BLASTX 7.6.2
Query= UN35489 /QuerySize=1055
(1054 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 124 2e-027
sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 124 2e-027
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 124 2e-027
sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 123 3e-027
sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 122 5e-027
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 119 3e-026
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 105 8e-022
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 69 4e-011
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 67 1e-010
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 67 1e-010
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ... 67 1e-010
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 67 2e-010
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 64 2e-009
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ... 63 3e-009
sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dicty... 62 5e-009
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 62 6e-009
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 62 8e-009
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 61 1e-008
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 61 1e-008
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 61 1e-008
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1 OS=Bos taurus
GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 124 bits (309), Expect = 2e-027
Identities = 68/145 (46%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGE-VLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQ 392
+LW+GDL+ +MDE+F+ FA GE V+SVK+IRN+ T Y F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 393 TYNSTPVPG-LPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
N P+PG P + F+LN+A+ G + D+SP+Y++FVGDL DV D +L E F +P
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYGK--QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S + KVV+D+ TG +KGYGFV+ +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFT 145
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1 OS=Homo
sapiens GN=TRNAU1AP PE=1 SV=1
Length = 287
Score = 124 bits (309), Expect = 2e-027
Identities = 68/145 (46%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGE-VLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQ 392
+LW+GDL+ +MDE+F+ FA GE V+SVK+IRN+ T Y F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 393 TYNSTPVPG-LPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
N P+PG P + F+LN+A+ G + D+SP+Y++FVGDL DV D +L E F +P
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYGK--QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S + KVV+D+ TG +KGYGFV+ +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFT 145
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus
norvegicus GN=Trnau1ap PE=1 SV=1
Length = 287
Score = 124 bits (309), Expect = 2e-027
Identities = 68/145 (46%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGE-VLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQ 392
+LW+GDL+ +MDE+F+ FA GE V+SVK+IRN+ T Y F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 393 TYNSTPVPG-LPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
N P+PG P + F+LN+A+ G + D+SP+Y++FVGDL DV D +L E F +P
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYGK--QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S + KVV+D+ TG +KGYGFV+ +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFT 145
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1 OS=Mus
musculus GN=Trnau1ap PE=1 SV=2
Length = 287
Score = 123 bits (307), Expect = 3e-027
Identities = 68/145 (46%), Positives = 96/145 (66%), Gaps = 5/145 (3%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGE-VLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQ 392
+LW+GDL+ +MDE+F+ FA GE V+SVK+IRN+ T Y F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 393 TYNSTPVPG-LPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
N P+PG P + F+LN+A+ G + D+SP+Y++FVGDL DV D +L E F +P
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYGK--QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S + KVV+D TG +KGYGFV+ +
Sbjct: 122 SCRGGKVVLD-PTGVSKGYGFVKFT 145
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1 OS=Pongo
abelii GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 122 bits (305), Expect = 5e-027
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 5/145 (3%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGE-VLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQ 392
+LW+GDL+ +MDE+F+ FA GE V+SVK+IRN+ T Y F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 393 TYNSTPVPG-LPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
N P+PG P + F+LN+ + G + D+SP+Y++FVGDL DV D +L E F +P
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYGK--QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S + KVV+D+ TG +KGYGFV+ +
Sbjct: 122 SCRGGKVVLDQ-TGVSKGYGFVKFT 145
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 119 bits (298), Expect = 3e-026
Identities = 65/149 (43%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQ--VECYGFIEFVSHAAAERAL 389
TLW+GDL+ WMD +F+ +A E ++VKV+R+K +S + Y F++F S AAAERAL
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDD----SPDYTIFVGDLAADVTDYVLLETFK 557
YN+T +PG F+LNWA+ G G + ++ P+++IFVGDL D L TF+
Sbjct: 146 MKYNNTMIPG-AHCTFKLNWAT-GGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFR 203
Query: 558 ASHPSVKDAKVVIDRATGRTKGYGFVRLS 644
+ +PS AK+++D TG ++ YGFVR S
Sbjct: 204 SIYPSCTSAKIIVDPVTGLSRKYGFVRFS 232
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 105 bits (260), Expect = 8e-022
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQT 395
TLW+G+L+ W+ E+F+ + G+ + VK+IRN+ T Y F+EF S A A+ +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 396 YNSTPVPGLPDQLFRLNWASLGSGDKRDDS--PDYTIFVGDLAADVTDYVLLETFKASHP 569
N+ P+PG + LF+LNWAS G ++ S +Y+IFVGDL+ +V ++ + F + +
Sbjct: 153 MNNKPIPG-TNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYN 211
Query: 570 SVKDAKVVIDRATGRTKGYGFVRLS 644
S K AK++ D T ++GYGFVR +
Sbjct: 212 SCKSAKIMTDPQTNVSRGYGFVRFT 236
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 69 bits (168), Expect = 4e-011
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Frame = +3
Query: 141 AAPPPQMW---NPQAPPPSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVI 311
AAP P++ + AP SQP +A +L++G+L + E+ LY F+ G+V S++V
Sbjct: 26 AAPAPEVTAVESTTAPNASQPHSA----SLYVGELDPSVTEAMLYELFSSIGQVASIRVC 81
Query: 312 RNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPD 491
R+ T + Y ++ + + A ERAL+ N T + G P R+ W+ ++ +
Sbjct: 82 RDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKP---CRIMWSQRDPALRKTGQGN 138
Query: 492 YTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
+F+ +L + + + L +TF A+ ++ KV D G +KGYGFV
Sbjct: 139 --VFIKNLDSAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFV 182
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 67 bits (163), Expect = 1e-010
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Frame = +3
Query: 342 YGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRD------DSPDYTIF 503
Y F++F S A AL N +P P++ +LNWA+ + + + +IF
Sbjct: 108 YCFVDFPSSTHAANAL-LKNGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIF 166
Query: 504 VGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFVRLS 644
VGDLA +VT+ L E F + S AK+V D+ TG +KGYGFV+ +
Sbjct: 167 VGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFT 213
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3
SV=1
Length = 731
Score = 67 bits (163), Expect = 1e-010
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Frame = +3
Query: 96 PSAQQHYGYQQPPPY-AAPPPQMWNPQ---------APPPSQPMTADEIRTLWIGDLQFW 245
P+A+ G + P AA P P+ AP +QP +A +L++G+L
Sbjct: 9 PAAENVNGAAEASPAPAAAAPSATTPEVTAVENSTPAPAANQPHSA----SLYVGELDPS 64
Query: 246 MDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLP 425
+ E+ LY F+ G+V S++V R+ T + Y ++ + + A ERAL+ N T + G P
Sbjct: 65 VTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKP 124
Query: 426 DQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRA 605
R+ W+ ++ + +F+ +L + + + L +TF A+ ++ KV D
Sbjct: 125 ---CRIMWSQRDPALRKTGQGN--VFIKNLDSAIDNKALHDTF-AAFGNILSCKVAQDE- 177
Query: 606 TGRTKGYGFV 635
G +KGYGFV
Sbjct: 178 FGNSKGYGFV 187
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 67 bits (163), Expect = 1e-010
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Frame = +3
Query: 135 PYAAPPPQMWNPQAPPPSQPMTADE--IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKV 308
P A P++ ++ PS +A++ +L++G+L + E+ LY F+ G+V S++V
Sbjct: 24 PAATSAPEVTAVESASPSATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRV 83
Query: 309 IRNKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSP 488
R+ T + Y ++ + + A ERAL+ N T + G P R+ W+ ++
Sbjct: 84 CRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKP---CRIMWSQRDPALRKTGQG 140
Query: 489 DYTIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
+ +F+ +L A + + L +TF A+ ++ KV D G +KGYGFV
Sbjct: 141 N--VFIKNLDAAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFV 185
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 67 bits (161), Expect = 2e-010
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Frame = +3
Query: 177 PPPSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIE 356
P SQP +A +L++G+L + E+ LY F+ G+V S++V R+ T + Y ++
Sbjct: 44 PSASQPHSA----SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 99
Query: 357 FVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDY 536
+ + A ERAL+ N T + G P R+ W+ ++ + +F+ +L A + +
Sbjct: 100 YNNTADGERALEDLNYTLIKGKP---CRIMWSQRDPALRKTGQGN--VFIKNLDAAIDNK 154
Query: 537 VLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
L +TF A+ ++ KV D G +KGYGFV
Sbjct: 155 ALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFV 185
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 64 bits (154), Expect = 2e-009
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Frame = +3
Query: 141 AAPPPQMWNPQAPPPSQPMTADE--IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIR 314
A P++ ++ P+ P ++ +L++G+L + E+ LY F+ G+V S++V R
Sbjct: 25 ATSAPEVTAVESSSPTSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCR 84
Query: 315 NKQTSQVECYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDY 494
+ T + Y ++ + + A ERAL+ N T + G P R+ W+ ++ +
Sbjct: 85 DAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKP---CRIMWSQRDPALRKTGQGN- 140
Query: 495 TIFVGDLAADVTDYVLLETFKASHPSVKDAKVVIDRATGRTKGYGFV 635
+F+ +L + + + L +TF A+ ++ KV D G +KGYGFV
Sbjct: 141 -VFIKNLDSAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFV 184
>sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A OS=Xenopus
laevis GN=epabp-a PE=1 SV=2
Length = 629
Score = 63 bits (152), Expect = 3e-009
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Frame = +3
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
+ +L+IGDL + E+ LY F+ G ++S++V R+ T + Y +I F A AERAL
Sbjct: 10 LASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERAL 69
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
T N + G P R+ W+ G ++ S +F+ +L + + L +TF A
Sbjct: 70 DTMNFEVIKGRP---IRIMWSQRDPGLRK--SGVGNVFIKNLDESIDNKALYDTFSA-FG 123
Query: 570 SVKDAKVVIDRATGRTKGY 626
++ KVV D R G+
Sbjct: 124 NILSCKVVCDEHGSRGYGF 142
>sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium
discoideum GN=pabpc1A PE=1 SV=1
Length = 565
Score = 62 bits (150), Expect = 5e-009
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Frame = +3
Query: 216 TLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERALQT 395
+L++GDL + E L+ F G V +++V R+ T + Y ++ + + A AERAL T
Sbjct: 11 SLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDT 70
Query: 396 YNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHPSV 575
N+TP+ G + R+ W+ ++ S +F+ +L + L +TF A ++
Sbjct: 71 LNNTPIRG---KACRIMWSQRDPSLRK--SGVGNVFIKNLDKGIDHKALYDTFSA-FGNI 124
Query: 576 KDAKVVIDRATGRTKGYGFV 635
KVV D +KG+GFV
Sbjct: 125 LSCKVVTDDGNS-SKGFGFV 143
>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=Xenopus
tropicalis GN=epabp PE=2 SV=1
Length = 629
Score = 62 bits (149), Expect = 6e-009
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Frame = +3
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
+ +L++GDL + E+ LY F+ G ++S++V R+ T + Y +I F A AERAL
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERAL 69
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
T N + G P R+ W+ G ++ S +F+ +L + + L +TF A
Sbjct: 70 DTMNFEVIKGRP---IRIMWSQRDPGLRK--SGVGNVFIKNLDESIDNKALYDTFSA-FG 123
Query: 570 SVKDAKVVIDRATGRTKGY 626
++ KVV D R G+
Sbjct: 124 NILSCKVVCDEHGSRGYGF 142
>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B OS=Xenopus
laevis GN=epabp-b PE=2 SV=1
Length = 629
Score = 62 bits (148), Expect = 8e-009
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Frame = +3
Query: 210 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFVSHAAAERAL 389
+ +L+IGDL + E+ LY F+ G ++S++V R+ T + Y +I F A AERAL
Sbjct: 10 LASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERAL 69
Query: 390 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASHP 569
T N + G P R+ W+ G ++ S +F+ +L + + L +TF A
Sbjct: 70 DTMNFEVIKGRP---IRIMWSQRDPGLRK--SGVGNVFIKNLDDSIDNKALYDTFSA-FG 123
Query: 570 SVKDAKVVIDRATGRTKGY 626
+ KVV D R G+
Sbjct: 124 DILSCKVVCDEYGSRGYGF 142
>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus laevis
GN=pabpc1-a PE=1 SV=3
Length = 633
Score = 61 bits (147), Expect = 1e-008
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 183 PSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFV 362
PS PM +L++GDL + E+ LY F+ G +LS++V R+ T + Y ++ F
Sbjct: 6 PSYPMA-----SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 363 SHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVL 542
A AERAL T N + G P R+ W+ ++ S IF+ +L + + L
Sbjct: 61 QPADAERALDTMNFDVIKGRP---VRIMWSQRDPSLRK--SGVGNIFIKNLDKSIDNKAL 115
Query: 543 LETFKASHPSVKDAKVVIDRATGRTKGY 626
+TF A ++ KVV D + G+
Sbjct: 116 YDTFSA-FGNILSCKVVCDENGSKGYGF 142
>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1
PE=2 SV=1
Length = 636
Score = 61 bits (146), Expect = 1e-008
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 183 PSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFV 362
PS PM +L++GDL + E+ LY F+ G +LS++V R+ T + Y ++ F
Sbjct: 6 PSYPMA-----SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 363 SHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVL 542
A AERAL T N + G P R+ W+ ++ S IF+ +L + + L
Sbjct: 61 QPADAERALDTMNFDVIKGKP---VRIMWSQRDPSLRK--SGVGNIFIKNLDKSIDNKAL 115
Query: 543 LETFKASHPSVKDAKVVIDRATGRTKGY 626
+TF A ++ KVV D + G+
Sbjct: 116 YDTFSA-FGNILSCKVVCDENGSKGYGF 142
>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1
PE=1 SV=2
Length = 636
Score = 61 bits (146), Expect = 1e-008
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 183 PSQPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVECYGFIEFV 362
PS PM +L++GDL + E+ LY F+ G +LS++V R+ T + Y ++ F
Sbjct: 6 PSYPMA-----SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 363 SHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVL 542
A AERAL T N + G P R+ W+ ++ S IF+ +L + + L
Sbjct: 61 QPADAERALDTMNFDVIKGKP---VRIMWSQRDPSLRK--SGVGNIFIKNLDKSIDNKAL 115
Query: 543 LETFKASHPSVKDAKVVIDRATGRTKGY 626
+TF A ++ KVV D + G+
Sbjct: 116 YDTFSA-FGNILSCKVVCDENGSKGYGF 142
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,598,207,520
Number of Sequences: 518415
Number of Extensions: 138598207520
Number of Successful Extensions: 868537296
Number of sequences better than 0.0: 0
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