BLASTX 7.6.2
Query= UN37105 /QuerySize=725
(724 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G20230.1 | Symbols: | 50S ribosomal protein L... 352 2e-097
TAIR9_protein||AT1G08845.1 | Symbols: | structural constituent ... 101 5e-022
TAIR9_protein||AT1G08845.2 | Symbols: | structural constituent ... 101 5e-022
TAIR9_protein||AT3G22450.1 | Symbols: | structural constituent ... 87 1e-017
>TAIR9_protein||AT3G20230.1 | Symbols: | 50S ribosomal protein L18 family |
chr3:7055639-7056679 REVERSE
Length = 188
Score = 352 bits (901), Expect = 2e-097
Identities = 174/188 (92%), Positives = 183/188 (97%)
Frame = +3
Query: 45 MSCLVSSTCSLVPFDSSLTRSTRSSKLGSSLSWQSSFPKFSIDIGSVISSPIVKKDSFVQ 224
MSCL+SSTCSLVPFDS+LTRS R +KLGS++SWQSSFPK SI+IGSVISSPIVKKDSFVQ
Sbjct: 1 MSCLISSTCSLVPFDSNLTRSNRFTKLGSAVSWQSSFPKLSIEIGSVISSPIVKKDSFVQ 60
Query: 225 AAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATT 404
AAWTRRSRGEAAKRPN+KSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATT
Sbjct: 61 AAWTRRSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATT 120
Query: 405 NARDIRTNIPFLVDDEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKE 584
NARDIRTNIP LVD+EACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKE
Sbjct: 121 NARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKE 180
Query: 585 HGIVFVP* 608
HGI+FVP*
Sbjct: 181 HGIIFVP* 188
>TAIR9_protein||AT1G08845.1 | Symbols: | structural constituent of ribosome |
chr1:2839855-2840955 FORWARD
Length = 190
Score = 101 bits (251), Expect = 5e-022
Identities = 48/113 (42%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Frame = +3
Query: 258 AKRPNKK-SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIP 434
+K P+K S+KQRT YM PF L+VF S++F+ A + HR T + ++VA TN++D++ +
Sbjct: 70 SKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLR 129
Query: 435 FLVDDEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 593
D AC IG++++ER+ EADVY SY PR ++ EGK+ V+ ++ ++GI
Sbjct: 130 SRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 182
>TAIR9_protein||AT1G08845.2 | Symbols: | structural constituent of ribosome |
chr1:2838789-2840955 FORWARD
Length = 235
Score = 101 bits (251), Expect = 5e-022
Identities = 48/113 (42%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Frame = +3
Query: 258 AKRPNKK-SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIP 434
+K P+K S+KQRT YM PF L+VF S++F+ A + HR T + ++VA TN++D++ +
Sbjct: 115 SKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLR 174
Query: 435 FLVDDEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 593
D AC IG++++ER+ EADVY SY PR ++ EGK+ V+ ++ ++GI
Sbjct: 175 SRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 227
>TAIR9_protein||AT3G22450.1 | Symbols: | structural constituent of ribosome |
chr3:7962443-7963378 FORWARD
Length = 312
Score = 87 bits (213), Expect = 1e-017
Identities = 40/111 (36%), Positives = 75/111 (67%)
Frame = +3
Query: 261 KRPNKKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPFL 440
KR ++ Q T + PF L+++ S++ + A V+HR TSKV++VA + ++D++ ++
Sbjct: 180 KRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSR 239
Query: 441 VDDEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 593
+ AC +G ++A+RS+E D++ V Y PRKG++IEGKL +V+ + ++G+
Sbjct: 240 RNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGV 290
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,811,281,329
Number of Sequences: 33410
Number of Extensions: 18811281329
Number of Successful Extensions: 599489487
Number of sequences better than 0.0: 0
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