BLASTX 7.6.2
Query= UN36819 /QuerySize=998
(997 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54385.1 | Symbols: | binding | chr1:20301289... 302 4e-082
TAIR9_protein||AT1G54385.2 | Symbols: | binding | chr1:20301289... 302 4e-082
>TAIR9_protein||AT1G54385.1 | Symbols: | binding | chr1:20301289-20303048
REVERSE
Length = 561
Score = 302 bits (771), Expect = 4e-082
Identities = 182/274 (66%), Positives = 204/274 (74%), Gaps = 37/274 (13%)
Frame = +1
Query: 19 CRSVTGSNFSRRKCSPHSPDESLSPESRTLGGSFSGYDSPLESSP--RSSCN--FDGRSV 186
CRSVTGSNFSRR CS PD SLSPES+TL GSFSGYDSP+ESSP +SCN FD RSV
Sbjct: 304 CRSVTGSNFSRRNCSSIVPDYSLSPESQTL-GSFSGYDSPVESSPISHTSCNSEFDRRSV 362
Query: 187 NRKLWR---TNGAVDISLKDGLFS----GDTTVSDSPLVPYDHCDNGGDEFEGFVMGSLR 345
NRKLWR G VDISLKDGLFS G TTVSDSPLVPYD C+N GDEFEGF+M SLR
Sbjct: 363 NRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDSPLVPYDTCEN-GDEFEGFLMESLR 421
Query: 346 NRRVQNSTPTSPQRQCRSRNMNAEDFNIYSTPRKLISSLQYPDDMGLDHSDIQSP----- 510
N T SPQRQ RSR +NAEDFNI+STPRKLISSLQYPDD+ LDHSDIQSP
Sbjct: 422 N------TTPSPQRQ-RSRRINAEDFNIFSTPRKLISSLQYPDDVDLDHSDIQSPILRGE 474
Query: 511 ----MPSRQKTKLRKQAPTVAEVETISSSSTVIYHREETTPQSQLLMSSKKKKKNMSYGK 678
+ SR+ KLRKQ PT+ VET+SS+ TV E T Q+Q++ + KKKKK MSY K
Sbjct: 475 REKTIGSRKNPKLRKQFPTM--VETMSSTITV----SEDTAQTQMI-TGKKKKKKMSYAK 527
Query: 679 LMFAISFFVVVLF-TSLMMLNQDDDVGYHTVPT* 777
L+ AISF VV LF T ++M+NQDDDVGY+TVPT*
Sbjct: 528 LVIAISFVVVALFATVILMVNQDDDVGYYTVPT* 561
>TAIR9_protein||AT1G54385.2 | Symbols: | binding | chr1:20301289-20303048
REVERSE
Length = 561
Score = 302 bits (771), Expect = 4e-082
Identities = 182/274 (66%), Positives = 204/274 (74%), Gaps = 37/274 (13%)
Frame = +1
Query: 19 CRSVTGSNFSRRKCSPHSPDESLSPESRTLGGSFSGYDSPLESSP--RSSCN--FDGRSV 186
CRSVTGSNFSRR CS PD SLSPES+TL GSFSGYDSP+ESSP +SCN FD RSV
Sbjct: 304 CRSVTGSNFSRRNCSSIVPDYSLSPESQTL-GSFSGYDSPVESSPISHTSCNSEFDRRSV 362
Query: 187 NRKLWR---TNGAVDISLKDGLFS----GDTTVSDSPLVPYDHCDNGGDEFEGFVMGSLR 345
NRKLWR G VDISLKDGLFS G TTVSDSPLVPYD C+N GDEFEGF+M SLR
Sbjct: 363 NRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDSPLVPYDTCEN-GDEFEGFLMESLR 421
Query: 346 NRRVQNSTPTSPQRQCRSRNMNAEDFNIYSTPRKLISSLQYPDDMGLDHSDIQSP----- 510
N T SPQRQ RSR +NAEDFNI+STPRKLISSLQYPDD+ LDHSDIQSP
Sbjct: 422 N------TTPSPQRQ-RSRRINAEDFNIFSTPRKLISSLQYPDDVDLDHSDIQSPILRGE 474
Query: 511 ----MPSRQKTKLRKQAPTVAEVETISSSSTVIYHREETTPQSQLLMSSKKKKKNMSYGK 678
+ SR+ KLRKQ PT+ VET+SS+ TV E T Q+Q++ + KKKKK MSY K
Sbjct: 475 REKTIGSRKNPKLRKQFPTM--VETMSSTITV----SEDTAQTQMI-TGKKKKKKMSYAK 527
Query: 679 LMFAISFFVVVLF-TSLMMLNQDDDVGYHTVPT* 777
L+ AISF VV LF T ++M+NQDDDVGY+TVPT*
Sbjct: 528 LVIAISFVVVALFATVILMVNQDDDVGYYTVPT* 561
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,722,494,304
Number of Sequences: 33410
Number of Extensions: 18722494304
Number of Successful Extensions: 599467784
Number of sequences better than 0.0: 0
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