BLASTX 7.6.2
Query= UN36348 /QuerySize=662
(661 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G20260.1 | Symbols: | structural constituent ... 137 9e-033
TAIR9_protein||ATCG00050.1 | Symbols: RPS16 | Homologous to the ... 112 2e-025
TAIR9_protein||AT1G73850.1 | Symbols: | structural constituent ... 53 1e-007
TAIR9_protein||AT4G34620.1 | Symbols: SSR16 | SSR16 (SMALL SUBUN... 50 1e-006
>TAIR9_protein||AT3G20260.1 | Symbols: | structural constituent of ribosome |
chr3:7064190-7065751 REVERSE
Length = 438
Score = 137 bits (343), Expect = 9e-033
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 233 KGLRKKSWPQTWEGVQLLFAGIDIKLATRVFRMGKISKEQLLWCEEKMKKLNFSAGKLQR 412
KGLRKKSWPQTWEGVQLLFA IDIKLATRV RM KISKEQLLWCEEKMKKLNFSAGKLQR
Sbjct: 369 KGLRKKSWPQTWEGVQLLFAAIDIKLATRVLRMSKISKEQLLWCEEKMKKLNFSAGKLQR 428
Query: 413 HPSPVLFP 436
HPSP+LFP
Sbjct: 429 HPSPILFP 436
>TAIR9_protein||ATCG00050.1 | Symbols: RPS16 | Homologous to the bacterial
ribosomal protein S16 | chrC:5084-6188 REVERSE
Length = 80
Score = 112 bits (280), Expect = 2e-025
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = +3
Query: 60 MVKLRLKRCGRKQRAVYRIVAIDVRSRREGRDLRKVGFYDPITNQTYLNLPAILDFLKKG 239
MVKLRLKRCGRKQRAVYRI+AIDVR RREGRDL KVGFYDPITNQT+LNL AILDFLKKG
Sbjct: 1 MVKLRLKRCGRKQRAVYRILAIDVRYRREGRDLSKVGFYDPITNQTFLNLSAILDFLKKG 60
Query: 240 LE 245
+
Sbjct: 61 AQ 62
>TAIR9_protein||AT1G73850.1 | Symbols: | structural constituent of ribosome |
chr1:27767949-27770386 FORWARD
Length = 560
Score = 53 bits (126), Expect = 1e-007
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +2
Query: 233 KGLRKKSWPQTWEGVQLLFAGIDIKLATRVFRMGKISKEQLLWCEEKMKKLNFSAG--KL 406
K +RKK E +++L ID+K+ +RV RM ++++E L WCEEKM K+ G L
Sbjct: 489 KYMRKKKM-SIEEEMEILMGLIDLKVVSRVLRMNEMNEENLHWCEEKMSKVKIIQGGKVL 547
Query: 407 QRHPSPVLFP 436
QR +P+ FP
Sbjct: 548 QRDSTPLFFP 557
>TAIR9_protein||AT4G34620.1 | Symbols: SSR16 | SSR16 (SMALL SUBUNIT RIBOSOMAL
PROTEIN 16); structural constituent of ribosome |
chr4:16535084-16536092 REVERSE
Length = 114
Score = 50 bits (117), Expect = 1e-006
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 63 VKLRLKRCGRKQRAVYRIVAIDVRSRREGRDLRKVGFYDPI 185
VK+RL R G K R YR+V D +SRR+G+ + +GFYDP+
Sbjct: 3 VKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPL 43
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,633,346,597
Number of Sequences: 33410
Number of Extensions: 18633346597
Number of Successful Extensions: 599326993
Number of sequences better than 0.0: 0
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