BLASTX 7.6.2
Query= UN37529 /QuerySize=910
(909 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24972.1 | Symbols: TPD1 | TPD1 (TAPETUM DETER... 279 2e-075
TAIR9_protein||AT1G32583.1 | Symbols: | FUNCTIONS IN: molecular... 155 5e-038
>TAIR9_protein||AT4G24972.1 | Symbols: TPD1 | TPD1 (TAPETUM DETERMINANT 1) |
chr4:12838220-12839619 FORWARD
Length = 177
Score = 279 bits (713), Expect = 2e-075
Identities = 138/178 (77%), Positives = 155/178 (87%), Gaps = 6/178 (3%)
Frame = +2
Query: 218 MSRRRLLLSATLLSYLLHGMALVSVVASGVEEVSRDNVDLTKTTTLTTSHTHRKMLHLS- 394
M+RRRLL+SATLLSYLL+GMALVSV ASG E++ RDN+DLTKTTT + S +HRKML LS
Sbjct: 1 MNRRRLLVSATLLSYLLYGMALVSVEASGGEKL-RDNLDLTKTTTSSPSISHRKMLLLSP 59
Query: 395 ----HETRADPDRIGEKCKKSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCNISRIHVS 562
E +P+RIGEKCK +DIVVNQA TEPMPNGIPGY VEITNQCMSGC ISRIH++
Sbjct: 60 GTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHIN 119
Query: 563 CGWFSSVKLVNPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYRLAVSFVTCS* 736
CGWFSS KL+NPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPY L+V+FVTC+*
Sbjct: 120 CGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA* 177
>TAIR9_protein||AT1G32583.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein match is: TPD1
(TAPETUM DETERMINANT 1) (TAIR:AT4G24972.1); Has 78 Blast hits to 76
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:11787351-11788103 FORWARD
Length = 180
Score = 155 bits (390), Expect = 5e-038
Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Frame = +2
Query: 374 RKMLHLSHETRADPDRIGEKCKKSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCNISRI 553
RK+L LS + +RIG+ C K DIV+ Q +T P+P+G+P YTVEI N C+S CNI+ I
Sbjct: 61 RKLL-LSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEI 119
Query: 554 HVSCGWFSSVKLVNPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYRLAVSFVTC 730
HVSCGWFSSV+LVNPRVF+R+ YDDCLVN+G+PL G +LSF YAN+F Y L+V+ V+C
Sbjct: 120 HVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,949,492,630
Number of Sequences: 33410
Number of Extensions: 18949492630
Number of Successful Extensions: 604700959
Number of sequences better than 0.0: 0
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