BLASTX 7.6.2
Query= UN36788 /QuerySize=911
(910 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39240.1 | Symbols: | kelch repeat-containing... 150 2e-036
TAIR9_protein||AT4G38940.1 | Symbols: | kelch repeat-containing... 129 4e-030
TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing... 122 5e-028
TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing... 117 9e-027
TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing... 117 9e-027
TAIR9_protein||AT3G43710.1 | Symbols: | kelch repeat-containing... 116 3e-026
TAIR9_protein||AT3G08810.1 | Symbols: | kelch repeat-containing... 108 5e-024
TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing... 107 1e-023
TAIR9_protein||AT3G10510.1 | Symbols: | kelch repeat-containing... 107 2e-023
TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular... 104 8e-023
TAIR9_protein||AT3G06570.1 | Symbols: | kelch repeat-containing... 100 1e-021
TAIR9_protein||AT5G48990.1 | Symbols: | kelch repeat-containing... 97 1e-020
TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular... 83 2e-016
TAIR9_protein||AT4G39590.1 | Symbols: | kelch repeat-containing... 75 4e-014
TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing... 75 7e-014
TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing... 74 1e-013
TAIR9_protein||AT4G19865.1 | Symbols: | kelch repeat-containing... 73 3e-013
TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing... 72 3e-013
TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein | ... 72 6e-013
TAIR9_protein||AT5G38670.1 | Symbols: | F-box family protein | ... 70 1e-012
>TAIR9_protein||AT4G39240.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18269599-18270726 REVERSE
Length = 376
Score = 150 bits (377), Expect = 2e-036
Identities = 103/271 (38%), Positives = 147/271 (54%), Gaps = 13/271 (4%)
Frame = +2
Query: 98 SQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLY 277
S SS ++ LP++++++ LAR+P+ YP +SLVSK FR L++SPEIY RS L TE LY
Sbjct: 29 SCSSYLLLLPDEIILNCLARLPKCYYPVISLVSKTFRRLIASPEIYVERSLLRRTERVLY 88
Query: 278 VVLFDWDDRVNRLYTLRREEKEKDKGS-RLVLIPGLPDMPRDG-SYVAVGSRIYVFCG-- 445
VVL R YTL + D + RLV IP P +P G S VA+ S IYV G
Sbjct: 89 VVLRSHATETPRWYTLNFKPFGNDSNNHRLVPIPSFPSIPCWGMSIVAIDSEIYVLGGCI 148
Query: 446 --SMTSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFGYLDGTMEMLV--FDT 613
+ S+ F ++C SHT + LP M G+++V G + V FD
Sbjct: 149 DNELVSTGFVVEC-PSHTCRLLPSMKQARGCAAVGFFDGKLYVIGGCNPLSVNWVEAFDL 207
Query: 614 ETQTWEGPMTVPGMKIHDAFLVVMA--GKMYMKNFWNSFVYDPKEIKWETDEVLGSKYWG 787
+TQTWE + V +++HD + A K+Y+ + NSFVYDPKE ETDE+L ++ W
Sbjct: 208 KTQTWESGLGVNNVEMHDLTIRSFAIDDKIYIMDRKNSFVYDPKEGTLETDELLDTQ-WS 266
Query: 788 EKACVVDDVLYYHSWFDKELRAYDPQHKCWE 880
+CV+D +Y + +DP W+
Sbjct: 267 VGSCVIDGKIYTFG-SKNRIWVFDPIAMVWD 296
>TAIR9_protein||AT4G38940.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18152848-18153960 FORWARD
Length = 371
Score = 129 bits (322), Expect = 4e-030
Identities = 78/167 (46%), Positives = 103/167 (61%), Gaps = 11/167 (6%)
Frame = +2
Query: 113 IMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVVLF- 289
I LPE++VVDI+ARVPR YP +S VS+ FRSLV+SPEIY+RRS GCTE CLY+ +
Sbjct: 21 ISLLPEEIVVDIVARVPRCYYPTLSQVSRRFRSLVASPEIYKRRSFFGCTEQCLYIAISK 80
Query: 290 DWDDRVNRLYTLRREEKEKDKGS-----RLVLIPGLPDMPRDGSYVAVGSRIYV---FCG 445
D ++ R+ ++ G+ RLV IP LP MP GSYV +GS I+V FC
Sbjct: 81 DQTSDIHWFTLCRKPNGQQFSGTTASDHRLVHIPTLPPMPMHGSYVGIGSNIFVMGGFCN 140
Query: 446 -SMTSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFGYLD 583
+TSS IDC +HT Q LP MP ++ V ++ +I+V G D
Sbjct: 141 WKITSSVSLIDC-RTHTAQTLPNMPKAVAFPVTELIDRKIYVIGGSD 186
>TAIR9_protein||AT1G19930.1 | Symbols: | kelch repeat-containing F-box family
protein | chr1:6917020-6918138 FORWARD
Length = 345
Score = 122 bits (304), Expect = 5e-028
Identities = 94/276 (34%), Positives = 142/276 (51%), Gaps = 39/276 (14%)
Frame = +2
Query: 113 IMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYV-VLF 289
I SLP D++V+ILARV R DYP +SLVSK F S+++ PE+Y+ RS +G TE+CLYV +L
Sbjct: 11 IFSLPNDLLVNILARVSRLDYPILSLVSKRFSSVLTLPELYQTRSLVGLTENCLYVCLLS 70
Query: 290 DWDDRVNRLYTLRR-----EEKEKDKGSRLVLIPGLPDMP--RDGSYVAVGSRIYVFCGS 448
DR+ + L R + K G L IP +P P S VAVGS IY GS
Sbjct: 71 SRADRIPSWFKLCRRPILASDTRKSSGYVLATIP-IPHSPPLHRSSLVAVGSNIYNIGGS 129
Query: 449 M----TSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFGYLDGTMEMLVFDTE 616
+ +SS +DC SHT P M V A + G+I+V G T T+
Sbjct: 130 ISQSQSSSVSILDC-WSHTWLEGPSMQVEREYPSASLLDGKIYVTGGCRLTFHGCGDQTD 188
Query: 617 TQTWEGPMTVPGMKIHDAFLVVMAGKMYMKNFWNSFVYDPKEIKWE---TDEVLGSKYWG 787
VV+ GK++ + Y+P + +W+ ++ LG K+
Sbjct: 189 N-------------------VVVDGKLHSCGGYKGVAYNPNDGRWDSLGSEMNLGLKW-- 227
Query: 788 EKACVVDDVLYYHSWFDKELRAYDPQHKCWELMNGL 895
+CV+++V+YY+ + ++ ++ YD + + W +NGL
Sbjct: 228 SSSCVIENVIYYY-YHNENIKWYDTKVRSWRTLNGL 262
>TAIR9_protein||AT4G39560.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 117 bits (293), Expect = 9e-027
Identities = 81/183 (44%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Frame = +2
Query: 104 SSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVV 283
S+ I+SLP D+++ ILARV R DYP +SLVSK FRSL++SPE+YE RS LG TE CLY+
Sbjct: 24 STQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLIASPELYETRSLLGRTESCLYLC 83
Query: 284 LFDWDDRVNRLYTLRREEKEKDKGSRLVLIPGLPDMPRDGSYVAVGSRIYVFCGSM---- 451
L D R +TL R+ K + IP + G VAVGS IY GS+
Sbjct: 84 LGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVHCSG-LVAVGSDIYNIGGSIINEH 142
Query: 452 TSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG---YLDGTMEMLVFDTETQ 622
+SS +DC HT + P M V + A+V G+I+V G + + M VFD +TQ
Sbjct: 143 SSSVSILDC-RYHTWRDAPNMLVERNSHAANVIDGKIYVAGGSRDSNSSNWMEVFDIKTQ 201
Query: 623 TWE 631
TWE
Sbjct: 202 TWE 204
>TAIR9_protein||AT4G39560.2 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18382940-18383740 REVERSE
Length = 267
Score = 117 bits (293), Expect = 9e-027
Identities = 81/183 (44%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Frame = +2
Query: 104 SSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVV 283
S+ I+SLP D+++ ILARV R DYP +SLVSK FRSL++SPE+YE RS LG TE CLY+
Sbjct: 24 STQILSLPVDLLISILARVSRLDYPILSLVSKSFRSLIASPELYETRSLLGRTESCLYLC 83
Query: 284 LFDWDDRVNRLYTLRREEKEKDKGSRLVLIPGLPDMPRDGSYVAVGSRIYVFCGSM---- 451
L D R +TL R+ K + IP + G VAVGS IY GS+
Sbjct: 84 LGIPSDFNPRWFTLCRKPKPSGHVMAAISIPNSRPVHCSG-LVAVGSDIYNIGGSIINEH 142
Query: 452 TSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG---YLDGTMEMLVFDTETQ 622
+SS +DC HT + P M V + A+V G+I+V G + + M VFD +TQ
Sbjct: 143 SSSVSILDC-RYHTWRDAPNMLVERNSHAANVIDGKIYVAGGSRDSNSSNWMEVFDIKTQ 201
Query: 623 TWE 631
TWE
Sbjct: 202 TWE 204
>TAIR9_protein||AT3G43710.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:15605608-15606744 FORWARD
Length = 379
Score = 116 bits (288), Expect = 3e-026
Identities = 99/282 (35%), Positives = 143/282 (50%), Gaps = 28/282 (9%)
Frame = +2
Query: 86 ENYQSQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTE 265
E +S + I LP+D+V+ LARVPR YP +SLVSK FRS ++S E+Y+ R+ LG TE
Sbjct: 17 EERRSMTFGIEMLPDDLVLSCLARVPRMYYPILSLVSKRFRSFLTSTELYQTRNLLGSTE 76
Query: 266 HCLYVVL-FDWDDRVNRLYTLRREEKEKDKGSRLVLIPG-----LPDMPRDGSYVAVGSR 427
L+V L D RL+TL R K +L P LPD+ V VGS
Sbjct: 77 SFLFVCLRIVNDSNPLRLFTLCRRPNSLTKVMVPILSPDSIPKFLPDV------VLVGSN 130
Query: 428 IYVFCGSMTSSA----FFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG---YLDG 586
IYV G + ++A +DC SHT + V A V G+I+V G LD
Sbjct: 131 IYVIGGLINNNASHKVMVMDC-RSHTWREAQGTCVARVSPSACVLDGKIYVAGGCKNLDA 189
Query: 587 TMEMLVFDTETQTWEGPMTVPGMKI----HDAFLVVMAGKMYMKNFWNSFVYDPKEIKWE 754
TM M VFDT+T++WE ++ PG +I + G +Y+++ +Y+ + +W
Sbjct: 190 TMWMEVFDTKTESWEF-VSSPGEEICRDLTSCESIGYDGNVYVESMKTYGLYELHKGRWR 248
Query: 755 TDEVLGSKYWG-EKACVVDDVLYYHSWFDKELRAYDPQHKCW 877
+ S+ CV+D+VL Y SW + YD ++K W
Sbjct: 249 EGQYSMSRGGSLSSQCVIDNVL-YRSW-SYMVEWYDSENKLW 288
>TAIR9_protein||AT3G08810.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:2675631-2676662 REVERSE
Length = 344
Score = 108 bits (269), Expect = 5e-024
Identities = 75/199 (37%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Frame = +2
Query: 80 WPENYQSQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGC 259
W + + +Q+ S SLP+DV++ I ARV R YP +S VS+ FRSL++SPE+Y+ RS G
Sbjct: 13 WSKPHSTQNPS-PSLPDDVLLSIFARVSRLYYPTLSHVSESFRSLLASPELYKARSLSGN 71
Query: 260 TEHCLYVVL-----FDWDDRVNRLYTLRREEKEKDKGSRL--VLIPGLPDMPRDGSYVAV 418
TE CLYV L + W + E+ K G L V IPG R S VAV
Sbjct: 72 TEICLYVCLRCSTGYRWFSLSRKPDQTLTYEERKSSGYALARVPIPGGSPNVRSSSLVAV 131
Query: 419 GSRIYVFCGSM-----TSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFGYLD 583
GS IY CGS+ +SS +DC SHT + P +PV +S + A V G GY D
Sbjct: 132 GSDIYNICGSINKASSSSSVSILDC-QSHTWREAPSLPVELSSISASVRDGNQGGHGYSD 190
Query: 584 ---GTMEMLVFDTETQTWE 631
+ ++ ++++ W+
Sbjct: 191 SRKNSFKVFAYNSKEGRWD 209
>TAIR9_protein||AT4G39600.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18389436-18390539 REVERSE
Length = 368
Score = 107 bits (266), Expect = 1e-023
Identities = 78/192 (40%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Frame = +2
Query: 104 SSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVV 283
++S SLPED+VV LARV R YP +SLVSK FRSL++SP++Y+ RS LG TE CLY+
Sbjct: 11 ATSNPSLPEDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKTRSLLGRTESCLYLC 70
Query: 284 LFDWDDRVNRLYTLRR--------EEKEKDKGSRLVLIPGLPDMPRD-GSYVAVGSRIYV 436
L + R +TL R +EK + G+ LV IP + P + S VAVGS +Y
Sbjct: 71 LRYSPEDNPRWFTLCRKPNRRTLSKEKNESSGNLLVPIPIINSPPLEWSSIVAVGSHLYA 130
Query: 437 FCGSM----TSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG---YLDGTME 595
G + S+ F+DC SHT P M V + D G++++ G +D
Sbjct: 131 INGPIEDAPCSNVSFLDC-RSHTWLEAPSMRVAHTNSQLD---GKMYLAGSSENVDSLNC 186
Query: 596 MLVFDTETQTWE 631
+ VF T+TQTW+
Sbjct: 187 IQVFSTKTQTWK 198
>TAIR9_protein||AT3G10510.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:3274220-3275551 REVERSE
Length = 372
Score = 107 bits (265), Expect = 2e-023
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Frame = +2
Query: 86 ENYQSQSSSIMSLPEDVVVDILA-RVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCT 262
E ++ S + S+P+DV+++ +A RVPR ++ +SLVSK FRSLV+SP +Y+ RS LGCT
Sbjct: 6 EKEKTPPSVMTSIPDDVIMECIAPRVPRYNHSMLSLVSKQFRSLVASPRLYKTRSLLGCT 65
Query: 263 EHCLYVVLFDWDDRVNRLYTLRREEKEKDKG---SRLVLIPGLPDMPRDGSYVAVGSRIY 433
E C+YV++ D V R Y+L R K G +RLVLI LP MP SYV VGS I+
Sbjct: 66 EDCVYVLIEDCILEVARWYSLNRRTKRNMPGTVENRLVLISSLPPMPTAASYVVVGSNIF 125
Query: 434 VFCG 445
V G
Sbjct: 126 VMGG 129
>TAIR9_protein||AT5G39560.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot, cauline leaf,
stamen, leaf; EXPRESSED DURING: LP.04 four leaves visible, petal
differentiation and expansion stage, LP.08 eight leaves visible;
CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810),
Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch
repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis
thaliana protein match is: kelch repeat-containing F-box family protein
(TAIR:AT4G19870.2); Has 2231 Blast hits to 1863 proteins in 132
species: Archae - 8; Bacteria - 107; Metazoa - 1341; Fungi - 6; Plants
- 633; Viruses - 27; Other Eukaryotes - 109 (source: NCBI BLink). |
chr5:15841885-15843096 REVERSE
Length = 404
Score = 104 bits (259), Expect = 8e-023
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 11/187 (5%)
Frame = +2
Query: 98 SQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLY 277
S+ S+MSLP +++ +ILAR+ + YP +SLVSK F SL+SSP++Y+ RS +G TE CLY
Sbjct: 24 SEPPSLMSLPYEIIENILARISKWSYPNLSLVSKSFLSLLSSPQLYKTRSEIGTTEPCLY 83
Query: 278 VVLFDWDDRVNRLYTLRREEKEKDKGSRLVLIPGLPDMPRDG-----SYVAVGSRIYVFC 442
L + + YTL + E G+ + L +P S VAVGS IYV
Sbjct: 84 FCLESANHSSPQWYTLWMKPDETLTGTGTIHDYSLIPLPSSSPVLRTSTVAVGSEIYVIG 143
Query: 443 G--SMTSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG--YLDGTMEML-VF 607
G + +SS DC S+T + P M V S+ VA + RI+V G +D + + VF
Sbjct: 144 GHFNRSSSVRIFDC-RSNTWRDGPNMTVARSDPVAVLIDQRIYVLGGREMDESDDWFEVF 202
Query: 608 DTETQTW 628
D +TQTW
Sbjct: 203 DIKTQTW 209
>TAIR9_protein||AT3G06570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr3:2047369-2048541 REVERSE
Length = 391
Score = 100 bits (248), Expect = 1e-021
Identities = 71/172 (41%), Positives = 94/172 (54%), Gaps = 14/172 (8%)
Frame = +2
Query: 95 QSQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCL 274
QS S+S SLP+D+++ I+ARVPR + VSLV K FRSL+ SPE+Y+ RS G TE CL
Sbjct: 20 QSASASFQSLPDDLILSIVARVPRLYHRTVSLVCKSFRSLLVSPELYKARSVSGHTESCL 79
Query: 275 YVVLFDWDDRVNRLYTLRR-----------EEKEKDKGSRLVLIPGLPDMP-RDGSYVAV 418
Y+ + + D R++TL R EEK+K G L +P P S V V
Sbjct: 80 YLSIACYPD--YRMFTLCRKPDQTLTTSEEEEKKKSNGYYLAPVPDPDSHPVYFSSLVTV 137
Query: 419 GSRIYVFCGSMTSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFG 574
GS IY GS SS I S+T + PR+ V ++ V A V +I V G
Sbjct: 138 GSDIYNIAGSHASSNVSILDCRSNTWREAPRLGVELTSVSASVLDRKIFVVG 189
>TAIR9_protein||AT5G48990.1 | Symbols: | kelch repeat-containing F-box family
protein | chr5:19862340-19863458 FORWARD
Length = 373
Score = 97 bits (240), Expect = 1e-020
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 51/284 (17%)
Frame = +2
Query: 101 QSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYV 280
+SS SLPED++V ILARV R Y +S+VSK FRS+++SPE+Y+ R+ LG E LYV
Sbjct: 13 KSSPNPSLPEDLIVSILARVSRSYYTNLSVVSKTFRSILTSPELYKTRTLLGKPETFLYV 72
Query: 281 VLFDWDDRVNR---LY-----TLRREEKEKDKGSRLVLIPGLPDMPRD----GSYVAVGS 424
L D+ R LY TL +++K+K+ S +L P +P + S VAVGS
Sbjct: 73 CLRFPDEANPRWLILYRKPNQTLTKKKKKKEDSSVHLLAP-IPILNSPTVEWSSLVAVGS 131
Query: 425 RIYVFCG----SMTSSAFFIDCASSHTVQHLPRMPVPMSEVVADVNGGRIHVFGYLDGTM 592
+Y S S+ +++DC +HT PR+ ++ + +D NG Y G+
Sbjct: 132 YLYAITADIKDSPCSNVWYLDC-RTHTWLDSPRL--RLAHINSDFNGRT-----YFPGSS 183
Query: 593 E-------MLVFDTETQTWEGPMTVPGMKIHDAFLVVMAGKMYM----KNFWNSFVYDPK 739
E + V++T TQTW VP K F M GK+Y+ +N + +PK
Sbjct: 184 EKPDSLNCVEVYNTNTQTWN---PVPPQKRKLKF-GNMEGKIYIPPCQENHRKAVALNPK 239
Query: 740 EIKWETDEVLGSKYWGEKACVVDDVLYYHSWFDKELRAYDPQHK 871
+ WE LG+ C++ ++ Y YDP K
Sbjct: 240 VLTWEA-VGLGTNLDRGSFCMIGNIAY----------CYDPSGK 272
>TAIR9_protein||AT5G49000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing F-box family protein
(TAIR:AT4G39550.1); Has 5235 Blast hits to 3308 proteins in 165
species: Archae - 10; Bacteria - 167; Metazoa - 4114; Fungi - 13;
Plants - 659; Viruses - 110; Other Eukaryotes - 162 (source: NCBI
BLink). | chr5:19864527-19865645 FORWARD
Length = 373
Score = 83 bits (203), Expect = 2e-016
Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Frame = +2
Query: 101 QSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYV 280
+S+ SLP+D++V ILARV R YP +SLVSK R+LV+SPE+Y+ RS TE CLYV
Sbjct: 18 ESTPNPSLPDDLIVSILARVSRLYYPILSLVSKSSRTLVTSPELYKTRSFFNRTESCLYV 77
Query: 281 VLFDWDDRVNRLYTLRREEK----EKDKGSRLVLIPGLPD-MPRDGSYVAVGSRIYVFCG 445
L D R +TL R+ EK K S ++ +P+ S VA+GS IY G
Sbjct: 78 CLDFPPDPNPRWFTLYRKPNQNITEKTKNSSGFVLAPIPNHHSHSSSIVAIGSNIYAIGG 137
Query: 446 SMTSS 460
S+ ++
Sbjct: 138 SIENA 142
>TAIR9_protein||AT4G39590.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18387515-18388723 REVERSE
Length = 403
Score = 75 bits (184), Expect = 4e-014
Identities = 50/125 (40%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Frame = +2
Query: 83 PENYQSQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCT 262
P + +SI SLP D++++ ARV R YP +S VSK FRS+V+SPEIY RS L T
Sbjct: 28 PSPVTREPTSIDSLPNDLLLNCFARVSRMYYPALSRVSKRFRSIVTSPEIYNTRSLLNRT 87
Query: 263 EHCLYVVLFDWDDRVNRLYTLRREEKEKDKGSRLVLIPGLPDMP--RDGSYVAVGSRIYV 436
E CLY+ L D +TL + + IP P P + VAVGS IY
Sbjct: 88 EKCLYLCLRFPFDNNTHWFTLYQNPNRTVSDKVFLQIPS-PQYPLTLSSNLVAVGSNIYR 146
Query: 437 FCGSM 451
G++
Sbjct: 147 IGGTV 151
>TAIR9_protein||AT4G39550.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18380681-18381859 REVERSE
Length = 393
Score = 75 bits (182), Expect = 7e-014
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 SLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVVLFDWD 298
SLP+D+VV LARV R YP +SLVSK FRSL++SP++Y+ RS LG TE CLYV L + D
Sbjct: 26 SLPDDLVVSCLARVSRLYYPTLSLVSKSFRSLIASPDLYKTRSLLGRTESCLYVCLQEKD 85
Query: 299 DRVN-RLYTL 325
N R +TL
Sbjct: 86 SDPNPRWFTL 95
>TAIR9_protein||AT4G39580.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18385684-18386811 REVERSE
Length = 376
Score = 74 bits (179), Expect = 1e-013
Identities = 51/118 (43%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Frame = +2
Query: 122 LPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVVLFDWDD 301
LP+D+++ L+R+ R YP SLVSK FRSL++SPE+Y+ RS LG TE CLYV L +D
Sbjct: 26 LPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQTRSILGRTESCLYVSLRLLND 85
Query: 302 RVNRLYTLRREEKEK----DKGSRLVLIPGLPDMPRD-GSYVAVGSRIYVFCGSMTSS 460
R YTL R K G LV I P S VAV IY G + +
Sbjct: 86 SNLRWYTLCRVPDRKLTNFSGGHLLVPILSRYAPPAHWSSVVAVDYNIYAIGGPINDA 143
>TAIR9_protein||AT4G19865.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:10781184-10782365 REVERSE
Length = 394
Score = 73 bits (177), Expect = 3e-013
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2
Query: 98 SQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLY 277
S S S+ LPE++VV LAR+ R YP +SLVSK FRS++SS E+Y RS LG TE C+Y
Sbjct: 25 SSSPSLSLLPEEIVVHCLARISRLYYPTLSLVSKSFRSILSSTELYATRSHLGSTEQCVY 84
Query: 278 VVLFD 292
+ L+D
Sbjct: 85 LCLWD 89
>TAIR9_protein||AT4G39570.1 | Symbols: | kelch repeat-containing F-box family
protein | chr4:18384254-18385441 REVERSE
Length = 396
Score = 72 bits (176), Expect = 3e-013
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +2
Query: 113 IMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVVLFD 292
I SLP+D++V I ARV R YP +SLVSK FRSL+ SPE+YE RS LG TE CLY+ L +
Sbjct: 32 IPSLPDDLLVSIFARVSRLYYPILSLVSKSFRSLLRSPELYETRSLLGRTESCLYLCLQE 91
Query: 293 WDDRVNRLY 319
+ N L+
Sbjct: 92 GNPDPNPLW 100
>TAIR9_protein||AT4G05620.1 | Symbols: | F-box family protein |
chr4:2985051-2985449 REVERSE
Length = 133
Score = 72 bits (174), Expect = 6e-013
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +2
Query: 116 MSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCLYVVLFDW 295
+SLP DV+V LA V R Y +SLV K FRSL++SPE+Y+ RS LG E CLYV L
Sbjct: 21 LSLPHDVLVSCLAHVSRLHYSILSLVLKNFRSLIASPELYKTRSLLGRIESCLYVCLRFP 80
Query: 296 DDRVNRLYTLRREEKE-----KDKGSRLVLIPGLPDMPRDG-SYVAVGSRIY 433
++ R +TL + + K + LV P + P +AVGSRIY
Sbjct: 81 NESHPRWFTLYMKPNQIVANNKSNCNLLVPTPTISSSPAHWLCLIAVGSRIY 132
>TAIR9_protein||AT5G38670.1 | Symbols: | F-box family protein |
chr5:15475786-15476871 FORWARD
Length = 292
Score = 70 bits (171), Expect = 1e-012
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +2
Query: 95 QSQSSSIMSLPEDVVVDILARVPRQDYPRVSLVSKYFRSLVSSPEIYERRSSLGCTEHCL 274
QSQ++ SLP+D+++ +ARV R YP +SLVSK FRSL++SPE+Y+ RS L TE CL
Sbjct: 2 QSQTNPNPSLPDDLILSCVARVSRLYYPALSLVSKSFRSLIASPELYKTRSLLDRTESCL 61
Query: 275 YVV 283
Y++
Sbjct: 62 YIL 64
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,722,494,304
Number of Sequences: 33410
Number of Extensions: 18722494304
Number of Successful Extensions: 599467784
Number of sequences better than 0.0: 0
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