BLASTX 7.6.2
Query= UN36701 /QuerySize=584
(583 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G65700.1 | Symbols: | small nuclear ribonucle... 190 7e-049
TAIR9_protein||AT1G65700.2 | Symbols: | small nuclear ribonucle... 190 7e-049
TAIR9_protein||AT1G19120.1 | Symbols: | small nuclear ribonucle... 66 2e-011
TAIR9_protein||AT3G14080.1 | Symbols: | small nuclear ribonucle... 62 2e-010
TAIR9_protein||AT3G14080.2 | Symbols: | small nuclear ribonucle... 62 2e-010
>TAIR9_protein||AT1G65700.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr1:24434463-24435870 REVERSE
Length = 99
Score = 190 bits (481), Expect = 7e-049
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3
Query: 84 MATTTGLESLVDQIISVITNDGRNIVGLLKGFDQATNIILDESHERVFSTKEGVQQHVLG 263
MA TTGLE+LVDQIISVITNDGRNIVG+LKGFDQATNIILDESHERVFSTKEGVQQHVLG
Sbjct: 1 MAATTGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLG 60
Query: 264 LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH* 380
LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH*
Sbjct: 61 LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH* 99
>TAIR9_protein||AT1G65700.2 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr1:24434463-24435870 REVERSE
Length = 99
Score = 190 bits (481), Expect = 7e-049
Identities = 95/99 (95%), Positives = 97/99 (97%)
Frame = +3
Query: 84 MATTTGLESLVDQIISVITNDGRNIVGLLKGFDQATNIILDESHERVFSTKEGVQQHVLG 263
MA TTGLE+LVDQIISVITNDGRNIVG+LKGFDQATNIILDESHERVFSTKEGVQQHVLG
Sbjct: 1 MAATTGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLG 60
Query: 264 LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH* 380
LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH*
Sbjct: 61 LYIIRGDNIGVIGELDEELDASLDFSKLRAHPLKPVVH* 99
>TAIR9_protein||AT1G19120.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr1:6608288-6609162 FORWARD
Length = 129
Score = 66 bits (159), Expect = 2e-011
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Frame = +3
Query: 93 TTGLESLVDQIISVITNDGRNIVGLLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYI 272
+T L + +D+ + V+ DGR ++GLL+ FDQ N +L+E++ERV + LGLYI
Sbjct: 12 STSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVI-VGDLYCDIPLGLYI 70
Query: 273 IRGDNIGVIGELD---EELDASL 332
IRG+N+ +IGELD EEL A +
Sbjct: 71 IRGENVVLIGELDVEKEELPAHM 93
>TAIR9_protein||AT3G14080.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr3:4667717-4668989 FORWARD
Length = 129
Score = 62 bits (149), Expect = 2e-010
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 93 TTGLESLVDQIISVITNDGRNIVGLLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYI 272
+T L S +D+ + V+ DGR ++G L+ FDQ N +L+ + ERV E LGLY+
Sbjct: 12 STSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVI-VGEQYCDIPLGLYV 70
Query: 273 IRGDNIGVIGELDEE 317
IRG+N+ +IGELD E
Sbjct: 71 IRGENVVLIGELDTE 85
>TAIR9_protein||AT3G14080.2 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr3:4667717-4668989 FORWARD
Length = 129
Score = 62 bits (149), Expect = 2e-010
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +3
Query: 93 TTGLESLVDQIISVITNDGRNIVGLLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYI 272
+T L S +D+ + V+ DGR ++G L+ FDQ N +L+ + ERV E LGLY+
Sbjct: 12 STSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVI-VGEQYCDIPLGLYV 70
Query: 273 IRGDNIGVIGELDEE 317
IRG+N+ +IGELD E
Sbjct: 71 IRGENVVLIGELDTE 85
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,722,494,304
Number of Sequences: 33410
Number of Extensions: 18722494304
Number of Successful Extensions: 599467784
Number of sequences better than 0.0: 0
|
