Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN35746


BLASTX 7.6.2

Query= UN35746 /QuerySize=1227
        (1226 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P34909|NOT4_YEAST General negative regulator of transcription...     73   4e-012
sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 O...     69   8e-011
sp|Q8BT14|CNOT4_MOUSE CCR4-NOT transcription complex subunit 4 O...     69   8e-011
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote...     55   9e-007

>sp|P34909|NOT4_YEAST General negative regulator of transcription subunit 4
        OS=Saccharomyces cerevisiae GN=NOT4 PE=1 SV=1

          Length = 587

 Score =  73 bits (177), Expect = 4e-012
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = -3

Query: 522 HHRFPVLDKRFTTASAPSSCPICCEDLDATDSSFFPCPCGFRLCLFCHKTIFDG---DGR 352
           H+     D  F +      CP+C E +D TD +FFPCPCG+++C FC+  I      +GR
Sbjct:  14 HNALSNFDTSFLSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGR 73

Query: 351 CPGCRKPYE 325
           CP CR+ Y+
Sbjct:  74 CPACRRKYD 82

>sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4 OS=Homo sapiens
        GN=CNOT4 PE=1 SV=3

          Length = 575

 Score =  69 bits (166), Expect = 8e-011
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -3

Query: 474 PSSCPICCEDLDATDSSFFPCPCGFRLCLFC-HKTIFDGDGRCPGCRKPYERNAIV 310
           P  CP+C E L+  D +FFPC CG+++C FC H+   D +G CP CRKPY  +  V
Sbjct:  11 PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66

>sp|Q8BT14|CNOT4_MOUSE CCR4-NOT transcription complex subunit 4 OS=Mus musculus
        GN=Cnot4 PE=1 SV=2

          Length = 575

 Score =  69 bits (166), Expect = 8e-011
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -3

Query: 474 PSSCPICCEDLDATDSSFFPCPCGFRLCLFC-HKTIFDGDGRCPGCRKPYERNAIV 310
           P  CP+C E L+  D +FFPC CG+++C FC H+   D +G CP CRKPY  +  V
Sbjct:  11 PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66

>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
        OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1

          Length = 414

 Score =  55 bits (131), Expect = 9e-007
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
 Frame = -3

Query: 855 ESYMESPSSSSVGGTNFSERSRTSSSSSSSSSSSSSNNADDDDGCVDDWEALAD----AL 688
           ES   S SSS     + SE   +SSSSSS S SSSS+++D +       E   D    + 
Sbjct:  34 ESSSSSSSSSESESESESESESSSSSSSSDSESSSSSSSDSESEAETKKEESKDSSSSSS 93

Query: 687 EAEEEEEEEEEKETLLHESAKEQESLLHVVGVGDEEASSRKQMSNRAWRKPDD 529
           ++  +EEEEEEKE    E +KE  S          ++ S K+ SN   RK +D
Sbjct:  94 DSSSDEEEEEEKEETKKEESKESSS-SDSSSSSSSDSESEKEESNDKKRKSED 145

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,620,162,213
Number of Sequences: 518415
Number of Extensions: 139620162213
Number of Successful Extensions: 879987080
Number of sequences better than 0.0: 0