BLASTX 7.6.2
Query= UN37962 /QuerySize=956
(955 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6651027|gb|AAF22135.1|AF127919_1 high mobility group protein ... 308 1e-081
gi|297814400|ref|XP_002875083.1| predicted protein [Arabidopsis ... 247 3e-063
gi|15223947|ref|NP_172943.1| high mobility group protein A [Arab... 243 3e-062
gi|1808590|emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana] 241 1e-061
gi|21536605|gb|AAM60937.1| linker histone protein, putative [Ara... 220 3e-055
gi|297849910|ref|XP_002892836.1| hypothetical protein ARALYDRAFT... 220 4e-055
gi|118485070|gb|ABK94398.1| unknown [Populus trichocarpa] 181 1e-043
gi|224099519|ref|XP_002311516.1| high mobility group family [Pop... 178 1e-042
gi|115479061|ref|NP_001063124.1| Os09g0402100 [Oryza sativa Japo... 177 3e-042
gi|899367|emb|CAA61747.1| HMGI/Y [Pisum sativum] 175 1e-041
gi|255573726|ref|XP_002527784.1| Histone H1, putative [Ricinus c... 175 1e-041
gi|147842416|emb|CAN71833.1| hypothetical protein VITISV_005586 ... 174 2e-041
gi|225424314|ref|XP_002284720.1| PREDICTED: hypothetical protein... 174 3e-041
gi|224069292|ref|XP_002302948.1| high mobility group family [Pop... 167 3e-039
gi|224111478|ref|XP_002315870.1| high mobility group family [Pop... 163 5e-038
gi|1181589|dbj|BAA11766.1| high mobility group protein [Canavali... 159 9e-037
gi|1181591|dbj|BAA11767.1| high mobility group protein [Canavali... 155 1e-035
gi|226501580|ref|NP_001144569.1| hypothetical protein LOC1002775... 155 1e-035
gi|47027043|gb|AAT08736.1| high mobility group I/Y-2 [Hyacinthus... 154 2e-035
gi|255582243|ref|XP_002531913.1| Histone H1, putative [Ricinus c... 141 2e-031
>gi|6651027|gb|AAF22135.1|AF127919_1 high mobility group protein I/Y [Brassica
napus]
Length = 203
Score = 308 bits (787), Expect = 1e-081
Identities = 166/202 (82%), Positives = 175/202 (86%), Gaps = 9/202 (4%)
Frame = +3
Query: 99 MTTETDLELRQSPMA-EQQPS-FNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTA 272
M TET+LE +QSPMA EQQPS F+LPPYPQMIMEAIEAS+DANGCNKT IAKHIESTQT
Sbjct: 1 MATETELEPQQSPMAEEQQPSPFSLPPYPQMIMEAIEASNDANGCNKTAIAKHIESTQT- 59
Query: 273 ALPPSHMTLLSYHLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAA 452
+LPPSHMTLLSYHLNQMKQSGQI MVKNNYMKPDP APPKRGRGRPPKAKPQG+SSHVA
Sbjct: 60 SLPPSHMTLLSYHLNQMKQSGQIAMVKNNYMKPDPQAPPKRGRGRPPKAKPQGESSHVAV 119
Query: 453 PPAPPVTSPRPRGRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVE 632
PAP V+SPRPRGRPPKAK P SSEVE KV +PS GSGRPRGRPPKKQKTESEAVKADVE
Sbjct: 120 -PAPSVSSPRPRGRPPKAKGP-SSEVETKVAAPS-GSGRPRGRPPKKQKTESEAVKADVE 176
Query: 633 PAEEATAPASTGERRGRGRPSK 698
PAE APA RGR +K
Sbjct: 177 PAE---APAGERRGRGRPPKAK 195
>gi|297814400|ref|XP_002875083.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 247 bits (629), Expect = 3e-063
Identities = 132/199 (66%), Positives = 149/199 (74%), Gaps = 12/199 (6%)
Frame = +3
Query: 108 ETDLELRQSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPS 287
E+D +L P A Q F+LPPYP+MIMEAIEAS+D GCNKT IAKHIEST+ LPPS
Sbjct: 5 ESDPQL--DPTAAQNFPFSLPPYPKMIMEAIEASTDPYGCNKTAIAKHIESTK-ITLPPS 61
Query: 288 HMTLLSYHLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPP 467
HMTLLSYHLNQMKQSGQ+++ KNNYMKPDP+ PPKRGRGRPPK KP+ SSHVA PAP
Sbjct: 62 HMTLLSYHLNQMKQSGQLMVFKNNYMKPDPNGPPKRGRGRPPKPKPEAGSSHVATVPAPS 121
Query: 468 VTSPRPRGRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEA 647
+ RPRGRPPK+K+ + SE + KV S SGRPRGRPPKKQKTESE V A +A
Sbjct: 122 ASPSRPRGRPPKSKE-APSEPKEKVPSV---SGRPRGRPPKKQKTESETVN-----ATDA 172
Query: 648 TAPASTGERRGRGRPSKVK 704
GERRGRGRP KVK
Sbjct: 173 PTAKPEGERRGRGRPPKVK 191
>gi|15223947|ref|NP_172943.1| high mobility group protein A [Arabidopsis
thaliana]
Length = 204
Score = 243 bits (620), Expect = 3e-062
Identities = 132/195 (67%), Positives = 150/195 (76%), Gaps = 15/195 (7%)
Frame = +3
Query: 141 AEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQ 320
+ + PSF+LPPYPQMIMEAIE+ +D NGCNKTTIAKHIESTQ LPPSHMTLLSYHLNQ
Sbjct: 15 SSELPSFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHMTLLSYHLNQ 73
Query: 321 MKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTS---PRPR 488
MK++GQ++MVKNNYMKPDP APPKRGRGRPPK K Q +S + AA A V S PR R
Sbjct: 74 MKKTGQLIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSR 133
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTG 668
GRPPK KDPS E KV++ GSGRPRGRPPK+ +T+SE V A EPA +A TG
Sbjct: 134 GRPPKPKDPSEPPQE-KVIT---GSGRPRGRPPKRPRTDSETVAAP-EPAAQA-----TG 183
Query: 669 ERRGRGRPSKVKPAM 713
ERRGRGRP KVKP +
Sbjct: 184 ERRGRGRPPKVKPTV 198
>gi|1808590|emb|CAA71797.1| HMG-I/Y [Arabidopsis thaliana]
Length = 204
Score = 241 bits (614), Expect = 1e-061
Identities = 131/195 (67%), Positives = 149/195 (76%), Gaps = 15/195 (7%)
Frame = +3
Query: 141 AEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQ 320
+ + PSF+LPPYPQMIMEAIE+ +D NGCNKTTIAKHIESTQ LPPSH TLLSYHLNQ
Sbjct: 15 SSELPSFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHTTLLSYHLNQ 73
Query: 321 MKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTS---PRPR 488
MK++GQ++MVKNNYMKPDP APPKRGRGRPPK K Q +S + AA A V S PR R
Sbjct: 74 MKKTGQLIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSR 133
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTG 668
GRPPK KDPS E KV++ GSGRPRGRPPK+ +T+SE V A EPA +A TG
Sbjct: 134 GRPPKPKDPSEPPQE-KVIT---GSGRPRGRPPKRPRTDSETVAAP-EPAAQA-----TG 183
Query: 669 ERRGRGRPSKVKPAM 713
ERRGRGRP KVKP +
Sbjct: 184 ERRGRGRPPKVKPTV 198
>gi|21536605|gb|AAM60937.1| linker histone protein, putative [Arabidopsis
thaliana]
Length = 176
Score = 220 bits (559), Expect = 3e-055
Identities = 122/180 (67%), Positives = 137/180 (76%), Gaps = 15/180 (8%)
Frame = +3
Query: 186 IMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQIVMVKNNYM 365
IMEAIE+ +D NGCNKTTIAKHIESTQ LPPSHMTLLSYHLNQMK++GQ++MVKNNYM
Sbjct: 2 IMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHMTLLSYHLNQMKKTGQLIMVKNNYM 60
Query: 366 KPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTS---PRPRGRPPKAKDPSSSEVE 533
KPDP APPKRGRGRPPK K Q +S + AA A V S PR RGRPPK KDPS E
Sbjct: 61 KPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSRGRPPKPKDPSEPPQE 120
Query: 534 AKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGRGRPSKVKPAM 713
KV++ GSGRPRGRPPK+ +T+SE V A EPA +A TGERRGRGRP KVKP +
Sbjct: 121 -KVIT---GSGRPRGRPPKRPRTDSETVAAP-EPAAQA-----TGERRGRGRPPKVKPTV 170
>gi|297849910|ref|XP_002892836.1| hypothetical protein ARALYDRAFT_888880
[Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 220 bits (558), Expect = 4e-055
Identities = 114/174 (65%), Positives = 133/174 (76%), Gaps = 7/174 (4%)
Frame = +3
Query: 132 SPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
+P + + PS +LPPYP+MIMEAIE+ +D NGCNKTTIAKHIESTQ LPPSH TLLSYH
Sbjct: 13 TPHSSESPSISLPPYPEMIMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHTTLLSYH 71
Query: 312 LNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTSPRPR 488
LNQMK++GQ++MVKNNYMKPDP APPKRGRGRPPK K Q +S + AA A PR R
Sbjct: 72 LNQMKKNGQLIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAAAAVSADPPRSR 131
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEAT 650
GRPPK KDPS E KV + GSGRPRGRPPK+ +T++E V A EPA +AT
Sbjct: 132 GRPPKPKDPSEPPKE-KVTT---GSGRPRGRPPKRSRTDAETVAAP-EPAAQAT 180
>gi|118485070|gb|ABK94398.1| unknown [Populus trichocarpa]
Length = 215
Score = 181 bits (459), Expect = 1e-043
Identities = 95/179 (53%), Positives = 116/179 (64%), Gaps = 14/179 (7%)
Frame = +3
Query: 147 QQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMK 326
QQ S +P YP+MIM A+EA ++ G +KT+I+K IEST LPP+H TLLS+HLN++K
Sbjct: 38 QQQSSTIPQYPEMIMAAVEALNEKEGSSKTSISKQIESTH-PDLPPAHGTLLSHHLNKLK 96
Query: 327 QSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKA 506
QSGQ+V+VKNNYMKPDP+APPKRGRGRPPK K + PP PRPRGRPPK
Sbjct: 97 QSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPK-------LPTPPGSVAGPPRPRGRPPKP 149
Query: 507 KDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGR 683
+DP + K + S GSGRPRGRPPK T AV + P P+ RGR
Sbjct: 150 RDPFAPVASPKKKTASPGSGRPRGRPPKNANTPVPAVSSGAAP------PSGVPRGRGR 202
>gi|224099519|ref|XP_002311516.1| high mobility group family [Populus
trichocarpa]
Length = 207
Score = 178 bits (451), Expect = 1e-042
Identities = 96/179 (53%), Positives = 114/179 (63%), Gaps = 14/179 (7%)
Frame = +3
Query: 147 QQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMK 326
QQ S P YP+MIM AIEA ++ G NKT+I+K IEST LPP+H TLLS+HLN+MK
Sbjct: 30 QQQSSAPPQYPEMIMAAIEALNEKEGSNKTSISKQIESTH-PDLPPAHSTLLSHHLNKMK 88
Query: 327 QSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKA 506
QSGQ+V+VKNNYMKPDP+APPKRGRGRPPK K + PP PRPRGRPPK
Sbjct: 89 QSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPK-------LPTPPGTVSGPPRPRGRPPKP 141
Query: 507 KDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGR 683
+DP + K + S G+GRPRGRPPK T A + P P+ RGR
Sbjct: 142 RDPFAPVASPKKKTTSTGTGRPRGRPPKNASTAVPAASSGGAP------PSGARRGRGR 194
>gi|115479061|ref|NP_001063124.1| Os09g0402100 [Oryza sativa Japonica Group]
Length = 213
Score = 177 bits (448), Expect = 3e-042
Identities = 107/214 (50%), Positives = 130/214 (60%), Gaps = 15/214 (7%)
Frame = +3
Query: 105 TETDLELRQSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPP 284
TE D + A+ +P+ P YP+MI+ AIEA D NG NKT I++HIE LPP
Sbjct: 3 TEEDASTMAAAEADPKPAAT-PSYPEMILAAIEALDDRNGSNKTAISQHIEGKYEGLLPP 61
Query: 285 SHMTLLSYHLNQMKQSGQIVMVKNNYMK-PDPHAPPKRGRGRPPKAK--PQGDSSHVAAP 455
+H +LL+ HL +MKQ+G++ KNNY + DP PPKRGRGRPPK K ++ AP
Sbjct: 62 AHPSLLTAHLARMKQTGELAFSKNNYFRGDDPSLPPKRGRGRPPKPKDAAAAAAAPAPAP 121
Query: 456 PAPPVTSPRPRGRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESE----AVKA 623
AP +SPRPRGRPPK KDP +E AK S G R RGRPPKK K E E A A
Sbjct: 122 AAPAASSPRPRGRPPKPKDP-LAEAVAKATS---GMPRARGRPPKKAKVEQEDPIGAPAA 177
Query: 624 DVEPAEEATAPASTGERRGRGRPSKVKPAMVPVG 725
PA A A A+ +RGRGRP KV+PA PVG
Sbjct: 178 ASAPA--AAAEAAPPVKRGRGRPPKVRPA-APVG 208
>gi|899367|emb|CAA61747.1| HMGI/Y [Pisum sativum]
Length = 197
Score = 175 bits (443), Expect = 1e-041
Identities = 98/204 (48%), Positives = 127/204 (62%), Gaps = 25/204 (12%)
Frame = +3
Query: 144 EQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQM 323
E +LPPYP++I++AI++ ++ NG NK+ I+ +IES LP H +L YHLNQM
Sbjct: 5 EVNKPLSLPPYPELILKAIDSLNEPNGSNKSAISNYIESVY-GELPEGHSVVLLYHLNQM 63
Query: 324 KQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPK 503
K+SG +V KNNY++PDP+APPKRGRGRPPKAK +A+PP+ V++PRPRGRPP
Sbjct: 64 KESGDLVFAKNNYLRPDPNAPPKRGRGRPPKAK-----DPLASPPSGAVSTPRPRGRPP- 117
Query: 504 AKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTES-----------EAVKADVEPAEEAT 650
KDP++ K + GSGRPRGRP K +TE AV DV A
Sbjct: 118 -KDPNAPPKTPK----ASGSGRPRGRPKKIARTEDVDASTPSPVSVAAVNVDVVVPCVAA 172
Query: 651 APASTGERRGRGRPSKVKPAMVPV 722
P S+G R RGRP KVKP + V
Sbjct: 173 VPTSSG--RPRGRPPKVKPQLTQV 194
>gi|255573726|ref|XP_002527784.1| Histone H1, putative [Ricinus communis]
Length = 199
Score = 175 bits (442), Expect = 1e-041
Identities = 90/186 (48%), Positives = 116/186 (62%), Gaps = 14/186 (7%)
Frame = +3
Query: 126 RQSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLS 305
++ P +QQ +P YP+MI+ AIE+ +D NG NK+ I+K +E+T LPP+H TLLS
Sbjct: 15 QEQPQQQQQQPSTIPQYPEMILAAIESLNDKNGSNKSAISKQMETTY-PDLPPAHTTLLS 73
Query: 306 YHLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRP 485
+HLN+MKQSGQ+V+VKNNYMKPDP+APPKRGRGRPPK K PP + PRP
Sbjct: 74 HHLNKMKQSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPK-------APLPPGAVIAPPRP 126
Query: 486 RGRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPAST 665
RGRPPK +DP + K + +GRPRGRPPK A P+ + A +
Sbjct: 127 RGRPPKPRDPFAPVASPKKKIATAPTGRPRGRPPKLPSA------APPTPSVSSAAASQV 180
Query: 666 GERRGR 683
RGR
Sbjct: 181 KRGRGR 186
>gi|147842416|emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis
vinifera]
Length = 182
Score = 174 bits (440), Expect = 2e-041
Identities = 93/176 (52%), Positives = 116/176 (65%), Gaps = 13/176 (7%)
Frame = +3
Query: 129 QSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSY 308
+ P QP ++P Y +MIM AIEA +D +G NK++I+K+IEST LP +H TLL++
Sbjct: 4 EEPNNPPQPPSSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTY-GDLPAAHSTLLAH 62
Query: 309 HLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPR 488
HLN+MKQSG +VMVKNNYMKPDP+APP+RGRGRPPK K V PP + PRPR
Sbjct: 63 HLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPK-------VPLPPGTVLAPPRPR 115
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAP 656
GRPPK +DP + K S GSG+PRGRPPKK K + + A PA A P
Sbjct: 116 GRPPKPRDPFAPVSPPK--KASSGSGKPRGRPPKKPKVGTSSAPA---PATGAPRP 166
>gi|225424314|ref|XP_002284720.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 182
Score = 174 bits (439), Expect = 3e-041
Identities = 93/176 (52%), Positives = 115/176 (65%), Gaps = 13/176 (7%)
Frame = +3
Query: 129 QSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSY 308
+ P QP ++P Y +MIM AIEA +D G NK++I+K+IEST LP +H TLL++
Sbjct: 4 EEPNNPPQPPSSIPQYSEMIMAAIEALNDKGGSNKSSISKYIESTY-GDLPAAHSTLLAH 62
Query: 309 HLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPR 488
HLN+MKQSG +VMVKNNYMKPDP+APP+RGRGRPPK K V PP + PRPR
Sbjct: 63 HLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPK-------VPLPPGTVLAPPRPR 115
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAP 656
GRPPK +DP + K S GSG+PRGRPPKK K + + A PA A P
Sbjct: 116 GRPPKPRDPFAPVSPPK--KASSGSGKPRGRPPKKPKVGTSSAPA---PATGAPRP 166
>gi|224069292|ref|XP_002302948.1| high mobility group family [Populus
trichocarpa]
Length = 190
Score = 167 bits (421), Expect = 3e-039
Identities = 92/182 (50%), Positives = 117/182 (64%), Gaps = 14/182 (7%)
Frame = +3
Query: 162 NLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQI 341
+LPPYP+MI+ AIEA ++ANGCNKT+I+K+IES + LP H LLS+HLN+MK +G++
Sbjct: 11 SLPPYPEMILSAIEALNEANGCNKTSISKYIES-KYGDLPAGHTALLSHHLNRMKDTGEL 69
Query: 342 VMVKNNYMKPDPHAPPKRGRGRPPKAK-PQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPS 518
V KNNYMKPDP+APP+RGRGRPPK K P S + PPA RPRGRPP KDP+
Sbjct: 70 VFWKNNYMKPDPNAPPRRGRGRPPKPKDPLSPGSDL--PPA------RPRGRPP--KDPN 119
Query: 519 SSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGRGRPSK 698
+ K + +G SG+PRGRP K + + P + G R RGRP K
Sbjct: 120 APPKPVKPKAATGRSGKPRGRPRKMARPTGGITTGTA--TTTSAVPMTAGSGRPRGRPPK 177
Query: 699 VK 704
VK
Sbjct: 178 VK 179
>gi|224111478|ref|XP_002315870.1| high mobility group family [Populus
trichocarpa]
Length = 164
Score = 163 bits (411), Expect = 5e-038
Identities = 86/163 (52%), Positives = 105/163 (64%), Gaps = 14/163 (8%)
Frame = +3
Query: 195 AIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQIVMVKNNYMKPD 374
A+EA ++ G +KT+I+K IEST LPP+H TLLS+HLN++KQSGQ+V+VKNNYMKPD
Sbjct: 3 AVEALNEKEGSSKTSISKQIESTH-PDLPPAHGTLLSHHLNKLKQSGQLVLVKNNYMKPD 61
Query: 375 PHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSSSEVEAKVVSPS 554
P+APPKRGRGRPPK K + PP PRPRGRPPK +DP + K + S
Sbjct: 62 PNAPPKRGRGRPPKPK-------LPTPPGSVAGPPRPRGRPPKPRDPFAPVASPKKKTAS 114
Query: 555 GGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGR 683
GSGRPRGRPPK T AV + P P+ RGR
Sbjct: 115 PGSGRPRGRPPKNANTPVPAVSSGAAP------PSGVPRGRGR 151
>gi|1181589|dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
Length = 178
Score = 159 bits (400), Expect = 9e-037
Identities = 79/143 (55%), Positives = 102/143 (71%), Gaps = 11/143 (7%)
Frame = +3
Query: 162 NLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQI 341
+LPPYP+M+M+A++A ++ +G NK+ I+K+IEST LP H TLL++HLN+MK SG++
Sbjct: 11 SLPPYPEMVMKALDALNEPSGSNKSAISKYIESTY-GELPDGHATLLAHHLNKMKDSGEL 69
Query: 342 VMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSS 521
V +KNNYMKPDP+APPKRGRGRPPK K V PP ++ PRPRGRPPK +
Sbjct: 70 VFLKNNYMKPDPNAPPKRGRGRPPKPK-------VPLPPGTVLSPPRPRGRPPKDPNAPP 122
Query: 522 SEVEAKVVSPSGGSGRPRGRPPK 590
+ KV S GSGRPRGRP K
Sbjct: 123 KSPKTKV---STGSGRPRGRPKK 142
>gi|1181591|dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
Length = 178
Score = 155 bits (391), Expect = 1e-035
Identities = 78/143 (54%), Positives = 102/143 (71%), Gaps = 11/143 (7%)
Frame = +3
Query: 162 NLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQI 341
+LPPY +MI +A+++ ++ NG NK+ I+K+IEST LP H TLL++HLN+MK+SG++
Sbjct: 11 SLPPYTEMITKALDSLNEPNGSNKSAISKYIEST-CGELPDGHSTLLAHHLNKMKESGEL 69
Query: 342 VMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSS 521
V +KNNYMKPDP +PPKRGRGRPPK K V PP ++ PRPRGRPPK + +
Sbjct: 70 VFLKNNYMKPDPTSPPKRGRGRPPKPK-------VPLPPGTVLSPPRPRGRPPKDPNAPT 122
Query: 522 SEVEAKVVSPSGGSGRPRGRPPK 590
+AKV S GSGRPRGRP K
Sbjct: 123 KSPKAKV---STGSGRPRGRPKK 142
>gi|226501580|ref|NP_001144569.1| hypothetical protein LOC100277576 [Zea mays]
Length = 183
Score = 155 bits (390), Expect = 1e-035
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 16/172 (9%)
Frame = +3
Query: 165 LPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQIV 344
+PPYP+MI+ AIE D +G NK+ I+++IE LPP+H +LL+ HL +MK+SG++V
Sbjct: 12 IPPYPEMILAAIEDLCDKSGSNKSAISRYIEGKYDGDLPPAHASLLAAHLARMKESGELV 71
Query: 345 MVKNNYMKPD-PHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSS 521
VKNNY + D P APPKRGRGRPPKA+ G AP +PP S R RGRPPK KDP
Sbjct: 72 FVKNNYFRADAPDAPPKRGRGRPPKARDPG------APVSPP--SGRGRGRPPKPKDP-- 121
Query: 522 SEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERR 677
++A V + G R RGRPPKK KTE A A PA + + P G R
Sbjct: 122 --LDAAVKQATAGMPRARGRPPKKAKTEGGASPA---PAGDGSTPVKRGRGR 168
>gi|47027043|gb|AAT08736.1| high mobility group I/Y-2 [Hyacinthus orientalis]
Length = 180
Score = 154 bits (389), Expect = 2e-035
Identities = 89/176 (50%), Positives = 109/176 (61%), Gaps = 12/176 (6%)
Frame = +3
Query: 165 LPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQIV 344
LP Y +MIM AIEA + G NK+ I+K+IES LP +H +LL+ HL +MK+SG+I+
Sbjct: 4 LPSYSEMIMGAIEALDEKAGSNKSAISKYIESKYAEQLPEAHSSLLTAHLARMKESGEIL 63
Query: 345 MVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSSS 524
MVKNNYMKP P A PKRGRGRPPK K + +A +P SPRPRGRPPK KDP
Sbjct: 64 MVKNNYMKPGPEATPKRGRGRPPKPK----TPLLAGSVSP---SPRPRGRPPKPKDP--- 113
Query: 525 EVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTGERRGRGRP 692
+ A V + G R RGRPPKK + P+ A A A G +RGRGRP
Sbjct: 114 -LAAAVAKAASGMPRQRGRPPKKARVGGGEDIPPTPPSVAAPA-APPGIKRGRGRP 167
>gi|255582243|ref|XP_002531913.1| Histone H1, putative [Ricinus communis]
Length = 166
Score = 141 bits (354), Expect = 2e-031
Identities = 75/142 (52%), Positives = 91/142 (64%), Gaps = 10/142 (7%)
Frame = +3
Query: 165 LPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQMKQSGQIV 344
LPPYPQMI+ AI A D NG NKT+I+K+IES + LP H LL++HL +MK +G++V
Sbjct: 13 LPPYPQMILAAIAALDDKNGSNKTSISKYIES-KYGDLPAGHTALLTHHLARMKDTGELV 71
Query: 345 MVKNNYMKPDPHAPPKRGRGRPPKAKPQGDSSHVAAPPAPPVTSPRPRGRPPKAKDPSSS 524
KNNYM PDP+APP+RGRGRPPK K V PP +PRGRPP DP +
Sbjct: 72 FWKNNYMIPDPNAPPRRGRGRPPKPK-------VPLPPGSVPIPAKPRGRPP--NDPDAP 122
Query: 525 EVEAKVVSPSGGSGRPRGRPPK 590
K + GSGRPRGRP K
Sbjct: 123 PKPVKPKPAATGSGRPRGRPRK 144
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,281,875,611,404
Number of Sequences: 15229318
Number of Extensions: 4281875611404
Number of Successful Extensions: 1013544274
Number of sequences better than 0.0: 0
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