BLASTX 7.6.2
Query= UN36441 /QuerySize=836
(835 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis ... 232 7e-059
gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis ... 231 1e-058
gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containi... 203 4e-050
gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana] 194 2e-047
gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidops... 191 1e-046
gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis ... 190 4e-046
gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis ... 188 1e-045
gi|297807065|ref|XP_002871416.1| hypothetical protein ARALYDRAFT... 186 3e-045
gi|15220334|ref|NP_172594.1| F-box and associated interaction do... 178 9e-043
gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana] 175 1e-041
gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis ... 170 3e-040
gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidops... 166 5e-039
gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana] 162 9e-038
gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis tha... 159 7e-037
gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis ... 146 4e-033
gi|186478478|ref|NP_001117286.1| F-box domain-containing protein... 128 1e-027
gi|116830221|gb|ABK28068.1| unknown [Arabidopsis thaliana] 128 1e-027
gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis th... 123 4e-026
gi|15234258|ref|NP_192073.1| F-box associated ubiquitination eff... 123 4e-026
gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis ... 105 1e-020
>gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 232 bits (590), Expect = 7e-059
Identities = 125/209 (59%), Positives = 146/209 (69%), Gaps = 14/209 (6%)
Frame = -3
Query: 824 EKRLPHPRTDLGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPY 645
+K + P LG GKDK+ GTYK VWL+NSS F L+NATTCE+FDFTTNAWRYV+ ASPY
Sbjct: 150 KKDVNFPSPKLGLGKDKLTGTYKPVWLYNSSIFGLENATTCELFDFTTNAWRYVVLASPY 209
Query: 644 RIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDN 465
+I KPVY DGSLYW T+CEE K LS DLHT+TFQVIC APF+H + R + +CILDN
Sbjct: 210 QINAYHKPVYLDGSLYWFTDCEEPKVLSLDLHTETFQVICKAPFAHPCDPRQLTMCILDN 269
Query: 464 RLCVSLKIHPTQTQVIWSLGGGGGNMMMMTWKQMCSIDLTKTY--FYQPPYSRPPALLPI 291
RLCVS K P TQVIWS G TW QMC IDLT+T+ F P + AL PI
Sbjct: 270 RLCVSEKKWP--TQVIWSFHPSG-----KTWNQMCCIDLTQTFSWFGVPKF----ALSPI 318
Query: 290 AIVDE-TILLLGKRRGPPLVIHDLRTKSY 207
AI+D+ +LL G+ LVIHDL TKSY
Sbjct: 319 AIMDKGKLLLQGRDTSHALVIHDLHTKSY 347
>gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 231 bits (588), Expect = 1e-058
Identities = 129/217 (59%), Positives = 148/217 (68%), Gaps = 10/217 (4%)
Frame = -3
Query: 794 LGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
LGFG+DKVRGTYK VWL+NSSE+ L+N TTCEVFDF+TNAWR++ AS YRI+ D PVY
Sbjct: 175 LGFGRDKVRGTYKPVWLYNSSEYGLENITTCEVFDFSTNAWRFLHQASLYRILGDHYPVY 234
Query: 614 FDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHP 435
DGSLYW TECEETK LSFDLHT+TFQVI PF HV + +CILDNRLCVS P
Sbjct: 235 LDGSLYWFTECEETKVLSFDLHTETFQVISKTPFPHVLDPLGFTMCILDNRLCVSETNWP 294
Query: 434 TQTQVIWSLGGGGGNMMMMTWKQMCSIDLTKTY-FYQPPYSRPPALLPIAIVDETILLLG 258
TQVIWS GG M WK++CSIDLT+T Y SR L PIAI+D+T LLL
Sbjct: 295 --TQVIWSFDSSGG---MEPWKKLCSIDLTETISLYGKAVSR---LFPIAILDKTKLLLH 346
Query: 257 KRRG-PPLVIHDLRTKSYVLDPFPNTLEYPVCYFPSL 150
R P VI+DL+TKSY + P T Y SL
Sbjct: 347 SRSYLQPAVIYDLQTKSYGVLFTPTTRGSSAFYSQSL 383
>gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containing protein
[Arabidopsis thaliana]
Length = 382
Score = 203 bits (514), Expect = 4e-050
Identities = 116/220 (52%), Positives = 141/220 (64%), Gaps = 9/220 (4%)
Frame = -3
Query: 794 LGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
LGFGKDK+ GTYK VWL+NS E L+NATTCEVFDF+TNAWRYV PA+PYRI+ PV
Sbjct: 167 LGFGKDKLTGTYKPVWLYNSIEIGLENATTCEVFDFSTNAWRYVSPAAPYRIVGCPAPVC 226
Query: 614 FDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHP 435
DGSL+W TECEETK LSFDLHT+TFQV+ APF++V +V+C LDNRLCVS P
Sbjct: 227 VDGSLHWFTECEETKILSFDLHTETFQVVSKAPFANVDGFD-IVMCNLDNRLCVSEMKLP 285
Query: 434 TQTQVIWSLGGGGGNMMMMTWKQMCSIDLTKTYF--YQPPYSRPPALLPIAIVDETILLL 261
QVIWS G M ++D+T +F Q P ALL + LL
Sbjct: 286 --NQVIWSFNSGNKTWHKMC---SINLDITSRWFGPTQVCAVLPLALLDGKKKKKKKLLF 340
Query: 260 GKR-RGPPLVIHDLRTKSYVLDPFPNTLEYPVCYFPSLFS 144
R R +V+HD TKSY + +++ +PVCYFPSL S
Sbjct: 341 YCRVRKRTMVVHDDETKSYDVAFEADSIGHPVCYFPSLIS 380
>gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana]
Length = 445
Score = 194 bits (492), Expect = 2e-047
Identities = 111/221 (50%), Positives = 136/221 (61%), Gaps = 17/221 (7%)
Frame = -3
Query: 791 GFGKDKVRGTYKAVWLFNSSEFDL-DNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
GFGKDK+ GTYK VWL+NS+E DL D TTCEVFDF TNAWRYV PASP+ I+ Q PVY
Sbjct: 231 GFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYVFPASPHLILHTQDPVY 290
Query: 614 FDGSLYWLTECE---ETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLK 444
DGSL+W T ET LS DLH++TFQVI APF +V + ++V+C L +RLCVS +
Sbjct: 291 VDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFLNVSDEYYIVMCNLGDRLCVSEQ 350
Query: 443 IHPTQTQVIWSLGGGGGNMMMMTWKQMCSIDL--TKTYFYQPPYSRPPALLPIAIVD-ET 273
P QVIWSL TWKQ+ SIDL T + F+ + A P+A++D +
Sbjct: 351 KWP--NQVIWSLDDSDHK----TWKQIYSIDLIITSSLFFSAIF----AFTPLAVLDKDK 400
Query: 272 ILLLGKRRGPPLVIHDLRTKSYVLDPFPNTLEYPVCYFPSL 150
+L G + HD TKSY L N VCYFPSL
Sbjct: 401 LLFYDSTHGDAFLTHDPDTKSYDLPYTSNRCATVVCYFPSL 441
>gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 309
Score = 191 bits (484), Expect = 1e-046
Identities = 97/147 (65%), Positives = 113/147 (76%), Gaps = 5/147 (3%)
Frame = -3
Query: 806 PRTDLGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQ 627
P LGFGKDK++GT+K VWL+NSSEF LDN TTCEVFDF+TNAWRYV PASPYRI + Q
Sbjct: 162 PDPKLGFGKDKLKGTFKQVWLYNSSEFGLDNVTTCEVFDFSTNAWRYVHPASPYRINDYQ 221
Query: 626 KPVYFDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSL 447
PVYFDGSL+WLTE +E K LSFDLHT+TFQVIC APF + +CILDNRLCVS
Sbjct: 222 DPVYFDGSLHWLTEGKECKILSFDLHTETFQVICKAPFLCERDPVGDTMCILDNRLCVS- 280
Query: 446 KIHPTQTQVIWSLGGGGGNMMMMTWKQ 366
+I+ + Q+IWSL GGN TWK+
Sbjct: 281 EINGS-AQLIWSLDSSGGN---KTWKK 303
>gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 190 bits (480), Expect = 4e-046
Identities = 105/188 (55%), Positives = 129/188 (68%), Gaps = 10/188 (5%)
Frame = -3
Query: 806 PRTDLGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQ 627
P +LGFG+DK GTYK VWL+NSS+F L NATTCEVFDF+TN WRYV P+ P+RI +
Sbjct: 169 PMPNLGFGRDKFTGTYKPVWLYNSSDFGLPNATTCEVFDFSTNTWRYVHPSPPHRIDDFI 228
Query: 626 KPVYFDGSLYWLTEC-EETKSLSFDLHTDTFQVICNAPFS--HVPNLRFVVLCILDNRLC 456
PVY DGSL+WL E EETK LSFDLH++TF V+C APF+ H P + ILDNRLC
Sbjct: 229 NPVYLDGSLHWLAEGEEETKVLSFDLHSETFHVLCKAPFARDHFPFSH--NMFILDNRLC 286
Query: 455 VSLKIHPTQTQVIWSLGGGGGNMMMMTWKQMCSIDLTKTYFYQPPYSRPPALLPIAIVDE 276
VS + + TQVIWS GGN TW ++CSID+T+T + + P L PIAI+D+
Sbjct: 287 VSEQ--DSSTQVIWSFHSSGGN-KNKTWNKLCSIDVTRTRSWFIDINFP--LAPIAILDK 341
Query: 275 TILLLGKR 252
LLL R
Sbjct: 342 NKLLLQGR 349
>gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 188 bits (475), Expect = 1e-045
Identities = 94/166 (56%), Positives = 114/166 (68%), Gaps = 7/166 (4%)
Frame = -3
Query: 794 LGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
LGFGKDK GTYK VWL+NS E L+NATTCEVFDFTTNAWRYV PA+PYR++ PVY
Sbjct: 168 LGFGKDKFTGTYKPVWLYNSLEIGLENATTCEVFDFTTNAWRYVTPAAPYRVVHFPDPVY 227
Query: 614 FDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHP 435
DGSL+W T+C+ETK +SFDLHT+ FQVI APF+ N +V+C LDNRLCVS + P
Sbjct: 228 VDGSLHWFTDCQETKVVSFDLHTEAFQVISKAPFAKNENPFDIVMCNLDNRLCVSQQKWP 287
Query: 434 TQTQVIWSLGGGGGNMMMMTWKQMCSIDLTKTYFYQPPYSRPPALL 297
QVIWS TW++M SID+T + + + PP L
Sbjct: 288 --NQVIWSFHSNN-----KTWEKMYSIDVTVSLVGKHICALPPLAL 326
>gi|297807065|ref|XP_002871416.1| hypothetical protein ARALYDRAFT_487863
[Arabidopsis lyrata subsp. lyrata]
Length = 378
Score = 186 bits (472), Expect = 3e-045
Identities = 111/229 (48%), Positives = 138/229 (60%), Gaps = 19/229 (8%)
Frame = -3
Query: 815 LPHPRTDLGFGKDKVRGTYKAVWLFNSSEFDL-DNATTCEVFDFTTNAWRYVLPASPYRI 639
+P+P GFGKDK+ GTYK VWL+NS+E L D ATTCEVFDF TNAWRY+ PASP+ I
Sbjct: 158 VPYPTP--GFGKDKISGTYKPVWLYNSAELGLNDKATTCEVFDFATNAWRYIFPASPHLI 215
Query: 638 IEDQKPVYFDGSLYWLTECE---ETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILD 468
+ Q PVY DGSL+W T ET LS DLH++ FQVI APF +V + +V+C LD
Sbjct: 216 LHTQYPVYVDGSLHWFTALSHEGETMVLSLDLHSEIFQVISKAPFLNVSDEYKIVMCNLD 275
Query: 467 NRLCVSLKIHPTQTQVIWSLGGGGGNMMMMTWKQMCSIDL--TKTYFYQPPYSRPPALLP 294
+RLCVS + P QVIWSL TWKQ+ SIDL T + F + A P
Sbjct: 276 DRLCVSEEKWP--NQVIWSLDDSDHK----TWKQIYSIDLIITSSLFGITRF----AFTP 325
Query: 293 IAIVD-ETILLLGKRRGPPLVIHDLRTKSYVLDPFPNTLEYPVCYFPSL 150
+A++D + +L + G + HD TKSY L VCYFPSL
Sbjct: 326 LAVLDKDKLLFYDREHGNAFLTHDPDTKSYDLPYTSKRWARVVCYFPSL 374
>gi|15220334|ref|NP_172594.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 312
Score = 178 bits (451), Expect = 9e-043
Identities = 89/145 (61%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Frame = -3
Query: 824 EKRLPHPRTDLGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPY 645
+K P L FGKDK+ GTYK VWL+NSSEF LD+ TTCEVFDF+ NAWRYV PASPY
Sbjct: 168 KKEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSNNAWRYVHPASPY 227
Query: 644 RIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDN 465
RI + Q PVY DGS++WLTE +E+K LSF LHT+TFQV+C APF + +CILDN
Sbjct: 228 RINDYQDPVYSDGSVHWLTEGKESKILSFHLHTETFQVLCEAPFLRERDPVGDSMCILDN 287
Query: 464 RLCVSLKIHPTQTQVIWSLGGGGGN 390
RLCVS P Q+IWSL GGN
Sbjct: 288 RLCVSEINGP--AQLIWSLDSSGGN 310
>gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana]
Length = 796
Score = 175 bits (442), Expect = 1e-041
Identities = 86/132 (65%), Positives = 98/132 (74%), Gaps = 3/132 (2%)
Frame = -3
Query: 794 LGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
LGFGKDK RGTYK VWL+NS+E L NATTCEVFDF+TNAWRYV A+PYRI PVY
Sbjct: 619 LGFGKDKFRGTYKPVWLYNSAEIGLKNATTCEVFDFSTNAWRYVTLAAPYRIAAYPAPVY 678
Query: 614 FDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHP 435
DGSLYW TEC+ETK L F+LHT+TFQV+C APF++V + +V LDNRLCVS P
Sbjct: 679 LDGSLYWFTECKETKVLPFNLHTETFQVVCKAPFANVDPYK-IVFYNLDNRLCVSEMKWP 737
Query: 434 TQTQVIWSLGGG 399
QVIWS G
Sbjct: 738 --NQVIWSFNSG 747
>gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 170 bits (429), Expect = 3e-040
Identities = 81/137 (59%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
Frame = -3
Query: 818 RLPHPRTDLGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRI 639
+L HP L FGKD GT+K VWL+NSSE + NATTCEVFDF+TNAWRYV P++PYR+
Sbjct: 121 KLKHPHFKLAFGKDTFSGTFKPVWLYNSSEISIQNATTCEVFDFSTNAWRYVTPSAPYRV 180
Query: 638 IEDQKPVYFDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFS-HVPNLRFVVLCILDNR 462
+ PV+ DGSL+W T+C+ETK LS DLHT+ FQVI APF+ HV +V+C LDNR
Sbjct: 181 LGLPDPVFLDGSLHWFTDCQETKILSMDLHTEAFQVISKAPFADHVVRPYDIVMCNLDNR 240
Query: 461 LCVSLKIHPTQTQVIWS 411
LCVS P Q+IWS
Sbjct: 241 LCVSEMKWP--NQLIWS 255
>gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 374
Score = 166 bits (419), Expect = 5e-039
Identities = 80/122 (65%), Positives = 91/122 (74%), Gaps = 6/122 (4%)
Frame = -3
Query: 794 LGFGKDKVRGTYKAVWLFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVY 615
LGFGKDK+ GTYK VWL+NS E L+NATTCEVFDF+TNAWRYV PA+PYRI+ PV
Sbjct: 168 LGFGKDKLTGTYKPVWLYNSLEIGLENATTCEVFDFSTNAWRYVSPAAPYRIVGCPSPVC 227
Query: 614 FDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHP 435
DGSL+W TECEETK LSFDLHT+TFQV+ APF++V LDNRLCVS P
Sbjct: 228 VDGSLHWFTECEETKILSFDLHTETFQVVSKAPFANVDGFH------LDNRLCVSEMKRP 281
Query: 434 TQ 429
Q
Sbjct: 282 KQ 283
>gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana]
Length = 391
Score = 162 bits (408), Expect = 9e-038
Identities = 96/197 (48%), Positives = 121/197 (61%), Gaps = 18/197 (9%)
Frame = -3
Query: 719 DNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDT 540
+ +T CEVFDFTT AWR+V+PASPYRI+ Q PVY DGSL+WLTE E T LSFDLH +T
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 539 FQVICNAPFSHVPNL--RFVVLCILDNRLCVSLKIHPTQTQVIWSLGGGGGNMMMMTWKQ 366
FQV+ APF H + R +++C LD+RLCVS K+ P QVIWSL TWK+
Sbjct: 262 FQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSD-----HKTWKE 314
Query: 365 MCSIDL--TKTYFYQPPYSRPPALLPIAIVD-ETILLLGKRRGPPLVIHDLRTKSYVLDP 195
+ SIDL T + F + AL P+ + D + +L G L+ HD +TKSY D
Sbjct: 315 IYSIDLNITSSLFGSNGF----ALRPLGVFDKDKLLFCEPEYGDQLLTHDPKTKSYEFDY 370
Query: 194 --FPNTLEYPVCYFPSL 150
F T P+CYF SL
Sbjct: 371 RFFSPTTALPLCYFQSL 387
>gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis thaliana]
Length = 391
Score = 159 bits (400), Expect = 7e-037
Identities = 95/197 (48%), Positives = 120/197 (60%), Gaps = 18/197 (9%)
Frame = -3
Query: 719 DNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDT 540
+ +T CEVFDFTT AWR+V+PASPYRI+ Q PVY DGSL+WLTE E T LSFDLH +T
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 539 FQVICNAPFSHVPNL--RFVVLCILDNRLCVSLKIHPTQTQVIWSLGGGGGNMMMMTWKQ 366
FQV+ APF H + R +++C LD+RLCVS K+ P QVIWSL TWK+
Sbjct: 262 FQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSD-----HKTWKE 314
Query: 365 MCSIDL--TKTYFYQPPYSRPPALLPIAIVD-ETILLLGKRRGPPLVIHDLRTKSYVLDP 195
+ SIDL T + F + AL P+ + D + +L G L+ D +TKSY D
Sbjct: 315 VYSIDLNITSSLFGSNGF----ALRPLGVFDKDKLLFCEPEYGDQLLTRDPKTKSYEFDY 370
Query: 194 --FPNTLEYPVCYFPSL 150
F T P+CYF SL
Sbjct: 371 RFFSPTTALPLCYFQSL 387
>gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 146 bits (368), Expect = 4e-033
Identities = 65/103 (63%), Positives = 81/103 (78%), Gaps = 5/103 (4%)
Frame = -3
Query: 797 DLGFGKDKVRGTYKAVWLFNSSEFDLDNA-----TTCEVFDFTTNAWRYVLPASPYRIIE 633
D+GFGKDK+ GTYK VWL++S E L+NA TTCEVFDF T+AWRYV PA+PYR+
Sbjct: 36 DIGFGKDKITGTYKPVWLYSSLEIGLENARFSTLTTCEVFDFNTDAWRYVSPAAPYRVFG 95
Query: 632 DQKPVYFDGSLYWLTECEETKSLSFDLHTDTFQVICNAPFSHV 504
+ KP+ DGSL+W +CEETK LSFDLHT+TFQV+ APF++V
Sbjct: 96 NSKPICIDGSLHWFNDCEETKILSFDLHTETFQVVSKAPFTNV 138
>gi|186478478|ref|NP_001117286.1| F-box domain-containing protein [Arabidopsis
thaliana]
Length = 192
Score = 128 bits (321), Expect = 1e-027
Identities = 68/134 (50%), Positives = 88/134 (65%), Gaps = 10/134 (7%)
Frame = -3
Query: 746 LFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQK---PVYFDGSLYWLTECEE 576
++NSSE L+NATTCEVFDF+TN WRY+ P+SPYRI +Y DGSLYWLT +E
Sbjct: 1 MYNSSELGLENATTCEVFDFSTNTWRYINPSSPYRINTSSSRGHALYVDGSLYWLTGKKE 60
Query: 575 TKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHPTQTQVIWSLGGGG 396
K L+ DLHT+TFQVI APF+ + R ++ L+NRLC+S+ P Q +IWS
Sbjct: 61 IKVLALDLHTETFQVISKAPFAEADH-RNIITRSLNNRLCLSVS-KPLQQMIIWSF---- 114
Query: 395 GNMMMMTWKQMCSI 354
N TW+Q+ SI
Sbjct: 115 -NSENKTWEQIYSI 127
>gi|116830221|gb|ABK28068.1| unknown [Arabidopsis thaliana]
Length = 193
Score = 128 bits (321), Expect = 1e-027
Identities = 68/134 (50%), Positives = 88/134 (65%), Gaps = 10/134 (7%)
Frame = -3
Query: 746 LFNSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQK---PVYFDGSLYWLTECEE 576
++NSSE L+NATTCEVFDF+TN WRY+ P+SPYRI +Y DGSLYWLT +E
Sbjct: 1 MYNSSELGLENATTCEVFDFSTNTWRYINPSSPYRINTSSSRGHALYVDGSLYWLTGKKE 60
Query: 575 TKSLSFDLHTDTFQVICNAPFSHVPNLRFVVLCILDNRLCVSLKIHPTQTQVIWSLGGGG 396
K L+ DLHT+TFQVI APF+ + R ++ L+NRLC+S+ P Q +IWS
Sbjct: 61 IKVLALDLHTETFQVISKAPFAEADH-RNIITRSLNNRLCLSVS-KPLQQMIIWSF---- 114
Query: 395 GNMMMMTWKQMCSI 354
N TW+Q+ SI
Sbjct: 115 -NSENKTWEQIYSI 127
>gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis thaliana]
Length = 311
Score = 123 bits (307), Expect = 4e-026
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 8/106 (7%)
Frame = -3
Query: 719 DNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDT 540
+ +T C+VFDFTT AWR+V+PASPYRI+ Q PVY DGSL+WLT T LSFDLHT+T
Sbjct: 126 NTSTFCQVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLT----TNVLSFDLHTET 181
Query: 539 FQVICNAPFSHVPNL--RFVVLCILDNRLCVSLKIHPTQTQVIWSL 408
FQV+ APF H + R +++C LD+RLCVS K+ P QVIWSL
Sbjct: 182 FQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSL 225
>gi|15234258|ref|NP_192073.1| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 300
Score = 123 bits (307), Expect = 4e-026
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 8/106 (7%)
Frame = -3
Query: 719 DNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVYFDGSLYWLTECEETKSLSFDLHTDT 540
+ +T C+VFDFTT AWR+V+PASPYRI+ Q PVY DGSL+WLT T LSFDLHT+T
Sbjct: 115 NTSTFCQVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLT----TNVLSFDLHTET 170
Query: 539 FQVICNAPFSHVPNL--RFVVLCILDNRLCVSLKIHPTQTQVIWSL 408
FQV+ APF H + R +++C LD+RLCVS K+ P QVIWSL
Sbjct: 171 FQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSL 214
>gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 105 bits (260), Expect = 1e-020
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = -3
Query: 740 NSSEFDLDNATTCEVFDFTTNAWRYVLPASPYRIIEDQKPVYFDGSLYWLTECEETKSLS 561
N + + + +T CEVFDFT+ AWRYV+PASPY I+ Q PVY DGSL+WLT E T LS
Sbjct: 174 NDDDDNNNTSTICEVFDFTSKAWRYVVPASPYPILPYQDPVYVDGSLHWLTAGETTNVLS 233
Query: 560 FDLHTDTFQVICNAPFSH 507
FDLHT+TFQV+ APF H
Sbjct: 234 FDLHTETFQVMSKAPFLH 251
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,100,172,876,348
Number of Sequences: 15229318
Number of Extensions: 4100172876348
Number of Successful Extensions: 984362955
Number of sequences better than 0.0: 0
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