Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN37944


BLASTX 7.6.2

Query= UN37944 /QuerySize=1364
        (1363 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G20800.1 | Symbols:  | rcd1-like cell differen...    299   5e-081
TAIR9_protein||AT5G12980.1 | Symbols:  | rcd1-like cell differen...    240   3e-063
TAIR9_protein||AT2G32550.1 | Symbols:  | rcd1-like cell differen...     82   9e-016

>TAIR9_protein||AT3G20800.1 | Symbols:  | rcd1-like cell differentiation
        protein, putative | chr3:7271412-7273897 REVERSE

          Length = 317

 Score =  299 bits (763), Expect = 5e-081
 Identities = 157/166 (94%), Positives = 158/166 (95%), Gaps = 5/166 (3%)
 Frame = +2

Query: 149 MANLPPSLSMGTPFGGPSTS----VGAPAANKDRNLASAEQLVLDLSNPELRENALLELS 316
           MANLP SLSMGTPFGGPSTS     GAP ANKDRNLASAEQLVLDLSNPELRENALLELS
Sbjct:   1 MANLPSSLSMGTPFGGPSTSAQNPTGAP-ANKDRNLASAEQLVLDLSNPELRENALLELS 59

Query: 317 KKRELFQDLAPLLWNSFGTIAALLQEMVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASH 496
           KKRELFQDLAPLLWNSFGTIAALLQE+VSIYSVLAPPNLTPAQSNRVCNSLALLQCVASH
Sbjct:  60 KKRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASH 119

Query: 497 SDTRMLFLKAHIPLYLYPFLNATSKSRPFEYLRLTSLGVIGALVKV 634
           SDTRMLFLKAHIPLYLYPFLN TSKSRPFEYLRLTSLGVIGALVKV
Sbjct: 120 SDTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV 165


 Score =  294 bits (752), Expect = 9e-080
 Identities = 146/156 (93%), Positives = 149/156 (95%)
 Frame = +3

Query:  744 LPQVDDTEVISFLLSTGIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAER 923
            L +VDDTEVISFLLST IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAER
Sbjct:  162 LVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAER 221

Query:  924 FFAVVRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTFSNC 1103
            FFAV RVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAAL SCLPDSLRDG+FSNC
Sbjct:  222 FFAVGRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNC 281

Query: 1104 LREDQIARRWLQQLVHNVGVGRVPSHQGGGFEHML* 1211
            LRED  ARRWLQQLVHNVGVGRVP+HQGGGFEHML*
Sbjct:  282 LREDPTARRWLQQLVHNVGVGRVPTHQGGGFEHML* 317

>TAIR9_protein||AT5G12980.1 | Symbols:  | rcd1-like cell differentiation
        protein, putative | chr5:4105562-4108139 REVERSE

          Length = 312

 Score =  240 bits (610), Expect = 3e-063
 Identities = 122/162 (75%), Positives = 140/162 (86%), Gaps = 3/162 (1%)
 Frame = +2

Query: 152 ANLPPSLSM-GTPFGGPSTSVGAPAANKDRNLASAEQLVLDLSNPELRENALLELSKKRE 328
           ANLPP LSM      G S+   + ++N DR L+SAEQL+LDLSNPELRENAL ELSKKRE
Sbjct:   2 ANLPPPLSMKSVALSGASSP--SSSSNNDRKLSSAEQLILDLSNPELRENALHELSKKRE 59

Query: 329 LFQDLAPLLWNSFGTIAALLQEMVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTR 508
           +FQDLAPLLW+S GTI ALLQE++++Y  L+PP +TPAQSNRVCN+LALLQCVASH+DTR
Sbjct:  60 IFQDLAPLLWHSVGTIPALLQEIIAVYPALSPPTMTPAQSNRVCNALALLQCVASHTDTR 119

Query: 509 MLFLKAHIPLYLYPFLNATSKSRPFEYLRLTSLGVIGALVKV 634
           MLFLKAH+PLYLY FLN +SKSRPFEYLRLTSLGVIGALVKV
Sbjct: 120 MLFLKAHLPLYLYAFLNTSSKSRPFEYLRLTSLGVIGALVKV 161


 Score =  226 bits (574), Expect = 4e-059
 Identities = 116/155 (74%), Positives = 127/155 (81%), Gaps = 5/155 (3%)
 Frame = +3

Query:  744 LPQVDDTEVISFLLSTGIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAER 923
            L +VDDTEVI FLL T I+PLCLRTME GSELSKTVATFIVQK+LLDDVG++Y+CTTAER
Sbjct:  158 LVKVDDTEVIRFLLQTEIVPLCLRTMENGSELSKTVATFIVQKVLLDDVGLEYMCTTAER 217

Query:  924 FFAVVRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTFSNC 1103
            FFA+ RVLGNMV SL E PS RLLKHIIRCYLRL+DNPRAC ALGSCLPD LRD TFS C
Sbjct:  218 FFALGRVLGNMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGC 277

Query: 1104 LREDQIARRWLQQLVHNVGV-GRVPSHQGGGFEHM 1205
            L +D  A +WLQQL+HNV V GR P     G  HM
Sbjct:  278 LYDDPPAMQWLQQLLHNVNVGGRAPQ----GLAHM 308

>TAIR9_protein||AT2G32550.1 | Symbols:  | rcd1-like cell differentiation family
        protein | chr2:13819406-13822600 FORWARD

          Length = 323

 Score =  82 bits (200), Expect = 9e-016
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
 Frame = +3

Query:  741 LLPQVDDTEVISFLLSTGIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAE 920
            +L   +D  V  +L+ +G++  C++ +E GS  +K VA +I+ KI+  D G+ Y C  A+
Sbjct:  180 MLKASEDGAVNRYLMESGVVGFCVKPIEFGSTETKKVALYILDKIMSTDQGLYYCCVLAD 239

Query:  921 RFFAVVRVLGNMV--QSLVEQPSPRLLKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTF 1094
            RF+ +  +L  ++   S + +P   L   +  CY++LS N RA   +    P  L DGTF
Sbjct:  240 RFYVIDELLKKVLFYLSNMVRPPSSLFSLVTGCYVKLSQNSRARNGIRRYTPFLLFDGTF 299

Query: 1095 SNCLREDQIARRWLQQLVHNV 1157
            S    ED +A     QL+ N+
Sbjct:  300 SRLYAEDPVAANNRIQLLQNL 320


 Score =  68 bits (164), Expect = 1e-011
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
 Frame = +2

Query: 257 QLVLDLSNPE--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEMVSIYSVLA--- 421
           Q V D+  P+  + + AL  L+  R  F+ L  LLW S  T+  +LQE+   Y  LA   
Sbjct:  51 QWVCDIHKPKSYMSDFALHNLAYHRNDFEFLPSLLWESKNTVYIMLQEVFEAYRHLAGHI 110

Query: 422 -----PPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNATSKSRPFE 586
                P  L P    RV N   L Q +A H DT   FL+A +P Y YP ++     +  E
Sbjct: 111 SLRLFPHPLNPL---RVYNVFLLFQSMACHPDTSRQFLRAKMPNYFYPLMDTGLIDKSDE 167

Query: 587 YLRLTSLGVIGALVK 631
            +RL +LGVI  ++K
Sbjct: 168 CMRLAALGVIAHMLK 182

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,132,601,973
Number of Sequences: 33410
Number of Extensions: 19132601973
Number of Successful Extensions: 610221000
Number of sequences better than 0.0: 0