Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN37962


BLASTX 7.6.2

Query= UN37962 /QuerySize=956
        (955 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY...    251   7e-067
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility...     65   7e-011
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding...     50   2e-006
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding...     50   2e-006
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding...     50   2e-006

>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
        binding | chr1:5138665-5139353 REVERSE

          Length = 205

 Score =  251 bits (639), Expect = 7e-067
 Identities = 137/202 (67%), Positives = 155/202 (76%), Gaps = 16/202 (7%)
 Frame = +3

Query: 141 AEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYHLNQ 320
           + + PSF+LPPYPQMIMEAIE+ +D NGCNKTTIAKHIESTQ   LPPSHMTLLSYHLNQ
Sbjct:  15 SSELPSFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQ-QTLPPSHMTLLSYHLNQ 73

Query: 321 MKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGDS-SHVAAPPAPPVTS---PRPR 488
           MK++GQ++MVKNNYMKPDP APPKRGRGRPPK K Q +S +  AA  A  V S   PR R
Sbjct:  74 MKKTGQLIMVKNNYMKPDPDAPPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSR 133

Query: 489 GRPPKAKDPSSSEVEAKVVSPSGGSGRPRGRPPKKQKTESEAVKADVEPAEEATAPASTG 668
           GRPPK KDPS    E KV++   GSGRPRGRPPK+ +T+SE V A  EPA +A     TG
Sbjct: 134 GRPPKPKDPSEPPQE-KVIT---GSGRPRGRPPKRPRTDSETVAAP-EPAAQA-----TG 183

Query: 669 ERRGRGRPSKVKPAMV-PVGC* 731
           ERRGRGRP KVKP +V PVGC*
Sbjct: 184 ERRGRGRPPKVKPTVVAPVGC* 205

>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
        5); DNA binding | chr1:17974148-17976301 REVERSE

          Length = 480

 Score =  65 bits (156), Expect = 7e-011
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +3

Query: 129 QSPMAEQQPSFNLPPYPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSY 308
           Q+      PS + PPY  MI  AI A ++ +G +K  I+++IE   T  +P +H  LL++
Sbjct:  63 QTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYT-GIPTAHGALLTH 121

Query: 309 HLNQMKQSGQIVMVKNNYMKPDPHAPPKRGRGRPPKAKPQGD 434
           HL  +K SG +VMVK +Y       PP      P    P+ D
Sbjct: 122 HLKTLKTSGILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSD 163

>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
        putative | chr1:18494439-18496713 REVERSE

          Length = 301

 Score =  50 bits (117), Expect = 2e-006
 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
           Q S N PP         +IMEAI    +  GCNKTTI  +IE    A  PP    LLS  
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164

Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
           L  +   G++V VK  Y  P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185

>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
        putative | chr1:18494439-18496713 REVERSE

          Length = 301

 Score =  50 bits (117), Expect = 2e-006
 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
           Q S N PP         +IMEAI    +  GCNKTTI  +IE    A  PP    LLS  
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164

Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
           L  +   G++V VK  Y  P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185

>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
        putative | chr1:18494439-18496713 REVERSE

          Length = 301

 Score =  50 bits (117), Expect = 2e-006
 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 QPSFNLPP------YPQMIMEAIEASSDANGCNKTTIAKHIESTQTAALPPSHMTLLSYH 311
           Q S N PP         +IMEAI    +  GCNKTTI  +IE    A  PP    LLS  
Sbjct: 107 QVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA--PPDFKRLLSTK 164

Query: 312 LNQMKQSGQIVMVKNNYMKPD 374
           L  +   G++V VK  Y  P+
Sbjct: 165 LKYLTSCGKLVKVKRKYRIPN 185

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,132,601,973
Number of Sequences: 33410
Number of Extensions: 19132601973
Number of Successful Extensions: 610221000
Number of sequences better than 0.0: 0