BLASTX 7.6.2
Query= UN36822 /QuerySize=970
(969 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1; ... 212 3e-055
TAIR9_protein||AT1G04020.1 | Symbols: ATBARD1, BARD1 | BARD1 (BR... 94 1e-019
TAIR9_protein||AT1G04020.2 | Symbols: ATBARD1, BARD1 | BARD1 (BR... 94 2e-019
TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type... 51 1e-006
TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type... 51 1e-006
TAIR9_protein||AT1G68070.1 | Symbols: | zinc finger (C3HC4-type... 50 3e-006
>TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1;
ubiquitin-protein ligase | chr4:11248174-11252633 FORWARD
Length = 942
Score = 212 bits (539), Expect = 3e-055
Identities = 108/166 (65%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Frame = +1
Query: 106 SHLEKMGRELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCKIPFHRREIRG 285
SHLE+MGRELKCPICLSL+NSAVSL+CNHVFCNACIVKSMK+DATCPVCKIP+HRREIRG
Sbjct: 5 SHLERMGRELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRREIRG 64
Query: 286 APHMDSLVSIYKNMEVSSGVHLFVTQKTKLSSPPEKEKHVGDASTEKENRKKRQGSSKGP 465
APHMDSLVSIYKNME +SG+ LFV+Q SP +KEK V DAS EK + K RQGS KG
Sbjct: 65 APHMDSLVSIYKNMEDASGIKLFVSQNN--PSPSDKEKQVRDASVEKASDKNRQGSRKGR 122
Query: 466 TSKRRGSKNPKETDADSSGQRERDQSTLANLRLAVLFSL*MDSISK 603
SKR KE D D+ G S+ R+ +L +L +S++K
Sbjct: 123 ASKRNEYGKTKEIDVDAPGPIVMKPSSQTKKRVQLLQNLSAESLTK 168
>TAIR9_protein||AT1G04020.1 | Symbols: ATBARD1, BARD1 | BARD1 (BREAST CANCER
ASSOCIATED RING 1); DNA binding / transcription coactivator |
chr1:1036610-1040045 FORWARD
Length = 715
Score = 94 bits (232), Expect = 1e-019
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Frame = +1
Query: 109 HLEKMGRELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCKIPFHRREIRGA 288
HL+K+ ELKCP+CL L N V L C+HVFC++C+ KS +V++ CPVCK ++ R
Sbjct: 15 HLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHPKKARRDL 74
Query: 289 PHMDSLVSIYKNMEVSSGVHLFVTQ-------KTKLSSPPEKEKHVGDASTEKENRKKRQ 447
M+S++SIYK++ + VHL Q K + KH +E ++ +
Sbjct: 75 RFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKNDALNNSNSPKHGESEDSEMTDKDVSK 134
Query: 448 GSSKGPTSKRRGSKNPKETDAD 513
S +S R GS P ++D
Sbjct: 135 RSGGTDSSSRDGSPLPTSEESD 156
>TAIR9_protein||AT1G04020.2 | Symbols: ATBARD1, BARD1 | BARD1 (BREAST CANCER
ASSOCIATED RING 1); DNA binding / transcription coactivator |
chr1:1036610-1040045 FORWARD
Length = 714
Score = 94 bits (231), Expect = 2e-019
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Frame = +1
Query: 109 HLEKMGRELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCKIPFHRREIRGA 288
HL+K+ ELKCP+CL L N V L C+HVFC++C+ KS +V++ CPVCK ++ R
Sbjct: 15 HLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHPKKGKRDL 74
Query: 289 PHMDSLVSIYKNMEVSSGVHLFVTQ-------KTKLSSPPEKEKHVGDASTEKENRKKRQ 447
M+S++SIYK++ + VHL Q K + KH +E ++ +
Sbjct: 75 RFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKNDALNNSNSPKHGESEDSEMTDKDVSK 134
Query: 448 GSSKGPTSKRRGSKNPKETDAD 513
S +S R GS P ++D
Sbjct: 135 RSGGTDSSSRDGSPLPTSEESD 156
>TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 51 bits (120), Expect = 1e-006
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 ELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCK 255
+ CPICL F VS C H+FC CI ++ + A CP C+
Sbjct: 124 KFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCR 165
>TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 51 bits (120), Expect = 1e-006
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 130 ELKCPICLSLFNSAVSLTCNHVFCNACIVKSMKVDATCPVCK 255
+ CPICL F VS C H+FC CI ++ + A CP C+
Sbjct: 124 KFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCR 165
>TAIR9_protein||AT1G68070.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:25515412-25516767 REVERSE
Length = 344
Score = 50 bits (117), Expect = 3e-006
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +1
Query: 139 CPICLSLFNSA---VSLTCNHVFCNACIVKSMKVDATCPVCK 255
C ICLS + VSL CNH F + CIVK +K++ATCP+CK
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCK 333
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,722,494,304
Number of Sequences: 33410
Number of Extensions: 18722494304
Number of Successful Extensions: 599467784
Number of sequences better than 0.0: 0
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