BLASTX 7.6.2
Query= UN37580 /QuerySize=1282
(1281 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/... 456 2e-128
TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PR... 355 4e-098
TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PR... 279 3e-075
TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PR... 258 7e-069
TAIR9_protein||AT4G15475.1 | Symbols: | F-box family protein (F... 72 5e-013
TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (F... 53 4e-007
>TAIR9_protein||AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1
INTERACTING PROTEIN 2); ubiquitin-protein ligase |
chr5:26831677-26833260 REVERSE
Length = 528
Score = 456 bits (1172), Expect = 2e-128
Identities = 232/280 (82%), Positives = 244/280 (87%), Gaps = 7/280 (2%)
Frame = +2
Query: 263 VLQMIGEGESSLSEIHLERLQVSYFGLSAVSKCSKVETLHIVKTPECSNFGLIDVAKRCK 442
VLQMI G+SSLSEIHLERLQVS GLSA+SKCS VETLHIVKTPECSNFGLI VA+RCK
Sbjct: 254 VLQMIANGKSSLSEIHLERLQVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCK 313
Query: 443 LLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLAL 622
LLRKLHIDGWRTN+IGDEGLL+VA+HCLNLQELVLIGVNATH S++AIASNCEKLERLAL
Sbjct: 314 LLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLAL 373
Query: 623 CGSGTMGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCKVVTGE 802
CGSGT+GDTEIACIA+KCGALRKFCIKGC VSD GIEALA GCPNLVKLKVKKCKVVTGE
Sbjct: 374 CGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGE 433
Query: 803 IGEWLREQRRTLVVSMDGDETEAAVAVDGESEAAVEEPRVGQAGEIVGSGNGGGGGGSGN 982
IG+WLREQRRTLVVSMDGDETEA V VDGE E VEEPRV QAG IV GG
Sbjct: 434 IGDWLREQRRTLVVSMDGDETEAVVVVDGEVETVVEEPRVAQAGGIVAEIGSSNGG---- 489
Query: 983 NGGSRLAMIRSKFGLFAGRNLVSCRFRRWSHPNNDNGSSS 1102
GGSRLAMIRSK G AGRNLV+C FRRWSH NDN SSS
Sbjct: 490 -GGSRLAMIRSKLGFLAGRNLVTCTFRRWSH--NDNASSS 526
Score = 163 bits (410), Expect = 4e-040
Identities = 83/89 (93%), Positives = 84/89 (94%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 LSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLP---SSPSLRSICLKEL 173
LSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLP SS SLRSICLKEL
Sbjct: 164 LSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKEL 223
Query: 174 VNGQVFEPLVAGTRTLKTLKIIRCLGDWD 260
VNGQVFEPL+A TRTLKTLKIIRCLGDWD
Sbjct: 224 VNGQVFEPLLATTRTLKTLKIIRCLGDWD 252
>TAIR9_protein||AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2);
ubiquitin-protein ligase | chr3:18572788-18574356 FORWARD
Length = 523
Score = 355 bits (910), Expect = 4e-098
Identities = 174/270 (64%), Positives = 210/270 (77%), Gaps = 3/270 (1%)
Frame = +2
Query: 263 VLQMIGEGESSLSEIHLERLQVSYFGLSAVSKCSKVETLHIVKTPECSNFGLIDVAKRCK 442
V +M G G SSL+EI LERLQV+ GL +SKCS +ETLHIVKTP+CSN GL V +RCK
Sbjct: 248 VFEMNGNGNSSLTEIRLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCK 307
Query: 443 LLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLAL 622
LLRKLHIDGWR +IGD+GL++VA+HCLNLQELVLIGV+AT+ S+SAIASNC+KLERLAL
Sbjct: 308 LLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLAL 367
Query: 623 CGSGTMGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCKVVTGE 802
CGSGT+GD EI CIA+KC LRKFCIKGC +SD+G++ALA GCP LVKLKVKKC +VTGE
Sbjct: 368 CGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCPKLVKLKVKKCSLVTGE 427
Query: 803 IGEWLREQRRTLVVSMDGDETEAAVAVDGESEAAVEEPRVGQAGEIVGSGNGGGGGGSGN 982
+ EWLRE+R TLVVSMD DET VDG + +E +A ++ +G GG G
Sbjct: 428 VREWLRERRMTLVVSMDDDETNGVGLVDGGDQRVLETVVEEEAPPVI---DGDGGLGVAG 484
Query: 983 NGGSRLAMIRSKFGLFAGRNLVSCRFRRWS 1072
G LA++++K GL AGRNLV+C RRWS
Sbjct: 485 GGRLGLAILKTKLGLLAGRNLVACTLRRWS 514
Score = 128 bits (320), Expect = 1e-029
Identities = 65/89 (73%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = +3
Query: 3 LSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPSSPSLRSICLKELVNG 182
LS GSC FGAKG+NAMLEHCK+LEELS+KR+RG+HE AE I L S SLRS+ LKELVNG
Sbjct: 162 LSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLSLSASLRSVFLKELVNG 221
Query: 183 QVFEPLVAGTRTLKTLKIIRCLGDWDMFY 269
QVF LVA TRTLK +KIIRCLG+WD +
Sbjct: 222 QVFGSLVA-TRTLKKVKIIRCLGNWDRVF 249
>TAIR9_protein||AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PROTEINE 3);
ubiquitin-protein ligase | chr4:4197847-4199511 REVERSE
Length = 555
Score = 279 bits (713), Expect = 3e-075
Identities = 146/271 (53%), Positives = 188/271 (69%), Gaps = 12/271 (4%)
Frame = +2
Query: 263 VLQMIGEGESSLSEIHLERLQVSYFGLSAVSKCSKVETLHIVKTPECSNFGLIDVAKRCK 442
V + + + +++ EIHLER+Q+S GL+A+SKCS VE LH+VKTP+C+N GL VA+RCK
Sbjct: 283 VFEAVRDKVNAIVEIHLERIQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCK 342
Query: 443 LLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLAL 622
LLRKLHIDGW+TN+IGDEGL+ VA++C NLQELVLIGVN T S+ AI SNC LERLAL
Sbjct: 343 LLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLSLEAIVSNCLNLERLAL 402
Query: 623 CGSGTMGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCKVVTGE 802
CGS T+GDTE+ CIA+KC ALRK CIK C ++D GI+AL GCPNL+K+KVKKC+ VT +
Sbjct: 403 CGSDTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKALGNGCPNLLKVKVKKCRGVTTQ 462
Query: 803 IGEWLREQRRTLVVSMDGDET---EAAVAVDGESEAAVEEPRVGQAGEIVGSGNGGGGGG 973
+ LR++R LVV++D ET E +V G E AVE P +G +G
Sbjct: 463 GADLLRKRRALLVVNLDAPETPIVEGSVGEGGAQENAVEFPPSRLQIPTIGLASG----- 517
Query: 974 SGNNGGSRLAMIRSKFGLFAGRNLVSCRFRR 1066
SR + + + G + RN VSC RR
Sbjct: 518 ----STSRSSSFKLRLGFLSQRNFVSCALRR 544
Score = 102 bits (253), Expect = 6e-022
Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 LSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHL-PSSPSLRSICLKELVN 179
+S GSC FG KG+NA+L C LEELSVKRLRGI AELI ++ SL+ ICLKEL N
Sbjct: 195 VSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKELHN 254
Query: 180 GQVFEPLVAGTRTLKTLKIIRCLGDWDMFYR*SVKERV 293
GQ F PL++G + L+ LKI RC GDWD + +V+++V
Sbjct: 255 GQCFAPLLSGAKGLRILKIFRCSGDWDRVFE-AVRDKV 291
>TAIR9_protein||AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PROTEINE 1);
ubiquitin-protein ligase | chr1:17276103-17277659 REVERSE
Length = 519
Score = 258 bits (658), Expect = 7e-069
Identities = 138/273 (50%), Positives = 177/273 (64%), Gaps = 14/273 (5%)
Frame = +2
Query: 263 VLQMIGEGESSLSEIHLERLQVSYFGLSAVSKCSKVETLHIVKTPECSNFGLIDVAKRCK 442
+LQ + + + EIHLER+QVS LSA+S CS +E+LH+VKTPEC+NFGL +A++CK
Sbjct: 250 LLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCK 309
Query: 443 LLRKLHIDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLAL 622
LRKLHIDGW+ N IGDEGL+AVA+ C LQELVLIGVN T S+ +A+ C LERLAL
Sbjct: 310 RLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKCLNLERLAL 369
Query: 623 CGSGTMGDTEIACIAKKCGALRKFCIKGCAVSDLGIEALAAGCPNLVKLKVKKCKVVTGE 802
CG T GD E++CIA KC ALRK CIK C +SD+GIE LA GCP L K+K+KKCK V G
Sbjct: 370 CGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGVLGG 429
Query: 803 IGEWLREQRRTLVVSMDGDETEAAVA-----VDGESEAAVEEPRVGQAGEIVGSGNGGGG 967
+WLR R L V+ D E E A V G E +E P++ +I+ S
Sbjct: 430 CADWLRTVRPMLSVNADTMEQEHEEAASNDVVGGSQENGIEFPQLN--SQIMAS------ 481
Query: 968 GGSGNNGGSRLAMIRSKFGLFAGRNLVSCRFRR 1066
++ +R +S GLF+G +LV C R+
Sbjct: 482 -SIASSSRNRSGYFKSGIGLFSGMSLVPCTSRQ 513
Score = 106 bits (264), Expect = 3e-023
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Frame = +3
Query: 6 SVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLP--SSPSLRSICLKELVN 179
S GSC+FGAKGV A+L+HC LEELS+KRLRG + A + P ++ SL+SICLKEL N
Sbjct: 162 SCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYN 221
Query: 180 GQVFEPLVAGTRTLKTLKIIRCLGDWDM 263
GQ F P++ G + LK+LK+ RC GDWD+
Sbjct: 222 GQCFGPVIVGAKNLKSLKLFRCSGDWDL 249
>TAIR9_protein||AT4G15475.1 | Symbols: | F-box family protein (FBL4) |
chr4:8845927-8848701 FORWARD
Length = 611
Score = 72 bits (176), Expect = 5e-013
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Frame = +2
Query: 341 LSAVSKCSK-VETLHIVKTPECSNFGLIDVAKRCKLLRKLHIDGWRTNKIGDEGLLAVAR 517
+ V CSK ++++ + + + ++ L V CKLL L++D + I D+GL+AVA+
Sbjct: 210 IDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLD---SEYIHDKGLIAVAQ 266
Query: 518 HCLNLQELVLIGVNATHKSISAIASNCEKLERLALCGSGTMGDTEIACIAKKCGALRKFC 697
C L+ L L V+ T + +A+ C LERLAL D + I K L+
Sbjct: 267 GCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLT 326
Query: 698 IKGC-AVSDLGIEALAAGCPNLVKLKVKKC 784
+ C VS G+EA+A GC L ++++ C
Sbjct: 327 LSDCYFVSCKGLEAIAHGCKELERVEINGC 356
>TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (FBL3) |
chr5:267118-270391 REVERSE
Length = 666
Score = 53 bits (125), Expect = 4e-007
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 461 IDGWRTNKIGDEGLLAVARHCLNLQELVLIGVNATHKSISAIASNCEKLERLALCGSGTM 640
+D R+ GLL +A C+NL E+ L + +A+ + LERL L +
Sbjct: 104 LDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDADAAVVAEARSLERLKLGRCKML 163
Query: 641 GDTEIACIAKKCGALRKFCIKGC-AVSDLGIEALAAGCPNL 760
D I CIA C L +K C V DLG+ LA C ++
Sbjct: 164 TDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDI 204
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,949,492,630
Number of Sequences: 33410
Number of Extensions: 18949492630
Number of Successful Extensions: 604700959
Number of sequences better than 0.0: 0
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