BLASTX 7.6.2
Query= UN37498 /QuerySize=559
(558 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G28703.1 | Symbols: | FUNCTIONS IN: molecular... 163 1e-040
TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular... 84 5e-017
TAIR9_protein||AT4G10300.1 | Symbols: | FUNCTIONS IN: molecular... 75 2e-014
>TAIR9_protein||AT4G28703.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type
(InterPro:IPR011051), Protein of unknown function DUF861, cupin-3
(InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G04300.1); Has 311 Blast hits to 311 proteins in 80 species:
Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 76;
Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). |
chr4:14166365-14166798 FORWARD
Length = 108
Score = 163 bits (410), Expect = 1e-040
Identities = 77/96 (80%), Positives = 81/96 (84%), Gaps = 5/96 (5%)
Frame = +2
Query: 149 MADQNPRIIVEKNPSQDRLDELKIKSWPKWGCSPGKYHLKYEAEEICYIVKGKVKVYPKS 328
MADQNPRIIVE+NPSQ RLDELK KSWPKWGCSPGKYHLKYEAEEICYI++GKVKVYPK
Sbjct: 1 MADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPK- 59
Query: 329 SSSSTAASSSLDTGLEWCVEFGAGDIVTFPKEFSCT 436
SSS D +EWCVEFGAGDIVTFPK SCT
Sbjct: 60 ----PPPSSSSDAEVEWCVEFGAGDIVTFPKGLSCT 91
>TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10300.1); Has 364 Blast hits to 364 proteins
in 91 species: Archae - 0; Bacteria - 191; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr3:1140318-1140723 FORWARD
Length = 97
Score = 84 bits (206), Expect = 5e-017
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +2
Query: 170 IIVEKNPSQDRLDELKIKSWPKWGCSPGKYHLKYEAEEICYIVKGKVKVYPKSSS 334
I++E NPS RL +L + SWPKW C PGKY L +E E CY+VKGKVKVYPK SS
Sbjct: 3 IVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSS 57
>TAIR9_protein||AT4G10300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G04300.1); Has 356 Blast hits to 356 proteins
in 93 species: Archae - 0; Bacteria - 181; Metazoa - 0; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr4:6384564-6385946 FORWARD
Length = 135
Score = 75 bits (184), Expect = 2e-014
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 170 IIVEKNPSQDRLDELKIKSWPKWGCSPGKYHLKYEAEEICYIVKGKVKVYPKSS 331
I +EKNP + +L +L ++SWPKWGC P K+ Y A+E CY+++GKVKVYP S
Sbjct: 46 ITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGS 99
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,949,492,630
Number of Sequences: 33410
Number of Extensions: 18949492630
Number of Successful Extensions: 604700959
Number of sequences better than 0.0: 0
|
