BLASTX 7.6.2
Query= UN35663 /QuerySize=539
(538 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22331374|ref|NP_189407.2| zinc finger CCCH domain-containing ... 90 2e-016
gi|17064996|gb|AAL32652.1| Unknown protein [Arabidopsis thaliana] 90 2e-016
gi|297818368|ref|XP_002877067.1| RNA recognition motif-containin... 90 2e-016
gi|225452372|ref|XP_002273438.1| PREDICTED: hypothetical protein... 64 1e-008
gi|296087622|emb|CBI34878.3| unnamed protein product [Vitis vini... 64 1e-008
gi|224059950|ref|XP_002300018.1| predicted protein [Populus tric... 61 8e-008
gi|224141287|ref|XP_002324006.1| predicted protein [Populus tric... 60 1e-007
gi|255567351|ref|XP_002524655.1| rrm/rnp domain, putative [Ricin... 58 5e-007
>gi|22331374|ref|NP_189407.2| zinc finger CCCH domain-containing protein 41
[Arabidopsis thaliana]
Length = 908
Score = 90 bits (221), Expect = 2e-016
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 6/68 (8%)
Frame = -1
Query: 202 MELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSD 23
+ +SSPK+ VLS DCMSDP EEEHEISE+EDDDRNHKHRRKEE ++SQSLEQ SSD
Sbjct: 3 LSVSSPKQSVLSPPDCMSDP--EEEHEISEEEDDDRNHKHRRKEE---TRSQSLEQDSSD 57
Query: 22 HQ-ARPYR 2
+RPYR
Sbjct: 58 QAFSRPYR 65
>gi|17064996|gb|AAL32652.1| Unknown protein [Arabidopsis thaliana]
Length = 908
Score = 90 bits (221), Expect = 2e-016
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 6/68 (8%)
Frame = -1
Query: 202 MELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSD 23
+ +SSPK+ VLS DCMSDP EEEHEISE+EDDDRNHKHRRKEE ++SQSLEQ SSD
Sbjct: 3 LSVSSPKQSVLSPPDCMSDP--EEEHEISEEEDDDRNHKHRRKEE---TRSQSLEQDSSD 57
Query: 22 HQ-ARPYR 2
+RPYR
Sbjct: 58 QAFSRPYR 65
>gi|297818368|ref|XP_002877067.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 934
Score = 90 bits (221), Expect = 2e-016
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 6/68 (8%)
Frame = -1
Query: 202 MELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSD 23
+ +SSPK+ VLS DCMSDP EEEHEISE+EDDDRNHKHRRKEE ++SQSLEQ SSD
Sbjct: 3 LSVSSPKQSVLSPPDCMSDP--EEEHEISEEEDDDRNHKHRRKEE---TRSQSLEQDSSD 57
Query: 22 HQ-ARPYR 2
+RPYR
Sbjct: 58 QAFSRPYR 65
>gi|225452372|ref|XP_002273438.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 924
Score = 64 bits (153), Expect = 1e-008
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 8/67 (11%)
Frame = -1
Query: 199 ELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSDH 20
++SSPK LS SD SDPEE+ EIS+++DDDRNHKHRR+E ++SQSLE+ S +
Sbjct: 4 KVSSPKPSGLSPSDGESDPEEK---EISDEDDDDRNHKHRRRE----TRSQSLERDSLEQ 56
Query: 19 -QARPYR 2
+RPYR
Sbjct: 57 VLSRPYR 63
>gi|296087622|emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 64 bits (153), Expect = 1e-008
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 8/67 (11%)
Frame = -1
Query: 199 ELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSDH 20
++SSPK LS SD SDPEE+ EIS+++DDDRNHKHRR+E ++SQSLE+ S +
Sbjct: 4 KVSSPKPSGLSPSDGESDPEEK---EISDEDDDDRNHKHRRRE----TRSQSLERDSLEQ 56
Query: 19 -QARPYR 2
+RPYR
Sbjct: 57 VLSRPYR 63
>gi|224059950|ref|XP_002300018.1| predicted protein [Populus trichocarpa]
Length = 981
Score = 61 bits (146), Expect = 8e-008
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 8/67 (11%)
Frame = -1
Query: 199 ELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSDH 20
++S K LS ++C+SDPEE+ E+S++EDDDRNHKHRR+E ++SQSLE+ S +
Sbjct: 4 KVSPLKTGGLSPAECISDPEEK---EVSDEEDDDRNHKHRRRE----TRSQSLERDSLEP 56
Query: 19 -QARPYR 2
RPYR
Sbjct: 57 VSTRPYR 63
>gi|224141287|ref|XP_002324006.1| predicted protein [Populus trichocarpa]
Length = 964
Score = 60 bits (144), Expect = 1e-007
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 8/67 (11%)
Frame = -1
Query: 199 ELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQSQSLEQGSSDH 20
++S+ K LS +DC+SDPEE+ E+S+++DDDRNHKHRR+E +SQSLE+ S +
Sbjct: 4 KVSTLKTGGLSPADCISDPEEK---EVSDEDDDDRNHKHRRRE----IRSQSLERDSLEP 56
Query: 19 Q-ARPYR 2
RPYR
Sbjct: 57 VFTRPYR 63
>gi|255567351|ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
Length = 972
Score = 58 bits (139), Expect = 5e-007
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
Frame = -1
Query: 199 ELSSPKERVLSSSDCMSDPEEEEEHEISEDEDDDRNHKHRRKEEETRSQS 50
+++S K LS SDC SDPEE+ EIS+++DDDRNHKHRR+ ETRSQS
Sbjct: 4 KVASVKPGGLSPSDCASDPEEK---EISDEDDDDRNHKHRRR--ETRSQS 48
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,003,800,203,567
Number of Sequences: 15229318
Number of Extensions: 4003800203567
Number of Successful Extensions: 965338997
Number of sequences better than 0.0: 0
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