BLASTX 7.6.2
Query= UN37548 /QuerySize=699
(698 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=A... 236 2e-061
sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum ... 62 3e-009
sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum ... 60 2e-008
sp|Q05049|MUC1_XENLA Integumentary mucin C.1 (Fragment) OS=Xenop... 59 2e-008
sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsi... 57 8e-008
sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein ... 57 8e-008
sp|Q13243|SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 OS... 57 1e-007
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 57 1e-007
sp|P36787|VE2_HPV25 Regulatory protein E2 OS=Human papillomaviru... 57 1e-007
sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protei... 56 2e-007
sp|Q5ZLX5|ZRAB2_CHICK Zinc finger Ran-binding domain-containing ... 56 2e-007
sp|Q569Z6|TR150_MOUSE Thyroid hormone receptor-associated protei... 56 2e-007
sp|Q5M7V8|TR150_RAT Thyroid hormone receptor-associated protein ... 56 2e-007
sp|Q5BJ39|TR150_XENLA Thyroid hormone receptor-associated protei... 56 2e-007
sp|P50766|VE2_HPV20 Regulatory protein E2 OS=Human papillomaviru... 54 7e-007
sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxilia... 53 2e-006
sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 ... 52 3e-006
sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS... 52 3e-006
sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 ... 52 4e-006
sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 ... 52 4e-006
>sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis
thaliana GN=RH40 PE=2 SV=1
Length = 1088
Score = 236 bits (600), Expect = 2e-061
Identities = 135/175 (77%), Positives = 138/175 (78%), Gaps = 13/175 (7%)
Frame = +1
Query: 1 GRMNV-GRGGFGRFG-NNNMDGRGFGRGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRP- 171
G MNV GRGGFGRFG NNNM+ RGFGRG GRGF R G GRFDNRRGRSRSRSPDL RP
Sbjct: 908 GHMNVGGRGGFGRFGNNNNMESRGFGRGSGRGFGR--GVGRFDNRRGRSRSRSPDLVRPR 965
Query: 172 RRSPSYSRSRSR----SYSLSRSRSWSRSRSRSPR----RSGHKRSRSYSRSPSPVYERR 327
RRS SYSRSRSR S S SRSRSWSRSRSRSPR R GH RSRSYSRSPSPVYERR
Sbjct: 966 RRSSSYSRSRSRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRSYSRSPSPVYERR 1025
Query: 328 DRRQRVSGFDIKPPAESVVNPDTVGAAASENVVPAPLFERQGNGVVEFELKPALV 492
DR RVSGFDIKPP ESVVN D AAA ENVVP L ERQGNGVVE E++ ALV
Sbjct: 1026 DRAPRVSGFDIKPPVESVVNLDMNAAAAIENVVPTSLSERQGNGVVESEVEAALV 1080
>sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein OS=Mus
musculus GN=Cherp PE=1 SV=1
Length = 936
Score = 62 bits (149), Expect = 3e-009
Identities = 45/83 (54%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 97 RGGGGGRFDNR---RGRSRSRSPD-LFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPR 264
R G R +R RGRS SRS + RS S S SRSRS S SRSRS SRSRSRS R
Sbjct: 741 RNSGPSRSRSRSKSRGRSSSRSSSRSSKSSRSSSRSHSRSRSRSSSRSRSRSRSRSRSSR 800
Query: 265 RSGHKRSRSYSRSPSPVYERRDR 333
RSRS S+S SP RR R
Sbjct: 801 SRSRSRSRSRSKSYSPGRRRRSR 823
>sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum protein OS=Homo
sapiens GN=CHERP PE=1 SV=3
Length = 916
Score = 60 bits (143), Expect = 2e-008
Identities = 49/97 (50%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = +1
Query: 97 RGGGGGRFDNR---RGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRR 267
R G R +R RGRS SRS + + S SYSRSRSRS S S SRS SRSRSRS R
Sbjct: 732 RNSGPSRSRSRSKSRGRSSSRS-NSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRS--R 788
Query: 268 SGHKRSRSYSRSPSPVYERRDRRQRVSGFDIKPPAES 378
S RSRS SRS S Y RR+R PP+ +
Sbjct: 789 SSRSRSRSQSRSRSKSYS-PGRRRRSRSRSPTPPSSA 824
>sp|Q05049|MUC1_XENLA Integumentary mucin C.1 (Fragment) OS=Xenopus laevis PE=2
SV=1
Length = 662
Score = 59 bits (142), Expect = 2e-008
Identities = 40/98 (40%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Frame = -3
Query: 309 TRTTAIASTPFMTTTPRATTP*A*PAPTTAKTIAPAAAPAIARATTWPKQIRTSATASTP 130
T TT +T TTTP TT PTT T A P TT P T AT +TP
Sbjct: 435 TTTTTTTTTKATTTTPTTTT------PTTTTTKATTTTP--TTTTTTPTTTTTKATTTTP 486
Query: 129 SVIKSPTTTTTTKASTTTTTKASTIHIIITKPTKSAST 16
+ + TTTTTKA+TTT T +T T TK+ +T
Sbjct: 487 TTTTTTPTTTTTKATTTTPTTTTT----TTTTTKATTT 520
>sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana
GN=SF2 PE=1 SV=1
Length = 303
Score = 57 bits (137), Expect = 8e-008
Identities = 42/84 (50%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +1
Query: 136 RSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRS--RSYSRSPS 309
R SRSP RS S SRSRSR S+SRSRS SRSRSRSP+ +RS +S SRSP
Sbjct: 198 RKDSRSPS---RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPG 254
Query: 310 PVYERRDRRQRVSGFDIKPPAESV 381
P + R R S + P SV
Sbjct: 255 PRSKSRSPSPRRSRSRSRSPLPSV 278
>sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein 2 OS=Mus
musculus GN=Srrm2 PE=1 SV=2
Length = 2703
Score = 57 bits (137), Expect = 8e-008
Identities = 43/94 (45%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +1
Query: 73 RGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRS 252
RG R RG R RGRSRSR+P RR S SR+ +R S SR+ + RSRS
Sbjct: 548 RGRSRSARRGRSHSRSPATRGRSRSRTP----ARRGRSRSRTPARRRSRSRTPARRRSRS 603
Query: 253 RSPRRSGHKRSRS----YSRSPSPVYER-RDRRQ 339
R+P R G RSR+ SR+ SPV R R R Q
Sbjct: 604 RTPARRGRSRSRTPTRRRSRTRSPVRRRSRSRSQ 637
>sp|Q13243|SFRS5_HUMAN Splicing factor, arginine/serine-rich 5 OS=Homo sapiens
GN=SFRS5 PE=1 SV=1
Length = 272
Score = 57 bits (136), Expect = 1e-007
Identities = 36/68 (52%), Positives = 42/68 (61%)
Frame = +1
Query: 130 RGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSRSYSRSPS 309
R RS SRS R R SYSRSRSRS S SRS+S S SRS P +S + S S S+SP+
Sbjct: 193 RTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRSVSRSPVPEKSQKRGSSSRSKSPA 252
Query: 310 PVYERRDR 333
V +R R
Sbjct: 253 SVDRQRSR 260
>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo
sapiens GN=SRRM2 PE=1 SV=2
Length = 2752
Score = 57 bits (136), Expect = 1e-007
Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +1
Query: 73 RGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRS 252
RG R RG R RGRSRSR+P RR S SR+ +R S SR+ + RSRS
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRTP----ARRGRSRSRTPARRRSRSRTPTRRRSRS 606
Query: 253 RSPRRSGHKRSRS----YSRSPSPVYERRDRR 336
R+P R G RSR+ SR+ SPV R R
Sbjct: 607 RTPARRGRSRSRTPARRRSRTRSPVRRRSRSR 638
>sp|P36787|VE2_HPV25 Regulatory protein E2 OS=Human papillomavirus type 25 GN=E2
PE=3 SV=1
Length = 502
Score = 57 bits (136), Expect = 1e-007
Identities = 40/76 (52%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 76 GGGRGFSRGGGGGRFDNRRGRSRSRSPDL-FRPRRSPSYSRSRSRSYSLSRSRSWSRSRS 252
G G + GR RR SR+R R RRS S SRSRSRS S SR RS SRSRS
Sbjct: 232 GSGERSQQTSTKGRRYERRPSSRTRRQQAQARQRRSRSKSRSRSRSQSRSRIRSRSRSRS 291
Query: 253 RSPRRSGHKRSRSYSR 300
RS +S +RSRS SR
Sbjct: 292 RSESQSSKRRSRSRSR 307
>sp|Q9Y2W1|TR150_HUMAN Thyroid hormone receptor-associated protein 3 OS=Homo
sapiens GN=THRAP3 PE=1 SV=2
Length = 955
Score = 56 bits (134), Expect = 2e-007
Identities = 37/69 (53%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +1
Query: 166 RPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSRSYS------RSPSPVYERR 327
R RS S SRSRSRS+S SRSRS S SRSR R S RSRSYS R+ VY+ R
Sbjct: 12 RSSRSRSASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNR 71
Query: 328 DRRQRVSGF 354
D R G+
Sbjct: 72 DFRGHNRGY 80
>sp|Q5ZLX5|ZRAB2_CHICK Zinc finger Ran-binding domain-containing protein 2
OS=Gallus gallus GN=ZRANB2 PE=2 SV=1
Length = 334
Score = 56 bits (134), Expect = 2e-007
Identities = 40/66 (60%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 124 NRRGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSR-SYSR 300
NRR RS+SRS RS S+S SRSRS S SRS S SRSRSRS R H RSR S SR
Sbjct: 201 NRRSRSKSRSSHSRSSSRSSSHSSSRSRSRSHSRSSSSSRSRSRSSSRE-HSRSRGSKSR 259
Query: 301 SPSPVY 318
S S Y
Sbjct: 260 SSSRSY 265
>sp|Q569Z6|TR150_MOUSE Thyroid hormone receptor-associated protein 3 OS=Mus
musculus GN=Thrap3 PE=1 SV=1
Length = 951
Score = 56 bits (133), Expect = 2e-007
Identities = 37/69 (53%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +1
Query: 166 RPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSRSYS------RSPSPVYERR 327
R RS S SRSRSRS+S SRSRS S SRSR R S RSRSYS R+ VY+ R
Sbjct: 12 RSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNR 71
Query: 328 DRRQRVSGF 354
D R G+
Sbjct: 72 DFRGHNRGY 80
>sp|Q5M7V8|TR150_RAT Thyroid hormone receptor-associated protein 3 OS=Rattus
norvegicus GN=Thrap3 PE=1 SV=1
Length = 951
Score = 56 bits (133), Expect = 2e-007
Identities = 37/69 (53%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +1
Query: 166 RPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSRSYS------RSPSPVYERR 327
R RS S SRSRSRS+S SRSRS S SRSR R S RSRSYS R+ VY+ R
Sbjct: 12 RSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNR 71
Query: 328 DRRQRVSGF 354
D R G+
Sbjct: 72 DFRGHNRGY 80
>sp|Q5BJ39|TR150_XENLA Thyroid hormone receptor-associated protein 3 OS=Xenopus
laevis GN=thrap3 PE=2 SV=1
Length = 951
Score = 56 bits (133), Expect = 2e-007
Identities = 37/69 (53%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = +1
Query: 166 RPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSRSYS------RSPSPVYERR 327
R RS S SRSRSRS+S SRSRS S SRSR R S RSRSYS R+ VY+ R
Sbjct: 12 RSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNR 71
Query: 328 DRRQRVSGF 354
D R G+
Sbjct: 72 DFRGHNRGY 80
>sp|P50766|VE2_HPV20 Regulatory protein E2 OS=Human papillomavirus type 20 GN=E2
PE=3 SV=1
Length = 497
Score = 54 bits (129), Expect = 7e-007
Identities = 37/64 (57%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 112 GRFDNRRGRSRSRSPDLFRP-RRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHKRSR 288
GR RR SR+R R RRS S S+S+SRS S SR RS SRSRS SPRR RSR
Sbjct: 243 GRRYGRRPSSRTRRTTQTRQRRRSRSKSKSKSRSRSRSRHRSRSRSRSESPRRRSRYRSR 302
Query: 289 SYSR 300
S SR
Sbjct: 303 SGSR 306
>sp|Q15696|U2AFM_HUMAN U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 OS=Homo sapiens GN=ZRSR2 PE=1 SV=2
Length = 482
Score = 53 bits (125), Expect = 2e-006
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 130 RGRSRSRSPDLFRPRRSPSYSRSRSRSYSLSRSRSWSRSRSRSPRRSGHK 279
RGR+R RS D R R S S SRSRSR SRS+S SRSRSR RRSG++
Sbjct: 423 RGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGNR 472
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus
GN=Ddx46 PE=1 SV=2
Length = 1032
Score = 52 bits (123), Expect = 3e-006
Identities = 38/104 (36%), Positives = 45/104 (43%)
Frame = +1
Query: 31 GRFGNNNMDGRGFGRGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRS 210
GR G+ + + RG R D RR RSRSR R R RSRSR
Sbjct: 16 GRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE 75
Query: 211 YSLSRSRSWSRSRSRSPRRSGHKRSRSYSRSPSPVYERRDRRQR 342
SR R SRSR R RS + RS S SP ++ + R R
Sbjct: 76 RDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKTKKTENRSR 119
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus
norvegicus GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 52 bits (123), Expect = 3e-006
Identities = 38/104 (36%), Positives = 45/104 (43%)
Frame = +1
Query: 31 GRFGNNNMDGRGFGRGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRS 210
GR G+ + + RG R D RR RSRSR R R RSRSR
Sbjct: 16 GRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE 75
Query: 211 YSLSRSRSWSRSRSRSPRRSGHKRSRSYSRSPSPVYERRDRRQR 342
SR R SRSR R RS + RS S SP ++ + R R
Sbjct: 76 RDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSR 119
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens
GN=DDX46 PE=1 SV=2
Length = 1031
Score = 52 bits (122), Expect = 4e-006
Identities = 38/104 (36%), Positives = 45/104 (43%)
Frame = +1
Query: 31 GRFGNNNMDGRGFGRGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRS 210
GR G+ + + RG R D RR RSRSR R R RSRSR
Sbjct: 16 GRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE 75
Query: 211 YSLSRSRSWSRSRSRSPRRSGHKRSRSYSRSPSPVYERRDRRQR 342
SR R SRSR R RS + RS S SP ++ + R R
Sbjct: 76 RDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSR 119
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii
GN=DDX46 PE=2 SV=1
Length = 1032
Score = 52 bits (122), Expect = 4e-006
Identities = 38/104 (36%), Positives = 45/104 (43%)
Frame = +1
Query: 31 GRFGNNNMDGRGFGRGGGRGFSRGGGGGRFDNRRGRSRSRSPDLFRPRRSPSYSRSRSRS 210
GR G+ + + RG R D RR RSRSR R R RSRSR
Sbjct: 16 GRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE 75
Query: 211 YSLSRSRSWSRSRSRSPRRSGHKRSRSYSRSPSPVYERRDRRQR 342
SR R SRSR R RS + RS S SP ++ + R R
Sbjct: 76 RDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSR 119
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,264,384,081
Number of Sequences: 518415
Number of Extensions: 145264384081
Number of Successful Extensions: 900894833
Number of sequences better than 0.0: 0
|
