BLASTX 7.6.2
Query= UN37962 /QuerySize=956
(955 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY... 251 7e-067
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility... 65 7e-011
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 50 2e-006
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 50 2e-006
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 50 2e-006
>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
binding | chr1:5138665-5139353 REVERSE
Length = 205
Score = 251 bits (639), Expect = 7e-067
Identities = 137/202 (67%), Positives = 155/202 (76%), Gaps = 16/202 (7%)
Frame = +3
Query: 141 AEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQ 320
+ + PSF+LPPYPQMIMEAIE+ +D NGCNKTTIAKHIESTQ LPPSHMTLLSYHLNQ
Sbjct: 15 SSELPSFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHMTLLSYHLNQ 73
Query: 321 MKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTS---PRPR 488
MK++GQ++MVKNNYMKPDP APPKRGRGRPPK K Q +S + AA A V S PR R
Sbjct: 74 MKKTGQLIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSR 133
Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTG 668
GRPPK KDPS E KV++ GSGRPRGRPPK+ +T+SE V A EPA +A TG
Sbjct: 134 GRPPKPKDPSEPPQE-KVIT---GSGRPRGRPPKRPRTDSETVAAP-EPAAQA-----TG 183
Query: 669 ERRGRGRPSKVKPAMV-PVGC* 731
ERRGRGRP KVKP +V PVGC*
Sbjct: 184 ERRGRGRPPKVKPTVVAPVGC* 205
>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
5); DNA binding | chr1:17974148-17976301 REVERSE
Length = 480
Score = 65 bits (156), Expect = 7e-011
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +3
Query: 129 QSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSY 308
Q+ PS + PPY MI AI A ++ +G +K I+++IE T +P +H LL++
Sbjct: 63 QTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYT-GIPTAHGALLTH 121
Query: 309 HLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGD 434
HL +K SG +VMVK +Y PP P P+ D
Sbjct: 122 HLKTLKTSGILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSD 163
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 50 bits (117), Expect = 2e-006
Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
Q S N PP +IMEAI + GCNKTTI +IE A PP LLS
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164
Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
L + G++V VK Y P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 50 bits (117), Expect = 2e-006
Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
Q S N PP +IMEAI + GCNKTTI +IE A PP LLS
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164
Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
L + G++V VK Y P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 50 bits (117), Expect = 2e-006
Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
Q S N PP +IMEAI + GCNKTTI +IE A PP LLS
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164
Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
L + G++V VK Y P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,132,601,973
Number of Sequences: 33410
Number of Extensions: 19132601973
Number of Successful Extensions: 610221000
Number of sequences better than 0.0: 0
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