BLASTX 7.6.2
Query= UN37299 /QuerySize=1005
(1004 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein... 192 5e-048
sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein ... 100 2e-020
sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein... 90 2e-017
sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein... 90 3e-017
sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein ... 89 4e-017
sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZF... 74 1e-012
sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein... 72 4e-012
sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein... 69 4e-011
sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein... 65 5e-010
sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein... 65 7e-010
sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein... 59 5e-008
sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein... 58 8e-008
sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein... 56 4e-007
sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein ... 55 9e-007
sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein... 54 1e-006
sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein... 52 8e-006
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32
OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 192 bits (486), Expect = 5e-048
Identities = 104/142 (73%), Positives = 117/142 (82%), Gaps = 13/142 (9%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFP---- 170
S IGLPLRPGVQ CTFYVQNGFCKFGSTCKFDHP+G IRYNPSASSLADAPVAP+P
Sbjct: 328 SPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSL 387
Query: 171 ---LLPSSSSSAAELISG--DDPYLS---TSRSASNNISAGLIFSQSGVSVPFNDLQLST 326
L + SSS+ ELI+G D Y++ TSRS S NISAGLIFSQSG S+PF++LQLS+
Sbjct: 388 LGALAAAPSSSSTELIAGGAKDAYMTGVPTSRSTS-NISAGLIFSQSGGSIPFSELQLSS 446
Query: 327 QTSLSLTGTRITRQGREIRRSF 392
Q+SL LTG+RITRQGREIRRSF
Sbjct: 447 QSSLPLTGSRITRQGREIRRSF 468
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza
sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 100 bits (248), Expect = 2e-020
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFPLLPS 182
S +GLPLRPG Q C +Y Q+GFCKFG TCKFDHP+G + Y+PSASS+ D P+AP+PL +
Sbjct: 338 SPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYA 397
Query: 183 SSSSAAELISGD--DPYLSTSR-SASNNISAGLIFSQSGVSVPFNDLQLSTQTSLSLTGT 353
+ A S D YL T SA+ + S G +G + + + S G
Sbjct: 398 VAPVAPPSSSSDLRPEYLLTKEFSANQSASPGTTCGPAGAMLKAYAPHMLIRPQTSGAGG 457
Query: 354 RITRQGREI 380
+T G E+
Sbjct: 458 MVTTHGGEL 466
Score = 57 bits (136), Expect = 2e-007
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHP-VGVIRYNPSASSLADAPVAPFPLLP 179
+S G PLR G + CT+YV+ G CKFGSTCKF HP +G + P+ PV P P+
Sbjct: 138 NSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMY----PPVQPQPI-- 191
Query: 180 SSSSSAAELISG 215
SSS + ++G
Sbjct: 192 -SSSHPYQHLAG 202
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58
OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 90 bits (222), Expect = 2e-017
Identities = 53/109 (48%), Positives = 65/109 (59%), Gaps = 9/109 (8%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVG--VIRYNPSASSLADAPVAPFP-- 170
S IGLPLRPG CT + Q+G CKFG CKFDH +G + Y+PS SSL D PVAP+P
Sbjct: 338 SHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSS 397
Query: 171 ---LLPSSSS-SAAELISGDD-PYLSTSRSASNNISAGLIFSQSGVSVP 302
L PSSSS ELIS ++T+ S ++AG+ S VS P
Sbjct: 398 LGTLAPSSSSDQCTELISSSSIEPITTTTGGSETVAAGVSSMTSDVSHP 446
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34
OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 90 bits (221), Expect = 3e-017
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPV-GVIRYNPSASSLADAPVAPFPLLP 179
SSIGLPLRPGV CT + Q+G CKFG CKFDH + + Y+PSASSL D PVAP+P+
Sbjct: 346 SSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPIGS 405
Query: 180 SS-SSSAAELISGDDPYLSTSRSASNNISAGL 272
SS S S+A + S ++P A +++ +GL
Sbjct: 406 SSLSGSSAPVSSSNEPTKEAVTPAVSSMVSGL 437
Score = 53 bits (125), Expect = 3e-006
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNP 128
S +G PLRPG + C++Y++ G CKFG TC+F+HPV + P
Sbjct: 141 SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGP 182
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza
sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 89 bits (219), Expect = 4e-017
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFPLLPS 182
+S+ LPLRPG Q C +Y QNG+C++G CK+DHP+G + Y+PSA L+D P+AP+P+ S
Sbjct: 346 NSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPIAPYPIGFS 405
Query: 183 SSSSAAELISGD--DPYLSTSRSASNNISAGLIFSQS-GVSVPFN----DLQLSTQTSLS 341
++ A S D Y+ST + N +++ + S+ G +P D + QT+ +
Sbjct: 406 IATLAPSSPSPDLRPEYISTKDQSVNQVTSPVAASEPVGSILPKGVFPADTMMRAQTNTT 465
Query: 342 LTGTRITRQGR 374
G+ GR
Sbjct: 466 SGGSSSPGGGR 476
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 74 bits (181), Expect = 1e-012
Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFPLLPS 182
S IGLPLRPG C FY + G CKFG +CKFDHP+G+ YN AS LAD P LL S
Sbjct: 317 SPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYN-VASPLADTPGR--RLLGS 373
Query: 183 SSSSAAELISGD 218
SS +AA +S +
Sbjct: 374 SSGTAALSLSSE 385
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza
sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 72 bits (176), Expect = 4e-012
Identities = 36/89 (40%), Positives = 45/89 (50%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFPLLPS 182
+S+GLPLRPG CTFY + G CKFG CKFDHP+G + Y + S D + L PS
Sbjct: 357 NSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMHYQLSPS 416
Query: 183 SSSSAAELISGDDPYLSTSRSASNNISAG 269
L G +S S I +G
Sbjct: 417 PGHPGILLDGGSGRSHRVPQSDSQQIPSG 445
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza
sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 69 bits (168), Expect = 4e-011
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAP----VAPFP 170
SS+GLPLRPG CTFY + G CKFG CKFDHP+G + Y + S D +AP
Sbjct: 348 SSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSPTGDVSARRMLAP-- 405
Query: 171 LLPSSSSSAAELISGDDPYLSTSRS 245
+P+ S + + +SG ++ S S
Sbjct: 406 -VPAHSEVSPDNVSGRSRRITHSDS 429
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33
OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 65 bits (158), Expect = 5e-010
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSAS 137
SSIGLPLRPG C FY + G CKFG +CKFDHP+ V Y+ +AS
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTAS 357
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57
OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 65 bits (157), Expect = 7e-010
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASS 140
SS+GLPLRPG C FY + G CKFG +CKFDHP+ V YN + +S
Sbjct: 282 SSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTAS 327
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza
sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 59 bits (141), Expect = 5e-008
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDH-----PVGVIRYNPSASSLADAPVAPF 167
S +GLPLRPG + C FY + G CKFG+ CKFDH P+GV Y S+ + P+
Sbjct: 371 SPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAY---GSASTNVPMVR- 426
Query: 168 PLLPSSSSSA 197
LL S S+SA
Sbjct: 427 RLLQSPSASA 436
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67
OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 58 bits (139), Expect = 8e-008
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 13/71 (18%)
Frame = +3
Query: 9 IGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPV-------APF 167
+GLP+RPG + C FY++NG CKFGS CKF+HP +P+A D+P+ +
Sbjct: 189 LGLPIRPGEKECPFYMRNGSCKFGSDCKFNHP------DPTAIGGVDSPLYRGNNGGSFS 242
Query: 168 PLLPSSSSSAA 200
P PS +SS +
Sbjct: 243 PKAPSQASSTS 253
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza
sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 56 bits (133), Expect = 4e-007
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +3
Query: 9 IGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHP 104
+GLPLRPG C++Y+ G CKFG+ CKFDHP
Sbjct: 152 LGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza
sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 55 bits (130), Expect = 9e-007
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +3
Query: 3 SSIGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHPVGVIRYNPSASSLADAPVAPFPLLPS 182
+S GLP+RPG C FY++ G CKFGSTC+F+HP ++ P P LL S
Sbjct: 281 NSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNS 340
Query: 183 SSS 191
S++
Sbjct: 341 SAN 343
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza
sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 54 bits (129), Expect = 1e-006
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 9 IGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHP 104
+GLPLRPG C++Y+ G CKFGS CKF HP
Sbjct: 181 LGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43
OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 52 bits (122), Expect = 8e-006
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +3
Query: 9 IGLPLRPGVQCCTFYVQNGFCKFGSTCKFDHP 104
+GLPLRPG C +Y++NG CK+G+ CKF+HP
Sbjct: 199 LGLPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
Score = 52 bits (122), Expect = 8e-006
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3
Query: 18 PLRPGVQCCTFYVQNGFCKFGSTCKFDHPV 107
P+RPG + C+FY++ G CKFGS+CKF+HP+
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPL 137
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,264,384,081
Number of Sequences: 518415
Number of Extensions: 145264384081
Number of Successful Extensions: 900894833
Number of sequences better than 0.0: 0
|
