BLASTX 7.6.2
Query= UN35892 /QuerySize=1107
(1106 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59950.1 | Symbols: | RNA and export factor-b... 355 4e-098
TAIR9_protein||AT5G59950.3 | Symbols: | RNA and export factor-b... 351 8e-097
TAIR9_protein||AT5G59950.2 | Symbols: | RNA and export factor-b... 290 1e-078
TAIR9_protein||AT5G59950.4 | Symbols: | RNA and export factor-b... 260 1e-069
TAIR9_protein||AT5G02530.1 | Symbols: | RNA and export factor-b... 153 2e-037
TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-b... 149 5e-036
TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-b... 146 3e-035
TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-b... 138 1e-032
TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE... 56 4e-008
TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A... 54 2e-007
TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein | ... 50 2e-006
TAIR9_protein||AT4G36230.1 | Symbols: | unknown protein | chr4:... 49 5e-006
>TAIR9_protein||AT5G59950.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141504 FORWARD
Length = 245
Score = 355 bits (909), Expect = 4e-098
Identities = 183/219 (83%), Positives = 189/219 (86%), Gaps = 3/219 (1%)
Frame = +1
Query: 190 GSGSGSGPIRRNNPNRKSNRSAPYQSAAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGT 369
GSGSG GP RRNNPNRKS RSAPYQS AKAPESTW HDM+S RS RSSAGIETGT
Sbjct: 30 GSGSGPGPTRRNNPNRKSTRSAPYQS-AKAPESTWGHDMFSDRSEDHRSGRSSAGIETGT 88
Query: 370 KLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKY 549
KLYISNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKY
Sbjct: 89 KLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKY 148
Query: 550 NDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSRRGGQGRGGQQRRGGGGGQG 729
NDVQLDGKPMKIEIVG NLQ A+APSGR N N GA RGGQGRGGQQR GG GG G
Sbjct: 149 NDVQLDGKPMKIEIVGTNLQTAAAPSGR-PANGNSNGA-PWRGGQGRGGQQRGGGRGGGG 206
Query: 730 GRGGGRGRRSGKGPAEKVSAEDLDADLDKYHAGDMETN* 846
GGGRGRR GKGPAEK+SAEDLDADLDKYH+GDMETN*
Sbjct: 207 RGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMETN* 245
>TAIR9_protein||AT5G59950.3 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141504 FORWARD
Length = 243
Score = 351 bits (898), Expect = 8e-097
Identities = 181/219 (82%), Positives = 187/219 (85%), Gaps = 5/219 (2%)
Frame = +1
Query: 190 GSGSGSGPIRRNNPNRKSNRSAPYQSAAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGT 369
GSGSG GP RRNNPNRKS RSAPYQS APESTW HDM+S RS RSSAGIETGT
Sbjct: 30 GSGSGPGPTRRNNPNRKSTRSAPYQS---APESTWGHDMFSDRSEDHRSGRSSAGIETGT 86
Query: 370 KLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKY 549
KLYISNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKY
Sbjct: 87 KLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKY 146
Query: 550 NDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSRRGGQGRGGQQRRGGGGGQG 729
NDVQLDGKPMKIEIVG NLQ A+APSGR N N GA RGGQGRGGQQR GG GG G
Sbjct: 147 NDVQLDGKPMKIEIVGTNLQTAAAPSGR-PANGNSNGA-PWRGGQGRGGQQRGGGRGGGG 204
Query: 730 GRGGGRGRRSGKGPAEKVSAEDLDADLDKYHAGDMETN* 846
GGGRGRR GKGPAEK+SAEDLDADLDKYH+GDMETN*
Sbjct: 205 RGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMETN* 243
>TAIR9_protein||AT5G59950.2 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140629-24141504 FORWARD
Length = 179
Score = 290 bits (742), Expect = 1e-078
Identities = 150/181 (82%), Positives = 156/181 (86%), Gaps = 2/181 (1%)
Frame = +1
Query: 304 MYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGR 483
M+S RS RSSAGIETGTKLYISNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGR
Sbjct: 1 MFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGR 60
Query: 484 SKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGA 663
SKGTAEVVYSRRGDA+AAVKKYNDVQLDGKPMKIEIVG NLQ A+APSGR N N GA
Sbjct: 61 SKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGR-PANGNSNGA 119
Query: 664 SSRRGGQGRGGQQRRGGGGGQGGRGGGRGRRSGKGPAEKVSAEDLDADLDKYHAGDMETN 843
RGGQGRGGQQR GG GG G GGGRGRR GKGPAEK+SAEDLDADLDKYH+GDMETN
Sbjct: 120 -PWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMETN 178
Query: 844 * 846
*
Sbjct: 179 * 179
>TAIR9_protein||AT5G59950.4 | Symbols: | RNA and export factor-binding protein,
putative | chr5:24140235-24141410 FORWARD
Length = 212
Score = 260 bits (663), Expect = 1e-069
Identities = 135/161 (83%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +1
Query: 190 GSGSGSGPIRRNNPNRKSNRSAPYQSAAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGT 369
GSGSG GP RRNNPNRKS RSAPYQS AKAPESTW HDM+S RS RSSAGIETGT
Sbjct: 30 GSGSGPGPTRRNNPNRKSTRSAPYQS-AKAPESTWGHDMFSDRSEDHRSGRSSAGIETGT 88
Query: 370 KLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKY 549
KLYISNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKY
Sbjct: 89 KLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKY 148
Query: 550 NDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSR 672
NDVQLDGKPMKIEIVG NLQ A+APSGR N N GA R
Sbjct: 149 NDVQLDGKPMKIEIVGTNLQTAAAPSGR-PANGNSNGAPWR 188
>TAIR9_protein||AT5G02530.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:564332-565776 REVERSE
Length = 293
Score = 153 bits (386), Expect = 2e-037
Identities = 86/145 (59%), Positives = 98/145 (67%), Gaps = 8/145 (5%)
Frame = +1
Query: 349 AGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA 528
+ IETGTKLYISNLDYGV N+DIKELF+EVG+LKRY +H+DRSGRSKGTAEVV+SRRGDA
Sbjct: 102 SSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDA 161
Query: 529 IAAVKKYNDVQLDGKPMKIEIVGNNLQAASAP-----SGRHGGNANFGGASSRRGGQGRG 693
+AAVK+YN+VQLDGK MKIEIVG NL A + P N G + G G
Sbjct: 162 LAAVKRYNNVQLDGKLMKIEIVGTNLSAPALPILATAQIPFPTNGILGNFNENFNGNFNG 221
Query: 694 GQQRRGGGGGQGGRGGGRGRRSGKG 768
G GRGG GR G G
Sbjct: 222 ---NFNGNFRGRGRGGFMGRPRGGG 243
Score = 64 bits (155), Expect = 1e-010
Identities = 40/75 (53%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Frame = +1
Query: 643 NANFGGASSRRGGQGRGGQQRRGGGGG---QGGRG----GGRGRRSGKGPAEKVSAEDLD 801
N NF G RG G G+ R GG GG +GGRG GGRG G+G E VSAEDLD
Sbjct: 220 NGNFNGNFRGRGRGGFMGRPRGGGFGGGNFRGGRGARGRGGRG-SGGRGRDENVSAEDLD 278
Query: 802 ADLDKYHAGDMETN* 846
A+LDKYH MET+*
Sbjct: 279 AELDKYHKEAMETS* 293
>TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 289
Score = 149 bits (374), Expect = 5e-036
Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 15/207 (7%)
Frame = +1
Query: 172 RIRSPRGSGSGSGPIRRN--NPNRKSNRSAPYQSAAKAPESTWEHDMYSSEGFPSRSTRS 345
R R G G G+GP RR N + + + + W+ ++
Sbjct: 30 RGRGRGGGGRGAGPARRGPLAVNARPSSFTINKPVRRVRSLPWQSGLFED----GLRAAG 85
Query: 346 SAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGD 525
++G+E GT+L+++NLD GV N+DI+ELF+E+GE++RY +H+D++GR GTAEVVY RR D
Sbjct: 86 ASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSD 145
Query: 526 AIAAVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSRRGGQGRGGQQR 705
A A+KKYN+V LDG+PM++EI+G N + + SGR N N G + R R +
Sbjct: 146 AFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGR--VNVNVTGLNGR---LKRTVVIQ 200
Query: 706 RGGGGGQGGRGGGRGRRSGKGPAEKVS 786
+GG GGRG RG R G+GPA VS
Sbjct: 201 QGG----GGRGRVRGGRGGRGPAPTVS 223
>TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-binding protein,
putative | chr1:24695895-24697883 REVERSE
Length = 296
Score = 146 bits (367), Expect = 3e-035
Identities = 85/190 (44%), Positives = 114/190 (60%), Gaps = 14/190 (7%)
Frame = +1
Query: 190 GSGSGSGPIRRN--NPNRKSNRSAPYQSAAKAPES-TW--EHDMYSSEGFPSRSTRSSAG 354
G G G GP+RR N + + S A+ S W ++D+Y + +G
Sbjct: 47 GGGRGGGPVRRGPLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEE----TLRAVGVSG 102
Query: 355 IETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIA 534
+E GT +YI+NLD GV N+DI+EL+AE+GELKRY +H+D++GR G+AEVVY RR DAI
Sbjct: 103 VEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQ 162
Query: 535 AVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSRRG--GQG-RGGQQR 705
A++KYN+V LDG+PMK+EI+G N + SAP G R GQG RGG+
Sbjct: 163 AMRKYNNVLLDGRPMKLEILGGNTE--SAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVG 220
Query: 706 RGGGGGQGGR 735
RG G G GR
Sbjct: 221 RGRGSGPSGR 230
>TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 281
Score = 138 bits (345), Expect = 1e-032
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Frame = +1
Query: 172 RIRSPRGSGSGSGPIRRN--NPNRKSNRSAPYQSAAKAPESTWEHDMYSSEGFPSRSTRS 345
R R G G G+GP RR N + + + + W+ ++
Sbjct: 30 RGRGRGGGGRGAGPARRGPLAVNARPSSFTINKPVRRVRSLPWQSGLFED----GLRAAG 85
Query: 346 SAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGD 525
++G+E GT+L+++NLD GV N+DI+ELF+E+GE++RY +H+D++GR GTAEVVY RR D
Sbjct: 86 ASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSD 145
Query: 526 AIAAVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGGNANFGGASSRRGGQGRGGQQR 705
A A+KKYN+V LDG+PM++EI+G N + + SGR N N G + R + Q
Sbjct: 146 AFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGR--VNVNVTGLNGRL--KRTVVIQV 201
Query: 706 RGGGGGQG 729
RGG GG+G
Sbjct: 202 RGGRGGRG 209
>TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN
2B); DNA binding / nucleic acid binding / zinc ion binding |
chr2:9036983-9037588 REVERSE
Length = 202
Score = 56 bits (133), Expect = 4e-008
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +1
Query: 553 DVQLD--GKPMKIEIVGNN---LQAASAPSGRHGGNANFGGASSRRGGQGRGGQQRRGGG 717
DV++D G+P IE+ G + +Q S G GG FGG R GG+G G GG
Sbjct: 64 DVEVDNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGG 123
Query: 718 GGQGGRGGGRGRRS 759
G GGRGGG G S
Sbjct: 124 RGSGGRGGGGGDNS 137
>TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A) BINDING
PROTEIN 4); RNA binding / translation initiation factor |
chr2:9943209-9946041 FORWARD
Length = 663
Score = 54 bits (127), Expect = 2e-007
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = +1
Query: 364 GTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVK 543
G LY+ NLD V ++ ++ELFAE G + V D SG SKG+ V +S +A +
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 544 KYNDVQLDGKPMKIEI 591
+ N + GKP+ + +
Sbjct: 387 EMNGKMVGGKPLYVAL 402
>TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein |
chr4:14889246-14889734 REVERSE
Length = 163
Score = 50 bits (119), Expect = 2e-006
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +1
Query: 613 ASAPSGRHGGNANFGGASSRRGGQGRGGQQRRGGGGGQGGRGGGRGRRSGKGPAE 777
A + +G H G+ + G + S RG GG GGGGG GGRGGG G +G+G E
Sbjct: 95 AGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHGGGGGGGGGRGGGGGSGNGEGYGE 149
>TAIR9_protein||AT4G36230.1 | Symbols: | unknown protein |
chr4:17145586-17146251 FORWARD
Length = 222
Score = 49 bits (115), Expect = 5e-006
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +1
Query: 598 NNLQAASAPSGRHGGNANFGGASSRRGGQGRGGQQRRGGGGGQGGRGGGRGRRSGKG 768
N+ + + G GG GG S G+GRGG GGGGG GG GGG G G G
Sbjct: 122 NSHKRNKSSGGGGGGGGGGGGGSGNGSGRGRGGGGGGGGGGGGGGGGGGGGGGGGGG 178
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,361,717,054
Number of Sequences: 33410
Number of Extensions: 18361717054
Number of Successful Extensions: 583703633
Number of sequences better than 0.0: 0
|
