BLASTX 7.6.2
Query= UN36848 /QuerySize=977
(976 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G11970.1 | Symbols: | YT521-B-like family pro... 163 2e-040
TAIR9_protein||AT4G11970.2 | Symbols: | YT521-B-like family pro... 163 2e-040
TAIR9_protein||AT1G30460.1 | Symbols: CPSF30, ATCPSF30 | CPSF30;... 58 7e-009
>TAIR9_protein||AT4G11970.1 | Symbols: | YT521-B-like family protein |
chr4:7181223-7182953 FORWARD
Length = 445
Score = 163 bits (412), Expect = 2e-040
Identities = 88/124 (70%), Positives = 100/124 (80%), Gaps = 12/124 (9%)
Frame = +3
Query: 156 MSSDTTAK-----DSSLTDWKQDIGHSDDPD---YRSKEDRKPSS-NVERGQF---LESW 299
MSSDT + DSSLTDWKQD+G+SDDP+ YRSKED K S +V+R F LES
Sbjct: 1 MSSDTAKENASVVDSSLTDWKQDLGNSDDPESTSYRSKEDHKLSKVDVDRRNFPDQLESA 60
Query: 300 NESKKSKPGYQTRYFIIKSLNYDNIQLSLERGIWATQVMNEPILEGAFHNSGRVVLIFSV 479
+K SKPGY+TRYFIIKSLNYDNIQ+S+E+GIWATQVMNEPILEGAFH SGRV+LIFSV
Sbjct: 61 KANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGRVILIFSV 120
Query: 480 NMSG 491
NMSG
Sbjct: 121 NMSG 124
Score = 59 bits (141), Expect = 4e-009
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +1
Query: 520 EQEKYLRFNSWGLPLESPLASTLTDDDFLNMVIPQSRVT 636
EQ+K LRFNSW LPLESPLA++LTDDDFL MV+ VT
Sbjct: 296 EQDKSLRFNSWCLPLESPLANSLTDDDFLEMVVAYLLVT 334
>TAIR9_protein||AT4G11970.2 | Symbols: | YT521-B-like family protein |
chr4:7181223-7183265 FORWARD
Length = 360
Score = 163 bits (412), Expect = 2e-040
Identities = 88/124 (70%), Positives = 100/124 (80%), Gaps = 12/124 (9%)
Frame = +3
Query: 156 MSSDTTAK-----DSSLTDWKQDIGHSDDPD---YRSKEDRKPSS-NVERGQF---LESW 299
MSSDT + DSSLTDWKQD+G+SDDP+ YRSKED K S +V+R F LES
Sbjct: 1 MSSDTAKENASVVDSSLTDWKQDLGNSDDPESTSYRSKEDHKLSKVDVDRRNFPDQLESA 60
Query: 300 NESKKSKPGYQTRYFIIKSLNYDNIQLSLERGIWATQVMNEPILEGAFHNSGRVVLIFSV 479
+K SKPGY+TRYFIIKSLNYDNIQ+S+E+GIWATQVMNEPILEGAFH SGRV+LIFSV
Sbjct: 61 KANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGRVILIFSV 120
Query: 480 NMSG 491
NMSG
Sbjct: 121 NMSG 124
Score = 55 bits (131), Expect = 6e-008
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 520 EQEKYLRFNSWGLPLESPLASTLTDDDFLNM 612
EQ+K LRFNSW LPLESPLA++LTDDDFL M
Sbjct: 296 EQDKSLRFNSWCLPLESPLANSLTDDDFLEM 326
>TAIR9_protein||AT1G30460.1 | Symbols: CPSF30, ATCPSF30 | CPSF30; RNA binding /
calmodulin binding / endonuclease/ nucleic acid binding / protein
binding | chr1:10771469-10775323 REVERSE
Length = 632
Score = 58 bits (139), Expect = 7e-009
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +3
Query: 300 NESKKSKPGYQTRYFIIKSLNYDNIQLSLERGIWATQVMNEPILEGAFHNSGRVVLIFSV 479
N + P RYF++KS N +N +LS+++G+WATQ NE L AF + V+LIFSV
Sbjct: 226 NRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSV 285
Query: 480 N 482
N
Sbjct: 286 N 286
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,767,299,574
Number of Sequences: 33410
Number of Extensions: 18767299574
Number of Successful Extensions: 599479896
Number of sequences better than 0.0: 0
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