BLASTX 7.6.2
Query= UN37116 /QuerySize=938
(937 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G25080.1 | Symbols: | FUNCTIONS IN: molecular... 334 6e-092
>TAIR9_protein||AT5G25080.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Sas10/Utp3/C1D (InterPro:IPR007146), Exosome-associated factor
Rrp47/DNA strand repair C1D (InterPro:IPR011082); Has 137 Blast hits to
137 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 76;
Fungi - 42; Plants - 16; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink). | chr5:8643782-8646306 FORWARD
Length = 218
Score = 334 bits (855), Expect = 6e-092
Identities = 170/218 (77%), Positives = 198/218 (90%), Gaps = 2/218 (0%)
Frame = +3
Query: 75 EGSSSSSSAAVAGGIVPKSAMEAVKQTLALLEEVKPQLEEMLSLAEPEVLAQMQPLKRAK 254
EG SS AGG+VP+SA+EAV QTLA L+E+KPQLE+ML+LAEPEVLA MQPL+RAK
Sbjct: 2 EGGGGSSGGG-AGGVVPESAIEAVNQTLAYLKELKPQLEQMLTLAEPEVLAAMQPLQRAK 60
Query: 255 VMYMLAEATTTIFNLRLRCTGVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVL 434
M++LAEATTT++ LRLRCTGV+PDDHRVKSEIER++VY+EK Q+C+D+SK PLRPTTVL
Sbjct: 61 TMHLLAEATTTLYELRLRCTGVDPDDHRVKSEIERINVYREKFQKCVDQSKGPLRPTTVL 120
Query: 435 NRQAATRFIEHSLPDLSSAQMQNIRDLSKGEKSRMRYSETNAKKRKYQSNEKQQSVRSAA 614
NRQAATRFIEHSLPDL+S Q Q+IRDLSKGEKSR+RYSET+A+KRKYQSNEK QSV+SAA
Sbjct: 121 NRQAATRFIEHSLPDLTSTQKQSIRDLSKGEKSRIRYSETSARKRKYQSNEK-QSVQSAA 179
Query: 615 KEFLEKAAREFNGNNENGLKGPLVAAADASDDVEMGTA 728
K+FLEKAARE G+NENGLKGPLVAAAD SDDVE+GTA
Sbjct: 180 KDFLEKAAREIIGHNENGLKGPLVAAADGSDDVEVGTA 217
Score = 334 bits (854), Expect = 8e-092
Identities = 168/213 (78%), Positives = 196/213 (92%), Gaps = 1/213 (0%)
Frame = +3
Query: 93 SSAAVAGGIVPKSAMEAVKQTLALLEEVKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLA 272
SS AGG+VP+SA+EAV QTLA L+E+KPQLE+ML+LAEPEVLA MQPL+RAK M++LA
Sbjct: 7 SSGGGAGGVVPESAIEAVNQTLAYLKELKPQLEQMLTLAEPEVLAAMQPLQRAKTMHLLA 66
Query: 273 EATTTIFNLRLRCTGVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAAT 452
EATTT++ LRLRCTGV+PDDHRVKSEIER++VY+EK Q+C+D+SK PLRPTTVLNRQAAT
Sbjct: 67 EATTTLYELRLRCTGVDPDDHRVKSEIERINVYREKFQKCVDQSKGPLRPTTVLNRQAAT 126
Query: 453 RFIEHSLPDLSSAQMQNIRDLSKGEKSRMRYSETNAKKRKYQSNEKQQSVRSAAKEFLEK 632
RFIEHSLPDL+S Q Q+IRDLSKGEKSR+RYSET+A+KRKYQSNEK QSV+SAAK+FLEK
Sbjct: 127 RFIEHSLPDLTSTQKQSIRDLSKGEKSRIRYSETSARKRKYQSNEK-QSVQSAAKDFLEK 185
Query: 633 AAREFNGNNENGLKGPLVAAADASDDVEMGTA* 731
AARE G+NENGLKGPLVAAAD SDDVE+GTA*
Sbjct: 186 AAREIIGHNENGLKGPLVAAADGSDDVEVGTA* 218
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,811,281,329
Number of Sequences: 33410
Number of Extensions: 18811281329
Number of Successful Extensions: 599489487
Number of sequences better than 0.0: 0
|