BLASTX 7.6.2
Query= UN38188 /QuerySize=1130
(1129 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 219 4e-056
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 188 6e-047
sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 141 1e-032
sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 141 1e-032
sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 139 3e-032
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 139 3e-032
sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 139 4e-032
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 110 3e-023
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 108 8e-023
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 77 3e-013
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 75 6e-013
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 75 6e-013
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 75 6e-013
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 74 2e-012
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 73 4e-012
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 72 9e-012
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 70 3e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 70 3e-011
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 219 bits (556), Expect = 4e-056
Identities = 120/279 (43%), Positives = 166/279 (59%), Gaps = 9/279 (3%)
Frame = -1
Query: 997 ETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNSEQL 818
E ++ ++ G+ VK+IRN+ T + GY FVEF S A + + N +P + L
Sbjct: 106 EAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHL 164
Query: 817 FRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNT 638
F+LNWAS ++++ E SIFVGDLSP+V + + LF RY S KSAK++ D T
Sbjct: 165 FKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQT 224
Query: 637 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQHHHPSQALIL 458
S+GYGFVRF DEN++ AL EM G C +R +RVG+ATPK + H S ++
Sbjct: 225 NVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK------SKAHVFSPVNVV 278
Query: 457 AGGHGANGY--MAHGSQSDGESNNSTIFVGGIDPDVTEEDLRQPFSQFGEVVSVKIPVGK 284
G+ A ++ NST+FVGG+ V+EE+L+ F FGE+V VKIP GK
Sbjct: 279 PVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGK 338
Query: 283 GCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPN 167
GCGFVQ NR+SA+ AI L G +G + +RLSWGR+ N
Sbjct: 339 GCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQN 377
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 188 bits (477), Expect = 6e-047
Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 15/315 (4%)
Frame = -1
Query: 1108 APSSLPIRVVSTATQDT*AWIWR*CEDSMDW*SSLLDETYLHNCFSHTGEVSSVKVIRNK 929
+PSS P++ V+ +W D W +D T++ ++ E +VKV+R+K
Sbjct: 67 SPSSTPLQDVAGVGSKMSDTLW--MGDLEPW----MDATFIQQLWASLNEPVNVKVMRSK 120
Query: 928 LTCQSE--GYGFVEFLSRATAEEVLQNFNGSVMPNSEQLFRLNWAS-FSTGEKRAVENGP 758
+ Y FV+F S A AE L +N +++P + F+LNWA+ V P
Sbjct: 121 ASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDP 180
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
E SIFVGDL P D+ L F YPS SAK+++D TG S+ YGFVRF E E+ A
Sbjct: 181 EFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHA 240
Query: 577 LTEMNGAYCSNRQMRVGVATPKRAVANQQQHHHPSQALILAGGHGANGYMAHGSQSDGES 398
L M G C R +R+ VA+PK + AL + +N + +
Sbjct: 241 LMHMQGYLCQGRPLRISVASPKSRASIA-----ADSALGIVPTSTSN-RQPNQDLCSMDP 294
Query: 397 NNSTIFVGGIDPDVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNG 218
N+T+FVGG+ +++E+DL+ F FG ++++KIP GKGCGFVQ + + +A+ AI ++ G
Sbjct: 295 LNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQG 354
Query: 217 TVIGKNTVRLSWGRS 173
++G + +RL+WG +
Sbjct: 355 ALVGTSHIRLAWGHN 369
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1 OS=Bos taurus
GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 141 bits (354), Expect = 1e-032
Identities = 81/168 (48%), Positives = 109/168 (64%), Gaps = 9/168 (5%)
Frame = -1
Query: 1003 LDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNS 827
+DE ++ F+ GE V SVK+IRN+LT GY FVEF ATAE+ L NG +P +
Sbjct: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
Query: 826 --EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVV 653
+ F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+ YPS + KVV
Sbjct: 74 TPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVV 129
Query: 652 IDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 512
+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 130 LD-QTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK 176
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1 OS=Homo
sapiens GN=TRNAU1AP PE=1 SV=1
Length = 287
Score = 141 bits (354), Expect = 1e-032
Identities = 81/168 (48%), Positives = 109/168 (64%), Gaps = 9/168 (5%)
Frame = -1
Query: 1003 LDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNS 827
+DE ++ F+ GE V SVK+IRN+LT GY FVEF ATAE+ L NG +P +
Sbjct: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
Query: 826 --EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVV 653
+ F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+ YPS + KVV
Sbjct: 74 TPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVV 129
Query: 652 IDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 512
+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 130 LD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1 OS=Pongo
abelii GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 139 bits (350), Expect = 3e-032
Identities = 80/168 (47%), Positives = 108/168 (64%), Gaps = 9/168 (5%)
Frame = -1
Query: 1003 LDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNS 827
+DE ++ F+ GE V SVK+IRN+LT GY FVEF ATAE+ L NG +P +
Sbjct: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
Query: 826 --EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVV 653
+ F+LN+ ++ + +N PE S+FVGDL+PDV D +L E FV+ YPS + KVV
Sbjct: 74 TPAKRFKLNYVTYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVV 129
Query: 652 IDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 512
+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 130 LD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus
norvegicus GN=Trnau1ap PE=1 SV=1
Length = 287
Score = 139 bits (350), Expect = 3e-032
Identities = 81/168 (48%), Positives = 108/168 (64%), Gaps = 9/168 (5%)
Frame = -1
Query: 1003 LDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNS 827
+DE ++ F+ GE V SVK+IRN+LT GY FVEF ATAE+ L NG +P +
Sbjct: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
Query: 826 --EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVV 653
+ F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+ YPS + KVV
Sbjct: 74 TPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVV 129
Query: 652 IDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 512
+D TG SKGYGFV+F DE E+ RALTE GA + +R+ VA PK
Sbjct: 130 LD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPK 176
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1 OS=Mus
musculus GN=Trnau1ap PE=1 SV=2
Length = 287
Score = 139 bits (349), Expect = 4e-032
Identities = 81/168 (48%), Positives = 108/168 (64%), Gaps = 9/168 (5%)
Frame = -1
Query: 1003 LDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVLQNFNGSVMPNS 827
+DE ++ F+ GE V SVK+IRN+LT GY FVEF ATAE+ L NG +P +
Sbjct: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
Query: 826 --EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVV 653
+ F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+ YPS + KVV
Sbjct: 74 TPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVV 129
Query: 652 IDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 512
+D TG SKGYGFV+F DE E+ RALTE GA + +R+ VA PK
Sbjct: 130 LDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPK 176
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 110 bits (273), Expect = 3e-023
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Frame = -1
Query: 850 NGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSV 671
N P ++ FRLNWAS +T + ++ + PE S+FVGDLSP T+ L LF R+ SV
Sbjct: 161 NSQTNPTFKRTFRLNWASGATLQS-SIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSV 219
Query: 670 KSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQ 491
K+ +V+ D TG S+ +GFVRFGDE+ER RAL EM+G + R +RV ATP+ + Q
Sbjct: 220 KTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQL 279
Query: 490 QHHHPSQ 470
Q Q
Sbjct: 280 QEQQQQQ 286
Score = 81 bits (199), Expect = 1e-014
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = -1
Query: 403 ESNNSTIFVGGIDPDVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQLANRKSADDAIQSL 224
+ N+T+FVGG+ P TE LR F FG +++V+IP GK CGFV+ R A+ +IQ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 223 NGTVIGKNTVRLSWGR 176
G ++G + +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 108 bits (269), Expect = 8e-023
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 12/149 (8%)
Frame = -1
Query: 916 SEGYGFVEFLSRATAEEVLQNFNGSVMPN-SEQLFRLNWA----SFSTGEKRAVENGPEL 752
++GY FV+F S A L NG ++PN + +LNWA S S V++G
Sbjct: 105 NQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNC 163
Query: 751 SIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 572
SIFVGDL+P+VT++ L ELF+ RY S AK+V D TG SKGYGFV+F + +E+ AL+
Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223
Query: 571 EMNGAYCSNRQMRVGVATPKRAVANQQQH 485
EM G + + R ++VG + QQQH
Sbjct: 224 EMQGVFLNGRAIKVG------PTSGQQQH 246
Score = 87 bits (215), Expect = 1e-016
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = -1
Query: 403 ESNNSTIFVGGIDPDVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQLANRKSADDAIQSL 224
+ NN+T+F+GG+ VTE++LR F FG +V VKIPVGK CGFVQ +R SA+ AI +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 223 NGTVIGKNTVRLSWGRS 173
G I + VRLSWGRS
Sbjct: 369 QGFPIANSRVRLSWGRS 385
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 77 bits (187), Expect = 3e-013
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Frame = -1
Query: 988 LHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVL----QNFNG-SVMPNSE 824
L + FS G+V V++I ++ + +S+G +VEF + + Q G ++ +
Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQAS 241
Query: 823 QLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDS 644
Q + A+ + ++ NG + ++VG L ++T+ +L+ +F E + + + ++ DS
Sbjct: 242 QAEKNRLAAMANNLQKG--NGGPMRLYVGSLHFNITEDMLRGIF-EPFGKIDNIVLMKDS 298
Query: 643 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQHHHPSQAL 464
+TGRSKGYGF+ F D RAL ++NG + R MRVG T + Q L
Sbjct: 299 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQEL 358
Query: 463 ILAGGHGANGYMAHGSQSDGESNNST 386
L G MA ++ G ST
Sbjct: 359 DLGSAGGRFQLMAKLAEGAGIQLPST 384
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 75 bits (184), Expect = 6e-013
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Frame = -1
Query: 988 LHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVL----QNFNGSVMPNSEQ 821
L FS G+V V++I ++ + +S+G +VEF+ ++ + Q G +
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQAS 228
Query: 820 LFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSN 641
N A+ + GP + ++VG L ++T+ +L+ +F E + ++S ++++DS
Sbjct: 229 QAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIF-EPFGRIESIQLMMDSE 286
Query: 640 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPK 512
TGRSKGYGF+ F D +AL ++NG + R M+VG T +
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 75 bits (184), Expect = 6e-013
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Frame = -1
Query: 988 LHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVL----QNFNGSVMPNSEQ 821
L FS G+V V++I ++ + +S G +VEF+ ++ + Q G +
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQAS 228
Query: 820 LFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSN 641
N A+ + GP + ++VG L ++T+ +L+ +F E + ++S ++++DS
Sbjct: 229 QAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIF-EPFGRIESIQLMMDSE 286
Query: 640 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPK 512
TGRSKGYGF+ F D +AL ++NG + R M+VG T +
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 75 bits (184), Expect = 6e-013
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Frame = -1
Query: 988 LHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRATAEEVL----QNFNGSVMPNSEQ 821
L FS G+V V++I ++ + +S+G +VEF+ ++ + Q G +
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQAS 228
Query: 820 LFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSN 641
N A+ + GP + ++VG L ++T+ +L+ +F E + ++S ++++DS
Sbjct: 229 QAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGIF-EPFGRIESIQLMMDSE 286
Query: 640 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPK 512
TGRSKGYGF+ F D +AL ++NG + R M+VG T +
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 74 bits (179), Expect = 2e-012
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
+ IF GDL +V D +L F RYPS AKVV D TG++KGYGFV F D N+ RA
Sbjct: 302 DFRIFCGDLGNEVNDDILARAF-SRYPSFLKAKVVRDKRTGKTKGYGFVSFKDPNDYVRA 360
Query: 577 LTEMNGAYCSNRQMRV 530
+ EMNG Y +R +++
Sbjct: 361 MREMNGRYVGSRPIKL 376
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 73 bits (177), Expect = 4e-012
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
+ IF GDL +V D +L F RYPS AKV+ D TG++KGYGFV F D N+ RA
Sbjct: 292 DFRIFCGDLGNEVNDDILARAF-SRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRA 350
Query: 577 LTEMNGAYCSNRQMRV 530
+ EMNG Y +R +++
Sbjct: 351 MREMNGKYVGSRPIKL 366
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 72 bits (174), Expect = 9e-012
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -1
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
+ IF GDL +V D +L F RYPS AKV+ D TG++KGYGFV F D N+ RA
Sbjct: 292 DFRIFCGDLGNEVNDDILARAF-SRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRA 350
Query: 577 LTEMNGAYCSNRQMRV 530
EMNG Y +R +++
Sbjct: 351 TREMNGKYVGSRPIKL 366
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 70 bits (169), Expect = 3e-011
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
+ IF GDL +V D +L F R+PS AKV+ D TG++KGYGFV F D ++ RA
Sbjct: 348 DFRIFCGDLGNEVNDDILARAF-SRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRA 406
Query: 577 LTEMNGAYCSNRQMRV 530
+ EMNG Y +R +++
Sbjct: 407 MREMNGKYVGSRPIKL 422
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 70 bits (169), Expect = 3e-011
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -1
Query: 757 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 578
+ IF GDL +V D +L F R+PS AKV+ D TG++KGYGFV F D ++ RA
Sbjct: 380 DFRIFCGDLGNEVNDDILARAF-SRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRA 438
Query: 577 LTEMNGAYCSNRQMRV 530
+ EMNG Y +R +++
Sbjct: 439 MREMNGKYVGSRPIKL 454
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,698,637,428
Number of Sequences: 518415
Number of Extensions: 148698637428
Number of Successful Extensions: 919591668
Number of sequences better than 0.0: 0
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