BLASTX 7.6.2
Query= UN36637 /QuerySize=851
(850 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G48210.1 | Symbols: | FUNCTIONS IN: molecular... 168 7e-042
>TAIR9_protein||AT3G48210.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 142 Blast hits to 142 proteins
in 51 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 34;
Plants - 34; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
chr3:17849435-17851396 FORWARD
Length = 316
Score = 168 bits (423), Expect = 7e-042
Identities = 91/134 (67%), Positives = 111/134 (82%), Gaps = 6/134 (4%)
Frame = +3
Query: 54 MEQIS----GDTRKNN--TMGIVCEKDI*EQRLQIDSFIASPFHRSMDSLLDRAKATAQS 215
MEQIS GDT K ++G++CEKDI EQRL+IDSFIASPF RSM+SL++RA+ATAQS
Sbjct: 1 MEQISNIAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQS 60
Query: 216 QVELANVKADLKEAEYELVKVLSAKTHKEAMQMGLRDSISATQSRIQVLKRTLQLHKSKK 395
QVEL N+KADL+EAE ELVKVL+ KT KEA QMG+RDSISATQSRI+VL+R LQL KSKK
Sbjct: 61 QVELMNLKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKK 120
Query: 396 EERAKTISQRTRCL 437
++ + ISQ+ + L
Sbjct: 121 DDSVRIISQQLQAL 134
Score = 59 bits (140), Expect = 4e-009
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +2
Query: 419 PENKVSKVQVNRRQKRSSNSPLQSPAPTSSTRRSSRLK 532
PENK SKVQVNRRQKR S SPL +P TS+TRRSSR K
Sbjct: 275 PENKRSKVQVNRRQKRGSESPLLAPVSTSATRRSSRFK 312
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,678,779,642
Number of Sequences: 33410
Number of Extensions: 18678779642
Number of Successful Extensions: 599407261
Number of sequences better than 0.0: 0
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