BLASTX 7.6.2
Query= UN36372 /QuerySize=1127
(1126 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 389 2e-108
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 84 1e-016
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 84 1e-016
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 84 1e-016
TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABI... 83 3e-016
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 80 2e-015
TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (... 74 1e-013
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 57 1e-008
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 57 2e-008
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 55 6e-008
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 55 7e-008
TAIR9_protein||AT1G62240.1 | Symbols: | unknown protein | chr1:... 53 4e-007
TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular... 52 6e-007
TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular... 52 6e-007
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 51 1e-006
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 50 3e-006
TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-re... 49 4e-006
TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein | ... 49 5e-006
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 389 bits (998), Expect = 2e-108
Identities = 204/255 (80%), Positives = 212/255 (83%), Gaps = 12/255 (4%)
Frame = +2
Query: 2 KPPGGNLGSNPLLDNNCQDPTKKTEAACDCHLNMNESLPNNHHSRVGSNNFEMSSTTENK 181
K GGNLGS L DNN QD KKTEAA DCH NMNESLP+NH S VGSNNF+MSSTTEN
Sbjct: 474 KISGGNLGSTSLQDNNSQDLIKKTEAAYDCHSNMNESLPHNHRSHVGSNNFDMSSTTENN 533
Query: 182 AFTKPGAPKVSSAGSSSVK----QPLPCDHHHHHSSYNPVHIPER-KLQPQRGSS---NE 337
AFTKPGAPKVSSAGSSSVK QPLPCDHH++H+SYN VH+ ER KL PQ GSS NE
Sbjct: 534 AFTKPGAPKVSSAGSSSVKHSSFQPLPCDHHNNHASYNLVHVAERKKLPPQCGSSNVYNE 593
Query: 338 ATEGNNNGVNYSVNGSGSGSGHGSNDPYGSSNGMNAGGMNTGSGNGAG----GSGDGSGS 505
EGNNN VNYSVNGS SGSGHGSN PYGSSNGMNAGGMN GS NGAG G G GSGS
Sbjct: 594 TIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGS 653
Query: 506 GSGSGTLADENKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTA 685
GSGSG LADENK+SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTA
Sbjct: 654 GSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTA 713
Query: 686 D*TNDNDIKNAEDS* 730
T+DNDIKN EDS*
Sbjct: 714 AATDDNDIKNIEDS* 728
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 84 bits (206), Expect = 1e-016
Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +2
Query: 407 SNDPYGSSNGMNAGGMNTGSGNGAGGSGDGSGSGSGSGTLADENKMSQREAALTKFRQKR 586
SN +S + AG +T G G + + SQREAAL KFR KR
Sbjct: 254 SNREKAASKEVEAGSQST--NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKR 311
Query: 587 KERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
K+RCF KKVRYQSRKKLAEQRPRV+GQFVR
Sbjct: 312 KDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 341
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 84 bits (206), Expect = 1e-016
Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +2
Query: 407 SNDPYGSSNGMNAGGMNTGSGNGAGGSGDGSGSGSGSGTLADENKMSQREAALTKFRQKR 586
SN +S + AG +T G G + + SQREAAL KFR KR
Sbjct: 86 SNREKAASKEVEAGSQST--NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKR 143
Query: 587 KERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
K+RCF KKVRYQSRKKLAEQRPRV+GQFVR
Sbjct: 144 KDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 84 bits (206), Expect = 1e-016
Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +2
Query: 407 SNDPYGSSNGMNAGGMNTGSGNGAGGSGDGSGSGSGSGTLADENKMSQREAALTKFRQKR 586
SN +S + AG +T G G + + SQREAAL KFR KR
Sbjct: 371 SNREKAASKEVEAGSQST--NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKR 428
Query: 587 KERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
K+RCF KKVRYQSRKKLAEQRPRV+GQFVR
Sbjct: 429 KDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator | chr5:24198215-24200502 REVERSE
Length = 496
Score = 83 bits (203), Expect = 3e-016
Identities = 43/72 (59%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +2
Query: 473 GAGGSGDGSGSGSGSGTLADENKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRP 652
G+ S D SG+ ++ +QREAAL KFR KRKERCF KKVRY SRKKLAEQRP
Sbjct: 420 GSSSSSDNPLKQQSSGS----DRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRP 475
Query: 653 RVRGQFVRKTAD 688
V+GQF+RK D
Sbjct: 476 HVKGQFIRKRDD 487
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 80 bits (196), Expect = 2e-015
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +2
Query: 548 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 679
QREAALTKFR KRK+RC+ KKVRY+SRKKLAEQRPR++GQFVR+
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQ 660
>TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component response
regulator | chr5:24675540-24678176 FORWARD
Length = 619
Score = 74 bits (181), Expect = 1e-013
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 536 NKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 679
NK+ +RE AL KFR+KR +RCF KK+RY +RK+LAE+RPRV+GQFVRK
Sbjct: 528 NKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 57 bits (137), Expect = 1e-008
Identities = 23/46 (50%), Positives = 38/46 (82%)
Frame = +2
Query: 548 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTA 685
+REA + ++++KR+ R F KK+RY+ RK AEQRPR++G+FV++T+
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 57 bits (136), Expect = 2e-008
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +2
Query: 479 GGSGDGSGSGSGSGTLADENKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRV 658
G DG G + + REA++ ++++KR+ R F KK+RYQ RK A+QRPR+
Sbjct: 317 GSDADGVDFHVRLGEIDLFGESGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRM 376
Query: 659 RGQFVRK 679
+G+FVR+
Sbjct: 377 KGRFVRR 383
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 55 bits (132), Expect = 6e-008
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +2
Query: 551 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 679
REA++ ++++KR+ R F KK+RYQ RK A+QRPR++G+FVR+
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 55 bits (131), Expect = 7e-008
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +2
Query: 551 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 679
REA+L ++++KR+ R F K++RYQ RK AE+RPRV+G+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>TAIR9_protein||AT1G62240.1 | Symbols: | unknown protein |
chr1:22994640-22995323 FORWARD
Length = 228
Score = 53 bits (125), Expect = 4e-007
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 323 GSSNEATEGNNNGVNY-SVNGSGSGSGHGSNDPYGSSNGMNAGGMNTGSGNGAGGSGDGS 499
GS+ G+ +G Y S +G S SG S G +G +GG G G+G+ GSG GS
Sbjct: 112 GSNGSFFNGSGSGTGYGSGDGRVSSSGEYSASAGGGGSGEGSGG--GGGGDGSSGSGSGS 169
Query: 500 GSGSGSGT 523
GSGSGSGT
Sbjct: 170 GSGSGSGT 177
>TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants
- 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 411
Score = 52 bits (123), Expect = 6e-007
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 503 SGSGSGTLADENKMS--QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
+G TL K+S QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 293 NGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
>TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7688 Blast hits to 4734 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 118; Plants
- 919; Viruses - 0; Other Eukaryotes - 6470 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 410
Score = 52 bits (123), Expect = 6e-007
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 503 SGSGSGTLADENKMS--QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
+G TL K+S QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 292 NGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 351
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 51 bits (121), Expect = 1e-006
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 551 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 679
REA + ++R+KRK R F K +RY SRK AE RPRV G+F ++
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 50 bits (117), Expect = 3e-006
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 503 SGSGSGTLADENKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
SG +R+ ++K+R KR +R F K ++Y RK LA+ RPRVRG+F R
Sbjct: 176 SGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR 233
>TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-related |
chr1:1221757-1224235 REVERSE
Length = 387
Score = 49 bits (116), Expect = 4e-006
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 548 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 676
QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 287 QRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 329
>TAIR9_protein||AT4G30460.1 | Symbols: | glycine-rich protein |
chr4:14889246-14889734 REVERSE
Length = 163
Score = 49 bits (115), Expect = 5e-006
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 326 SSNEATEGNNNGVNYSVNGSGSGSGHGSNDPYGSSNGMNAGGMNTGSGNGAGGSGDGSGS 505
SS+ G+ S GS +GSG G G G GG + G G G GG G G GS
Sbjct: 82 SSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHGGGGGGGGGRGGGGGS 141
Query: 506 GSGSG 520
G+G G
Sbjct: 142 GNGEG 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,633,346,597
Number of Sequences: 33410
Number of Extensions: 18633346597
Number of Successful Extensions: 599326993
Number of sequences better than 0.0: 0
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