BLASTX 7.6.2
Query= UN35978 /QuerySize=854
(853 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15225494|ref|NP_181487.1| geranylgeranyl transferase type-1 s... 121 2e-025
gi|11878247|gb|AAG40865.1|AF311225_1 geranylgeranyltransferase b... 121 2e-025
gi|224100967|ref|XP_002312088.1| predicted protein [Populus tric... 81 2e-013
gi|255583055|ref|XP_002532295.1| geranylgeranyl transferase type... 80 3e-013
gi|297823845|ref|XP_002879805.1| geranylgeranyltransferase-I bet... 74 3e-011
gi|225449493|ref|XP_002278609.1| PREDICTED: hypothetical protein... 73 4e-011
gi|37787343|gb|AAP50511.1| geranylgeranyltransferase type I beta... 72 1e-010
>gi|15225494|ref|NP_181487.1| geranylgeranyl transferase type-1 subunit beta
[Arabidopsis thaliana]
Length = 375
Score = 121 bits (301), Expect = 2e-025
Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 4/82 (4%)
Frame = +2
Query: 56 MSGTEATDDSE----EEEEEEEYTSPSQPPSSANFDKDRHLVYLQMMYELLPYHYQSQEI 223
MS T + DS+ EEE+EEEY+ P Q SANF+KDRHL+YL+MMYELLPYHYQSQEI
Sbjct: 1 MSETAVSIDSDRSKSEEEDEEEYSPPVQSSPSANFEKDRHLMYLEMMYELLPYHYQSQEI 60
Query: 224 NRLTLAHFIISGLHFLGATDRL 289
NRLTLAHFIISGLHFLGA DR+
Sbjct: 61 NRLTLAHFIISGLHFLGARDRV 82
>gi|11878247|gb|AAG40865.1|AF311225_1 geranylgeranyltransferase beta subunit
[Arabidopsis thaliana]
Length = 376
Score = 121 bits (301), Expect = 2e-025
Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 4/82 (4%)
Frame = +2
Query: 56 MSGTEATDDSE----EEEEEEEYTSPSQPPSSANFDKDRHLVYLQMMYELLPYHYQSQEI 223
MS T + DS+ EEE+EEEY+ P Q SANF+KDRHL+YL+MMYELLPYHYQSQEI
Sbjct: 1 MSETAVSIDSDRSKSEEEDEEEYSPPVQSSPSANFEKDRHLMYLEMMYELLPYHYQSQEI 60
Query: 224 NRLTLAHFIISGLHFLGATDRL 289
NRLTLAHFIISGLHFLGA DR+
Sbjct: 61 NRLTLAHFIISGLHFLGARDRV 82
>gi|224100967|ref|XP_002312088.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 81 bits (198), Expect = 2e-013
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 6/71 (8%)
Frame = +2
Query: 77 DDSEEEEEEEEYTSPSQPPSSANFDKDRHLVYLQMMYELLPYHYQSQEINRLTLAHFIIS 256
D S +EE S P SS FDK+RH+ +L+MMY +LP HYQSQEIN LTLA+F+IS
Sbjct: 15 DPSSSSDEE------SPPSSSLTFDKERHVAFLEMMYFMLPCHYQSQEINHLTLAYFVIS 68
Query: 257 GLHFLGATDRL 289
GL LG+ DR+
Sbjct: 69 GLDILGSLDRV 79
>gi|255583055|ref|XP_002532295.1| geranylgeranyl transferase type I beta
subunit, putative [Ricinus communis]
Length = 370
Score = 80 bits (196), Expect = 3e-013
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +2
Query: 62 GTEATDDSEEEEEEEEYTSPSQPPSSANFDKDRHLVYLQMMYELLPYHYQSQEINRLTLA 241
G E S + EE SP Q S++F+++ H+ YL+MMY++LP +YQSQEINRLTLA
Sbjct: 5 GMEWNLSSPSSSDGEEQPSPFQ---SSSFNREHHIAYLEMMYQMLPNYYQSQEINRLTLA 61
Query: 242 HFIISGLHFLGATDRL 289
+F ISGLH L A DR+
Sbjct: 62 YFTISGLHILNALDRV 77
>gi|297823845|ref|XP_002879805.1| geranylgeranyltransferase-I beta subunit
[Arabidopsis lyrata subsp. lyrata]
Length = 329
Score = 74 bits (180), Expect = 3e-011
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 182 MYELLPYHYQSQEINRLTLAHFIISGLHFLGATDRL 289
MYELLPYHYQSQEINRLTLAHFIISGLHFLGA DR+
Sbjct: 1 MYELLPYHYQSQEINRLTLAHFIISGLHFLGARDRV 36
>gi|225449493|ref|XP_002278609.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 351
Score = 73 bits (178), Expect = 4e-011
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +2
Query: 134 SSANFDKDRHLVYLQMMYELLPYHYQSQEINRLTLAHFIISGLHFLGATDRL 289
SS+ FD+++H+V+LQMM +LLP YQ QEINRLTLA+F ISGLH LGA D +
Sbjct: 7 SSSFFDREKHVVFLQMMNQLLPSDYQGQEINRLTLAYFAISGLHILGALDEV 58
>gi|37787343|gb|AAP50511.1| geranylgeranyltransferase type I beta subunit
[Catharanthus roseus]
Length = 359
Score = 72 bits (174), Expect = 1e-010
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +2
Query: 146 FDKDRHLVYLQMMYELLPYHYQSQEINRLTLAHFIISGLHFLGATDRL 289
FD+DRH+ +L+MMY+LLP YQSQEIN +TLAHF I GL LGA DR+
Sbjct: 17 FDRDRHVQFLEMMYDLLPSRYQSQEINHITLAHFAIVGLDILGALDRI 64
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,100,172,876,348
Number of Sequences: 15229318
Number of Extensions: 4100172876348
Number of Successful Extensions: 984362955
Number of sequences better than 0.0: 0
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