Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN36703


BLASTX 7.6.2

Query= UN36703 /QuerySize=978
        (977 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297825975|ref|XP_002880870.1| hypothetical protein ARALYDRAFT...    173   7e-041
gi|297793419|ref|XP_002864594.1| hypothetical protein ARALYDRAFT...    166   8e-039
gi|297825969|ref|XP_002880867.1| hypothetical protein ARALYDRAFT...    153   7e-035
gi|297796875|ref|XP_002866322.1| hypothetical protein ARALYDRAFT...    149   6e-034
gi|297793443|ref|XP_002864606.1| hypothetical protein ARALYDRAFT...     89   1e-015
gi|15220245|ref|NP_174823.1| NAC (No Apical Meristem) domain tra...     84   2e-014
gi|15238786|ref|NP_197331.1| NAC domain containing protein 88 [A...     70   4e-010
gi|297807857|ref|XP_002871812.1| hypothetical protein ARALYDRAFT...     67   4e-009
gi|297843158|ref|XP_002889460.1| hypothetical protein ARALYDRAFT...     60   4e-007
gi|297848614|ref|XP_002892188.1| hypothetical protein ARALYDRAFT...     60   4e-007
gi|7485916|pir||T00909 hypothetical protein F21B7.23 - Arabidops...     59   8e-007
gi|145335034|ref|NP_171848.3| NAC domain-containing protein 6 [A...     59   8e-007

>gi|297825975|ref|XP_002880870.1| hypothetical protein ARALYDRAFT_901538
        [Arabidopsis lyrata subsp. lyrata]

          Length = 323

 Score =  173 bits (436), Expect = 7e-041
 Identities = 103/231 (44%), Positives = 136/231 (58%), Gaps = 23/231 (9%)
 Frame = +3

Query: 111 EDGGIYFNPEDQELIKLHLLPKLETYRKPKSKDKEFEDFIEMKNVYDKEPWLLDHTNHPL 290
           ED GI F+P  QE+I        E Y K K + ++  DFI MK+VY KEPWLLDH N+  
Sbjct:   8 EDEGIQFDPTYQEVI--------EEYLKRKLRGEDCGDFILMKDVYAKEPWLLDHPNNSF 59

Query: 291 FRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNGDN----DGGSWKPNAKKYIEDEETGETI 458
           F+++EW+YF TR+Q+S K IGRG+  KR++ GDN    D G+W+ N K+ I DE+TG  I
Sbjct:  60 FKEDEWYYFSTRTQISEKKIGRGKYPKRKITGDNNDGIDRGNWRINGKENIIDEDTGAII 119

Query: 459 G--KKQTLKFTKSDKKKQKRGDCTSFVVPGSNSSWIMHEYSL----PDENTFQELVLCKI 620
           G  K  T K TK++ KKQKRGD  S   PGS S WIM E+ +    PDE+ FQELVLCKI
Sbjct: 120 GIKKNLTYKGTKTN-KKQKRGDGAS--APGSESGWIMDEFVIVLPKPDEDKFQELVLCKI 176

Query: 621 RKISNS-KDEDDH-HNVVEDGSIGDLSDKLASTGLDDRQQTLIYAAPPATP 767
            K   S KD+ DH H          +  + +     + +  L  ++ P  P
Sbjct: 177 HKKKKSKKDKKDHQHEASSSSEQQPIKKRKSKKSKKEHESVLAASSEPQQP 227

>gi|297793419|ref|XP_002864594.1| hypothetical protein ARALYDRAFT_919094
        [Arabidopsis lyrata subsp. lyrata]

          Length = 293

 Score =  166 bits (418), Expect = 8e-039
 Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 17/189 (8%)
 Frame = +3

Query: 111 EDGGIYFNPEDQELIKLHLLPKLETYRKPKSKDKEFEDFIEMKNVYDKEPWLLDHTNHPL 290
           ED GI+F+P  +E+I          Y KPK + ++  DFI MK+VY KEPWLLDH N+  
Sbjct:   8 EDEGIHFDPTYEEVI--------HKYLKPKQRGEDCGDFILMKDVYAKEPWLLDHPNNSF 59

Query: 291 FRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNGDN--DGGSWKPNAKKYIEDEETGETIGK 464
           F+++EW+YF TR+Q+S K IGRG+  KR+++ ++  D G+W+ NAK+ I D++TG+ IG 
Sbjct:  60 FKEDEWYYFSTRTQISEKKIGRGKYPKRKIDNNDGIDRGNWRINAKEDIIDKDTGDIIGI 119

Query: 465 KQTLKFTKSD-KKKQKRGDCTSFVVPGSNSSWIMHEYSL----PDENTFQELVLCKIRKI 629
           K+ L +  ++  KKQKRGD  S   P S S WIM E+ +    PDE+ FQELV+CKI K 
Sbjct: 120 KKNLTYKGTNTNKKQKRGDGAS--APSSESGWIMDEFVIVLPKPDEDKFQELVVCKIHKK 177

Query: 630 SNSKDEDDH 656
             SK +  H
Sbjct: 178 KESKKDHQH 186

>gi|297825969|ref|XP_002880867.1| hypothetical protein ARALYDRAFT_901535
        [Arabidopsis lyrata subsp. lyrata]

          Length = 283

 Score =  153 bits (384), Expect = 7e-035
 Identities = 87/190 (45%), Positives = 115/190 (60%), Gaps = 15/190 (7%)
 Frame = +3

Query: 234 MKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNGDN----DGG 401
           MK+VY KEPWLLDH N+  F+++EW+YF TR+Q+S K IGRG+  KR++ GDN    D G
Sbjct:   1 MKDVYAKEPWLLDHPNNSFFKEDEWYYFSTRTQISEKKIGRGKYPKRKITGDNNDGIDRG 60

Query: 402 SWKPNAKKYIEDEETGETIG--KKQTLKFTKSDKKKQKRGDCTSFVVPGSNSSWIMHEYS 575
           +W+ N K+ I DE+TG  IG  K  T K TK++ KKQKRGD  S   PGS S WIM E+ 
Sbjct:  61 NWRINGKENIIDEDTGAIIGIKKNLTYKGTKTN-KKQKRGDGAS--APGSESGWIMDEFV 117

Query: 576 L----PDENTFQELVLCKIRKISNS-KDEDDH-HNVVEDGSIGDLSDKLASTGLDDRQQT 737
           +    PDE+ FQELVLCKI K   S KD+ DH H          +  + +     + +  
Sbjct: 118 IVLPKPDEDKFQELVLCKIHKKKKSKKDKKDHQHEASSSSEQQPIKKRKSKKSKKEHESV 177

Query: 738 LIYAAPPATP 767
           L  ++ P  P
Sbjct: 178 LAASSEPQQP 187

>gi|297796875|ref|XP_002866322.1| hypothetical protein ARALYDRAFT_919155
        [Arabidopsis lyrata subsp. lyrata]

          Length = 282

 Score =  149 bits (376), Expect = 6e-034
 Identities = 78/152 (51%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
 Frame = +3

Query: 234 MKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNGDNDG----G 401
           MK+VY K+PWLLDH N+ LF+++EW+YF TR+Q+S K IGRG+  KR++ GDND     G
Sbjct:   2 MKDVYAKDPWLLDHPNNSLFKEDEWYYFSTRTQISEKKIGRGKYPKRKITGDNDDGIDRG 61

Query: 402 SWKPNAKKYIEDEETGETIGKKQTLKFTKSD-KKKQKRGDCTSFVVPGSNSSWIMHEYSL 578
           +W+ N K+ I DE+TG  IG K+ L +  ++  KKQKRGD  S   PGS S WIM E+ +
Sbjct:  62 NWRINRKENIIDEDTGAIIGIKKNLTYKGTNTNKKQKRGDGAS--SPGSESGWIMDEFVI 119

Query: 579 ----PDENTFQELVLCKIRKISNSKDEDDHHN 662
               PD++ FQELVLCKI K    KD+ DH +
Sbjct: 120 LLPEPDDDKFQELVLCKIHK-KKKKDKKDHQH 150

>gi|297793443|ref|XP_002864606.1| hypothetical protein ARALYDRAFT_358128
        [Arabidopsis lyrata subsp. lyrata]

          Length = 251

 Score =  89 bits (219), Expect = 1e-015
 Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
 Frame = +3

Query: 177 LETYRKPKSKDKEFEDFIEMKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGR 356
           +  Y KPK + ++  DFI MK+VY KEPWLLDH N+  F+++EW+YF TR+Q+S K IGR
Sbjct:  22 IHKYLKPKLRGEDCGDFILMKDVYAKEPWLLDHPNNSFFKEDEWYYFSTRNQISEKKIGR 81

Query: 357 GRNSKRRVNGDNDGGSWKPNAKKYIEDEET----GETIGKKQTLKFTKSDKKKQKRGD 518
           G N+ ++     DG S   +   +I DE           K Q L   K  KKK+ + D
Sbjct:  82 GTNTNKK-QKRGDGASAPSSESGWIMDEFVIVLPKPDEDKFQELVVCKIHKKKESKKD 138


 Score =  60 bits (143), Expect = 6e-007
 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
 Frame = +3

Query: 411 PNAKKYIEDE----ETGETIGKKQTLKFTKSDKKKQKRGDCTSFVVPGSNSSWIMHEYSL 578
           PN   + EDE     T   I +K+  + T ++ KKQKRGD  S   P S S WIM E+ +
Sbjct:  55 PNNSFFKEDEWYYFSTRNQISEKKIGRGTNTN-KKQKRGDGAS--APSSESGWIMDEFVI 111

Query: 579 ----PDENTFQELVLCKIRKISNSKDEDDH 656
               PDE+ FQELV+CKI K   SK +  H
Sbjct: 112 VLPKPDEDKFQELVVCKIHKKKESKKDHQH 141

>gi|15220245|ref|NP_174823.1| NAC (No Apical Meristem) domain transcriptional
        regulator superfamily protein [Arabidopsis thaliana]

          Length = 171

 Score =  84 bits (207), Expect = 2e-014
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
 Frame = +3

Query: 234 MKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGRGRNSKRRV-NGDNDG---G 401
           MK+VY KEPWLLDH+N P F+++EW+YF  R+Q+S K IG G  SKR++   DNDG   G
Sbjct:   1 MKDVYAKEPWLLDHSNDPFFKEDEWYYFSARTQISEKKIGHGNYSKRKITRDDNDGIDRG 60

Query: 402 SWKPNAKKYIEDEETGETIGKKQTLKFTKSDKK 500
            W+   +K I        + K Q  K +K DKK
Sbjct:  61 KWRWTRRKKI---SLRIVVWKIQKYKKSKKDKK 90

>gi|15238786|ref|NP_197331.1| NAC domain containing protein 88 [Arabidopsis
        thaliana]

          Length = 147

 Score =  70 bits (171), Expect = 4e-010
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
 Frame = +3

Query:  90 ENMFNNDEDGGIY-FNPEDQELIKLHLLPKLETYRKPKSKDKEFEDFIEMKNVYDKEPWL 266
           E  ++ +E+ G + FNP ++ELI  +LLPKL  ++       E  D     N+Y KEPW 
Sbjct:   6 EEFYDEEEELGCFRFNPSEEELILDYLLPKLGFHQPNTIYLLEDRD-----NIYAKEPWR 60

Query: 267 LDHTNHPLFRKNEWFYFVTRSQVSVKN---IGRGRNSKRRVNGDNDGGSWKPNAKKYIED 437
           L+HT + +F  NEWFYFV R+   VK     G  ++   +  G+  G   K N + Y+E 
Sbjct:  61 LNHTENDIFEPNEWFYFVKRTNRKVKGWKATGELKDVVSKKTGEVIGK--KRNLRFYVEG 118

Query: 438 EET 446
           +E+
Sbjct: 119 DES 121

>gi|297807857|ref|XP_002871812.1| hypothetical protein ARALYDRAFT_488703
        [Arabidopsis lyrata subsp. lyrata]

          Length = 143

 Score =  67 bits (162), Expect = 4e-009
 Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
 Frame = +3

Query:  90 ENMFNNDED-GGIYFNPEDQELIKLHLLPKLETYRKPKSKDKEFEDFIEMKNVYDKEPWL 266
           E  ++ +E+  G  FNP ++ELI  +LLPKL  Y+       E +D      +Y K PW 
Sbjct:   5 EEFYDEEEELVGFRFNPSEEELILDYLLPKLGFYQPKTIYLLEDKD-----EIYAKVPWR 59

Query: 267 LDHTNHPLFRKNEWFYFVTRSQVSVKN---IGRGRNSKRRVNGDNDGGSWKPNAKKYIED 437
           L HT + +F  NEWFYFV ++   VK     G  ++   + NG   G   K N   Y+E 
Sbjct:  60 LKHTENGIFEPNEWFYFVKKTNRKVKGWKATGGLKDVLSKKNGKVIGK--KRNRSFYVEG 117

Query: 438 EETGETI 458
           E +G T+
Sbjct: 118 ERSGWTM 124

>gi|297843158|ref|XP_002889460.1| hypothetical protein ARALYDRAFT_311447
        [Arabidopsis lyrata subsp. lyrata]

          Length = 271

 Score =  60 bits (145), Expect = 4e-007
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
 Frame = +3

Query: 207 DKEFEDFIEMKNVYDKEPWLLDHTNHPLFRKNEWFYFV--TRSQVSVKNIGRGRNSKRRV 380
           +++   FI   +VY  EPWLL H N+PLF+  EW+YFV  T+ + SV+    GR      
Sbjct:  27 ERKQSSFITTMDVYMDEPWLLPHVNNPLFKNKEWYYFVQLTKRRSSVQRKVPGR------ 80

Query: 381 NGDNDGGSWKPN-AKKYIED 437
            G ++GG+W+ N  K+ I+D
Sbjct:  81 -GGSEGGTWRSNDGKEEIKD 99

>gi|297848614|ref|XP_002892188.1| hypothetical protein ARALYDRAFT_887556
        [Arabidopsis lyrata subsp. lyrata]

          Length = 357

 Score =  60 bits (145), Expect = 4e-007
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
 Frame = +3

Query: 207 DKEFEDFIEMKNVYDKEPWLLDHTNHPLFRKNEWFYFV--TRSQVSVKNIGRGRNSKRRV 380
           +++   FI   +VY  EPWLL H N+PLF+  EW+YFV  T+ + SV+    GR      
Sbjct:  27 ERKQSSFITTMDVYMDEPWLLPHVNNPLFKNKEWYYFVQLTKRRSSVQRKVPGR------ 80

Query: 381 NGDNDGGSWKPN-AKKYIED 437
            G ++GG+W+ N  K+ I+D
Sbjct:  81 -GGSEGGTWRSNDGKEEIKD 99

>gi|7485916|pir||T00909 hypothetical protein F21B7.23 - Arabidopsis thaliana

          Length = 140

 Score =  59 bits (142), Expect = 8e-007
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +3

Query: 207 DKEFEDFIEMKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNG 386
           ++    FI   +++   PWLL H N+PLF  NEW+YFV  ++   K +   R  K    G
Sbjct:  27 ERNQSSFITTMDIHQDYPWLLPHVNNPLFNNNEWYYFVPLTERGGKILSVHR--KVAARG 84

Query: 387 DNDGGSWKPN-AKKYIED 437
            ++GG+W+ N  KK I+D
Sbjct:  85 GSEGGTWRSNDGKKEIKD 102

>gi|145335034|ref|NP_171848.3| NAC domain-containing protein 6 [Arabidopsis
        thaliana]

          Length = 281

 Score =  59 bits (142), Expect = 8e-007
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +3

Query: 207 DKEFEDFIEMKNVYDKEPWLLDHTNHPLFRKNEWFYFVTRSQVSVKNIGRGRNSKRRVNG 386
           ++    FI   +++   PWLL H N+PLF  NEW+YFV  ++   K +   R  K    G
Sbjct:  27 ERNQSSFITTMDIHQDYPWLLPHVNNPLFNNNEWYYFVPLTERGGKILSVHR--KVAARG 84

Query: 387 DNDGGSWKPN-AKKYIED 437
            ++GG+W+ N  KK I+D
Sbjct:  85 GSEGGTWRSNDGKKEIKD 102

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,100,172,876,348
Number of Sequences: 15229318
Number of Extensions: 4100172876348
Number of Successful Extensions: 984362955
Number of sequences better than 0.0: 0