMAQT----QPPPPHMWAQHQAHQASIPPPQQQQGQGQPPATADEVRTLWIGDLQYWM 61
Query: 249 DESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPD 428
DE+++ SCFAHTGEV SVK+IRNKQTSQ+E YGFIE SH AAER LQTYN TP+P +
Sbjct: 62 DENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQTYNGTPMPN-GE 120
Query: 429 QLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRAT 608
Q FRLNWAS GDKRDDSPD+TIFVGDLAADVTD++L ETF+A PSVK AKVVIDR T
Sbjct: 121 QNFRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLT 180
Query: 609 GRTKGYGFVR 638
GRTKGYGFVR
Sbjct: 181 GRTKGYGFVR 190
>gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein, partial
[Vitis vinifera]
Length = 265
Score = 243 bits (618), Expect = 6e-062
Identities = 126/198 (63%), Positives = 151/198 (76%), Gaps = 13/198 (6%)
Frame = +3
Query: 48 QHPPPPGGLLPHHVPPPSAQQHYGYQQPPPYAAPPPQMWNPQAPPPSQPMTADEIRTLWI 227
Q PPP PH V PP + QQP P+ P PQ PQ P+QP +ADE+RTLWI
Sbjct: 38 QQPPP-----PHQVAPP---PQHPPQQPQPH--PHPQQQMPQY-QPAQPASADEVRTLWI 86
Query: 228 GDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNST 407
GDLQ+WMDE+++ CFAHTGEV SVK+IRNKQT+Q+E YGFIEF+S AAAER LQTYN +
Sbjct: 87 GDLQYWMDENYINGCFAHTGEVTSVKLIRNKQTNQLEGYGFIEFISRAAAERILQTYNGS 146
Query: 408 PVPGLPDQLFRLNWASLGSGDKR-DDSPDYTIFVGDLAADVTDYVLLETFKASHPSVKDA 584
+P + +Q FRLNWAS G G+KR D++PD+TIFVGDLA+DVTDY+L ETF+ +PSVK A
Sbjct: 147 LMPNV-EQNFRLNWASFGVGEKRPDNTPDFTIFVGDLASDVTDYMLQETFRVHYPSVKGA 205
Query: 585 KVVIDRATGRTKGYGFVR 638
KVV DR T RTKGYGFVR
Sbjct: 206 KVVTDRLTSRTKGYGFVR 223
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170
[Sorghum bicolor]
Length = 409
Score = 237 bits (603), Expect = 3e-060
Identities = 120/203 (59%), Positives = 145/203 (71%), Gaps = 5/203 (2%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQPPP--YAAPPPQMWNPQAPPPSQPMTADEIRT 218
M PPPP H PPP Q Y PPP + PPPQ AP PS DE RT
Sbjct: 15 MAPPPPPQYYQAGH-PPPPPPQFYQAGPPPPAMWGQPPPQAAPAPAPAPSGGGAGDEART 73
Query: 219 LWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTY 398
LWIGDLQ+WMDE++LYSCF+ GEV+SVK+IRNKQT Q E YGFIEF +HA AE+ LQ Y
Sbjct: 74 LWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVLQNY 133
Query: 399 NSTPVPGLPDQLFRLNWASLGSGDKR-DDSPDYTIFVGDLAADVTDYVLLETFKASHPSV 575
N +P + +Q F+LNWA+ G+G+KR DD DYTIFVGDLA+DVTD++L +TFK+ +PSV
Sbjct: 134 NGQMMPNV-NQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSV 192
Query: 576 KDAKVVIDRATGRTKGYGFVRLS 644
K AKVV DR TGR+KGYGFV+ +
Sbjct: 193 KSAKVVFDRTTGRSKGYGFVKFA 215
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 235 bits (597), Expect = 2e-059
Identities = 118/202 (58%), Positives = 146/202 (72%), Gaps = 8/202 (3%)
Frame = +3
Query: 60 PPGGLLPHHVPPPSAQQHYGYQQPPPYAAPPPQ----MWNPQAPPPSQPMTADEIRTLWI 227
P G+ P ++ QQ++ PY PPQ +W A PP QP +ADE+RTLWI
Sbjct: 2 PGHGIAPPNIGQQPPQQYHQAPPQQPYVMMPPQAPQALWAQSAQPPQQPASADEVRTLWI 61
Query: 228 GDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNST 407
GDLQ+WMDE++LY+CF +TGEV SVKVIRNKQTSQ E YGFIEF + A+AER LQTY
Sbjct: 62 GDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVLQTYQGA 121
Query: 408 PVPGLPDQLFRLNWASLGSGD---KRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVK 578
+P Q +RLNWA+ +G+ ++DD PD+TIFVGDLAADVTDY+L ETF+A + SVK
Sbjct: 122 IMPN-GGQSYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVK 180
Query: 579 DAKVVIDRATGRTKGYGFVRLS 644
AKVVIDR TGR+KGYGFVR +
Sbjct: 181 GAKVVIDRLTGRSKGYGFVRFA 202
>gi|293337265|ref|NP_001168324.1| hypothetical protein LOC100382091 [Zea mays]
Length = 406
Score = 233 bits (593), Expect = 5e-059
Identities = 119/203 (58%), Positives = 145/203 (71%), Gaps = 7/203 (3%)
Frame = +3
Query: 45 MQHPPPPGGLLPHHVPPPSAQQHYGYQQPPP--YAAPPPQMWNPQAPPPSQPMTADEIRT 218
M PPPP H PPP Q Y PPP + PPPQ AP P+ DE RT
Sbjct: 15 MAPPPPPQYYQAGH-PPPPPPQFYQAGPPPPAMWGQPPPQA--AAAPAPAGGGAGDEART 71
Query: 219 LWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTY 398
LWIGDLQ+WMDE++LYSCF+ GEV+SVK+IRNKQT Q E YGFIEF +HA AE+ LQ Y
Sbjct: 72 LWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQNY 131
Query: 399 NSTPVPGLPDQLFRLNWASLGSGDKR-DDSPDYTIFVGDLAADVTDYVLLETFKASHPSV 575
N +P + +Q F+LNWA+ G+G+KR DD DYTIFVGDLA+DVTD++L +TFK+ +PSV
Sbjct: 132 NGQMMPNV-NQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSV 190
Query: 576 KDAKVVIDRATGRTKGYGFVRLS 644
K AKVV DR TGR+KGYGFV+ +
Sbjct: 191 KGAKVVFDRTTGRSKGYGFVKFA 213
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 436
Score = 230 bits (585), Expect = 4e-058
Identities = 114/192 (59%), Positives = 143/192 (74%), Gaps = 12/192 (6%)
Frame = +3
Query: 78 PHHVPPPSAQQHYGYQQPPPYAA-----PPPQMWNPQAPPPSQPMTADEIRTLWIGDLQF 242
P PPP A + QPPP AA P PQ + P+ P +DE+RTLWIGDLQ+
Sbjct: 45 PQQQPPPQAM----WGQPPPQAAPYGQVPAPQQYYAAPQAPAAPAASDEVRTLWIGDLQY 100
Query: 243 WMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGL 422
WMDE+++YSCFA+TGE SVK+IR+KQT Q++ YGF+EF SHAAAER LQT+N +P +
Sbjct: 101 WMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQTFNGQMMPNV 160
Query: 423 PDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDR 602
+ +RLNWAS +G+KRDD+PDYTIFVGDLAADVTDY+L ETF+ +PSVK AKVV D+
Sbjct: 161 -ELAYRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDK 217
Query: 603 ATGRTKGYGFVR 638
T R+KGYGFV+
Sbjct: 218 MTMRSKGYGFVK 229
>gi|212722596|ref|NP_001131852.1| hypothetical protein LOC100193230 [Zea mays]
Length = 434
Score = 229 bits (583), Expect = 7e-058
Identities = 114/200 (57%), Positives = 145/200 (72%), Gaps = 10/200 (5%)
Frame = +3
Query: 39 ITMQHPPPPGGLLPHHVPPPSAQQHYGYQQPPPYAAPPPQMWNPQAPPPSQPMTADEIRT 218
+T Q+ PP P P +Q HYG APPPQ + P P+ P ADE+RT
Sbjct: 35 MTQQYGAPPPQQPPAMWGQPPSQAHYG-------QAPPPQPYYAAPPVPAAPAAADEVRT 87
Query: 219 LWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTY 398
LWIGDLQ+WMD+++++ CF++TGEV +VK+IR+K + Q++ YGF+EF S AAAER LQTY
Sbjct: 88 LWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQTY 147
Query: 399 NSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVK 578
N +P + D FRLNWAS +G+KRDD+PDYTIFVGDLAADVTDY+L ETF+ +PSVK
Sbjct: 148 NGQMMPNV-DLTFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVK 204
Query: 579 DAKVVIDRATGRTKGYGFVR 638
AKVV D+ T RTKGYGFV+
Sbjct: 205 GAKVVTDKLTMRTKGYGFVK 224
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza
sativa Japonica Group]
Length = 402
Score = 224 bits (569), Expect = 3e-056
Identities = 115/200 (57%), Positives = 140/200 (70%), Gaps = 10/200 (5%)
Frame = +3
Query: 54 PPPPGGLLPHHVPPPSAQQHYGYQQPPP-YAAPPPQMWNPQAPPPSQP---MTADEIRTL 221
PPPP PPP Q G P + PPP PQA PP P DE+RTL
Sbjct: 14 PPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPP----PQAAPPPAPAGGAAGDEVRTL 69
Query: 222 WIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYN 401
WIGDLQFWM+E++LY+CF+ GE++S K+IRNKQT Q E YGFIEF SHA AE+ LQ YN
Sbjct: 70 WIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGYN 129
Query: 402 STPVPGLPDQLFRLNWASLGSGDKR-DDSPDYTIFVGDLAADVTDYVLLETFKASHPSVK 578
+P +Q+F+LNWA+ G+G+KR DD DYTIFVGDLA+DVTD +L +TFKA + SVK
Sbjct: 130 GQMMPN-GNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVK 188
Query: 579 DAKVVIDRATGRTKGYGFVR 638
AKVV DR+TGR+KGYGFV+
Sbjct: 189 GAKVVFDRSTGRSKGYGFVK 208
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed
[Oryza sativa Japonica Group]
Length = 406
Score = 224 bits (569), Expect = 3e-056
Identities = 115/200 (57%), Positives = 140/200 (70%), Gaps = 10/200 (5%)
Frame = +3
Query: 54 PPPPGGLLPHHVPPPSAQQHYGYQQPPP-YAAPPPQMWNPQAPPPSQP---MTADEIRTL 221
PPPP PPP Q G P + PPP PQA PP P DE+RTL
Sbjct: 14 PPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPP----PQAAPPPAPAGGAAGDEVRTL 69
Query: 222 WIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYN 401
WIGDLQFWM+E++LY+CF+ GE++S K+IRNKQT Q E YGFIEF SHA AE+ LQ YN
Sbjct: 70 WIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGYN 129
Query: 402 STPVPGLPDQLFRLNWASLGSGDKR-DDSPDYTIFVGDLAADVTDYVLLETFKASHPSVK 578
+P +Q+F+LNWA+ G+G+KR DD DYTIFVGDLA+DVTD +L +TFKA + SVK
Sbjct: 130 GQMMPN-GNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVK 188
Query: 579 DAKVVIDRATGRTKGYGFVR 638
AKVV DR+TGR+KGYGFV+
Sbjct: 189 GAKVVFDRSTGRSKGYGFVK 208
>gi|225435468|ref|XP_002285479.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 447
Score = 223 bits (566), Expect = 6e-056
Identities = 111/183 (60%), Positives = 139/183 (75%), Gaps = 3/183 (1%)
Frame = +3
Query: 102 AQQHYGYQ-QPPPYAAPPPQMWNPQAPPPSQPMTADEIRTLWIGDLQFWMDESFLYSCFA 278
AQ H Q P +A+ A P +QP + +E+RTLWIGDLQ+W+DE++L+SCFA
Sbjct: 3 AQAHQQQQWMHPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFA 62
Query: 279 HTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASL 458
HTGEV+S+K+IRNK T Q E YGF+EFVSHAAAER LQ YN T +PG +Q FRLNWAS
Sbjct: 63 HTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPG-TEQTFRLNWASF 121
Query: 459 GSGDKRDDS-PDYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
G G++R D+ P+++IFVGDLA DVTDY+L ETF+A +PSV+ AKVV D TGRTKGYGFV
Sbjct: 122 GIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFV 181
Query: 636 RLS 644
+ S
Sbjct: 182 KFS 184
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 223 bits (566), Expect = 6e-056
Identities = 111/183 (60%), Positives = 139/183 (75%), Gaps = 3/183 (1%)
Frame = +3
Query: 102 AQQHYGYQ-QPPPYAAPPPQMWNPQAPPPSQPMTADEIRTLWIGDLQFWMDESFLYSCFA 278
AQ H Q P +A+ A P +QP + +E+RTLWIGDLQ+W+DE++L+SCFA
Sbjct: 3 AQAHQQQQWMHPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFA 62
Query: 279 HTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASL 458
HTGEV+S+K+IRNK T Q E YGF+EFVSHAAAER LQ YN T +PG +Q FRLNWAS
Sbjct: 63 HTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPG-TEQTFRLNWASF 121
Query: 459 GSGDKRDDS-PDYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
G G++R D+ P+++IFVGDLA DVTDY+L ETF+A +PSV+ AKVV D TGRTKGYGFV
Sbjct: 122 GIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFV 181
Query: 636 RLS 644
+ S
Sbjct: 182 KFS 184
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 215 bits (547), Expect = 1e-053
Identities = 103/153 (67%), Positives = 126/153 (82%), Gaps = 2/153 (1%)
Frame = +3
Query: 189 QPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSH 368
QP T +E+RTLWIGDLQ+W DES+L SCFAHTGEV+S+K+IRNK T Q E YGF+EFVSH
Sbjct: 12 QPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSH 71
Query: 369 AAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDS-PDYTIFVGDLAADVTDYVLL 545
AAAER LQTYN T +PG +Q FRLNWAS G G++R D+ P+++IFVGDLA DVTDY+L
Sbjct: 72 AAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQ 130
Query: 546 ETFKASHPSVKDAKVVIDRATGRTKGYGFVRLS 644
ETF+ +PSV+ AKVV D TGR+KGYGFV+ +
Sbjct: 131 ETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFA 163
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 412
Score = 215 bits (546), Expect = 1e-053
Identities = 102/151 (67%), Positives = 127/151 (84%), Gaps = 2/151 (1%)
Frame = +3
Query: 189 QPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSH 368
QP T +E+RTLWIGDLQ+W+DE++L SCFAHTGEVLS+K+IRNK T Q E YGF+EFVSH
Sbjct: 14 QPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSH 73
Query: 369 AAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDS-PDYTIFVGDLAADVTDYVLL 545
AAER LQTYN T +PG +Q FRLNWAS G G++R D+ P+++IFVGDL+ DVTDY+L
Sbjct: 74 VAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDVTDYLLQ 132
Query: 546 ETFKASHPSVKDAKVVIDRATGRTKGYGFVR 638
ETF+A++PSV+ AKVV D TGR+KGYGFV+
Sbjct: 133 ETFRANYPSVRGAKVVTDPNTGRSKGYGFVK 163
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed
[Oryza sativa Japonica Group]
Length = 416
Score = 213 bits (540), Expect = 6e-053
Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 2/158 (1%)
Frame = +3
Query: 174 APPPSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFI 353
A P QP + +E+RTLWIGDLQ+W DE++LY+CFAHTGE+ SVK+IRNK TS E YGFI
Sbjct: 3 AAPYHQPTSLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFI 62
Query: 354 EFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDS-PDYTIFVGDLAADVT 530
EF+SH AE+ LQTYN T +PG + FRLNWAS SG++R D+ PD++IFVGDLA DVT
Sbjct: 63 EFISHEVAEKVLQTYNGTQMPG-TEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVT 121
Query: 531 DYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFVRLS 644
DY+L ETF+ S+PSVK AKVV D TGR+KGYGFV+ +
Sbjct: 122 DYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFA 159
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,989,759,324,882
Number of Sequences: 15229318
Number of Extensions: 3989759324882
Number of Successful Extensions: 956570136
Number of sequences better than 0.0: 0
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