BLASTX 7.6.2
Query= UN38448 /QuerySize=1086
(1085 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis tha... 465 7e-129
gi|297797940|ref|XP_002866854.1| shikimate kinase family protein... 455 6e-126
gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate ... 418 1e-114
gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT... 388 1e-105
gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thali... 379 4e-103
gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor ... 377 2e-102
gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana] 377 2e-102
gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis t... 375 1e-101
gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabid... 374 2e-101
gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [A... 362 5e-098
gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis... 339 8e-091
gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis t... 332 8e-089
gi|225438559|ref|XP_002279932.1| PREDICTED: hypothetical protein... 298 2e-078
gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera] 298 2e-078
gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylv... 297 4e-078
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase,... 278 1e-072
gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trich... 267 4e-069
gi|255646624|gb|ACU23786.1| unknown [Glycine max] 263 6e-068
gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trich... 253 3e-065
gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japo... 253 6e-065
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 465 bits (1195), Expect = 7e-129
Identities = 249/298 (83%), Positives = 267/298 (89%), Gaps = 7/298 (2%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKPRGSLRYSQLGRIKENKRL-IVHLKPDKRRDLRQRS 856
MEA VQRF YS+ D RNFEGKPRGSLRY+ RIKE+KR +V L DKRRD R RS
Sbjct: 1 MEAATVQRFQYSS-WNDLRNFEGKPRGSLRYN-TQRIKEDKRFRVVALTLDKRRDHRLRS 58
Query: 855 VSDKNSSALLETGNILHSPFDEE-LVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM 679
VSDKNSSALLETG++LHSPFDEE +LK+KAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM
Sbjct: 59 VSDKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM 118
Query: 678 ARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG 499
AR+LGY+FF CDTLIE+AM GTSV EIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG
Sbjct: 119 ARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG 178
Query: 498 GAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLS 319
GAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT SRPLLHDD+S GD YT ALNRLS
Sbjct: 179 GAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES-GDTYTAALNRLS 237
Query: 318 TIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEEDCMA 145
TIW+ARGEAYT ASARVSLENIT K+GYR+VSDLTPAEIAIEAFEQVQ +L++ED MA
Sbjct: 238 TIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 295
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 299
Score = 455 bits (1170), Expect = 6e-126
Identities = 243/298 (81%), Positives = 267/298 (89%), Gaps = 8/298 (2%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKPRGSLRYSQLGRIKENKRL-IVHLKPDKRRDLRQRS 856
MEA VQ F YS+ D RNFEGK RGSLRY+Q R KE+KRL +V L DKRRD RQRS
Sbjct: 1 MEAATVQMFQYSS-WTDLRNFEGKTRGSLRYTQ--RTKEDKRLRVVALALDKRRDHRQRS 57
Query: 855 VSDKNSSALLETGNILHSPFDEE-LVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM 679
VSDKNSSALL+TG++LHSPFDEE +L++KAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM
Sbjct: 58 VSDKNSSALLDTGSLLHSPFDEEQQLLQKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIM 117
Query: 678 ARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG 499
ARALGY+FF CDTLIE+AMNGTSV EIFEHFGESVFREKETEALKKLSLMY+QVVVSTGG
Sbjct: 118 ARALGYTFFDCDTLIEQAMNGTSVAEIFEHFGESVFREKETEALKKLSLMYNQVVVSTGG 177
Query: 498 GAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLS 319
GAVIRPINWKYMHKGISIWLDVPL+ALA RIAAVGT SRPLLHDD+S GD YT ALNRLS
Sbjct: 178 GAVIRPINWKYMHKGISIWLDVPLKALAHRIAAVGTGSRPLLHDDES-GDTYTAALNRLS 236
Query: 318 TIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEEDCMA 145
TIW+ARGEAYTNASARVSLE++T K+GYR+VSDLTP EIA+EAFEQV+ +L +ED MA
Sbjct: 237 TIWDARGEAYTNASARVSLESMTLKLGYRSVSDLTPTEIAMEAFEQVRSYLDKEDGMA 294
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From
Arabidopsis Thaliana (Atsk2)
Length = 250
Score = 418 bits (1073), Expect = 1e-114
Identities = 213/243 (87%), Positives = 228/243 (93%), Gaps = 2/243 (0%)
Frame = -3
Query: 870 LRQRSVSDKNSSALLETGNILHSPFDEE-LVLKRKAEEVKPYLNGRSMYLVGMMGSGKTT 694
+R RSVSDKNSSALLETG++LHSPFDEE +LK+KAEEVKPYLNGRSMYLVGMMGSGKTT
Sbjct: 4 MRLRSVSDKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTT 63
Query: 693 VGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVV 514
VGKIMAR+LGY+FF CDTLIE+AM GTSV EIFEHFGESVFREKETEALKKLSLMYHQVV
Sbjct: 64 VGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVV 123
Query: 513 VSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVA 334
VSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT SRPLLHDD+S GD YT A
Sbjct: 124 VSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES-GDTYTAA 182
Query: 333 LNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEED 154
LNRLSTIW+ARGEAYT ASARVSLENIT K+GYR+VSDLTPAEIAIEAFEQVQ +L++ED
Sbjct: 183 LNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKED 242
Query: 153 CMA 145
MA
Sbjct: 243 GMA 245
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039
[Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 388 bits (995), Expect = 1e-105
Identities = 214/306 (69%), Positives = 244/306 (79%), Gaps = 21/306 (6%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +DWR FEGK RGSLRYSQ R+KE KR + HL+P++R+
Sbjct: 1 MEAAIAQRIQYPS-WVDWREFEGKSLRGSLRYSQ--RVKEEKRFRGLALAHLQPERRKRS 57
Query: 867 RQRSV--SDKNSSALLETGNILHSPFDEELVLK----RKAEEVKPYLNGRSMYLVGMMGS 706
V SD NSSALLE G++ PFDE+L+LK RKAEEVKP+LNGRSMYLVGMMGS
Sbjct: 58 VSSEVLCSDNNSSALLEAGSVY--PFDEDLILKATLQRKAEEVKPFLNGRSMYLVGMMGS 115
Query: 705 GKTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMY 526
GKTTVGK+M++ LGYSFF CD+LIE+AMNGTSV EIF H GE+ FR KET+ALKKLS MY
Sbjct: 116 GKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSMY 175
Query: 525 HQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDP 346
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT SRPLLHD+ GD
Sbjct: 176 -QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDE--SGDA 232
Query: 345 YTVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFL 166
Y+VA RLSTIW+ RGEAY NA+ARVSLENI +K GY++VSDLTP EIAIEAFEQV FL
Sbjct: 233 YSVAFKRLSTIWDERGEAYANANARVSLENIAAKRGYKDVSDLTPTEIAIEAFEQVLSFL 292
Query: 165 KEEDCM 148
++E+ M
Sbjct: 293 EKEETM 298
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 379 bits (973), Expect = 4e-103
Identities = 211/305 (69%), Positives = 243/305 (79%), Gaps = 21/305 (6%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSG 703
R+ S SD NSSALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGSG
Sbjct: 58 RRAVSPAVSCSDNNSSALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSG 114
Query: 702 KTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYH 523
KTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 KTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY- 173
Query: 522 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPY 343
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ GD Y
Sbjct: 174 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGDAY 231
Query: 342 TVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLK 163
+VA RLS IW+ RGEAYTNA+ARVSLENI +K GY+NVSDLTP EIAIEAFEQV FL+
Sbjct: 232 SVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLE 291
Query: 162 EEDCM 148
+E+ M
Sbjct: 292 KEETM 296
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis
thaliana]
Length = 303
Score = 377 bits (968), Expect = 2e-102
Identities = 210/305 (68%), Positives = 243/305 (79%), Gaps = 21/305 (6%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSG 703
R+ S SD NSSALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGSG
Sbjct: 58 RRAVSPAVSCSDNNSSALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSG 114
Query: 702 KTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYH 523
KTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 KTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY- 173
Query: 522 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPY 343
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ G+ Y
Sbjct: 174 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGNAY 231
Query: 342 TVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLK 163
+VA RLS IW+ RGEAYTNA+ARVSLENI +K GY+NVSDLTP EIAIEAFEQV FL+
Sbjct: 232 SVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLE 291
Query: 162 EEDCM 148
+E+ M
Sbjct: 292 KEETM 296
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 377 bits (968), Expect = 2e-102
Identities = 210/305 (68%), Positives = 243/305 (79%), Gaps = 21/305 (6%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSG 703
R+ S SD NSSALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGSG
Sbjct: 58 RRAVSPAVSCSDNNSSALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSG 114
Query: 702 KTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYH 523
KTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 KTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY- 173
Query: 522 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPY 343
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ GD Y
Sbjct: 174 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGDAY 231
Query: 342 TVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLK 163
+VA RLS IW+ RGEAYTNA+ARVSLENI +K GY++VSDLTP EIAIEAFEQV FL+
Sbjct: 232 SVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKDVSDLTPTEIAIEAFEQVLSFLE 291
Query: 162 EEDCM 148
+E+ M
Sbjct: 292 KEETM 296
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 375 bits (961), Expect = 1e-101
Identities = 211/306 (68%), Positives = 243/306 (79%), Gaps = 22/306 (7%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSS-ALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGS 706
R+ S SD NSS ALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGS
Sbjct: 58 RRAVSPAVSCSDNNSSGALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGS 114
Query: 705 GKTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMY 526
GKTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 GKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY 174
Query: 525 HQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDP 346
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ GD
Sbjct: 175 -QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGDA 231
Query: 345 YTVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFL 166
Y+VA RLS IW+ RGEAYTNA+ARVSLENI +K GY+NVSDLTP EIAIEAFEQV FL
Sbjct: 232 YSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFL 291
Query: 165 KEEDCM 148
++E+ M
Sbjct: 292 EKEETM 297
>gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabidopsis
thaliana]
Length = 305
Score = 374 bits (959), Expect = 2e-101
Identities = 216/312 (69%), Positives = 237/312 (75%), Gaps = 30/312 (9%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKPRGSLRYSQLGRIKENKRL-IVHLKPDKRRDLRQRS 856
MEA VQRF YS+ D RNFEGKPRGSLRY+ RIKE+KR +V L DKRRD R RS
Sbjct: 1 MEAATVQRFQYSS-WNDLRNFEGKPRGSLRYN-TQRIKEDKRFRVVALTLDKRRDHRLRS 58
Query: 855 VSDKNSSALLETGNILHSPFDEELVLKRKAEEV---KPYLNGRSMYLVGMMGSGKTTVGK 685
VSDKNSSALLETG++LHSPFDEE + + + + + L S LV V +
Sbjct: 59 VSDKNSSALLETGSLLHSPFDEEQQILKAMDYISFCRKKLKSFSCILV---------VEQ 109
Query: 684 IMARALGYSFF------------GCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKK 541
+ Y F CDTLIE+AM GTSV EIFEHFGESVFREKETEALKK
Sbjct: 110 FPRECVRYDGFRENDCREDYGKIACDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKK 169
Query: 540 LSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQ 361
LSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT SRPLLHDD+
Sbjct: 170 LSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDE 229
Query: 360 SGGDPYTVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQ 181
S GD YT ALNRLSTIW+ARGEAYT ASARVSLENIT K+GYR+VSDLTPAEIAIEAFEQ
Sbjct: 230 S-GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQ 288
Query: 180 VQCFLKEEDCMA 145
VQ +L++ED MA
Sbjct: 289 VQSYLEKEDGMA 300
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis
thaliana]
Length = 292
Score = 362 bits (929), Expect = 5e-098
Identities = 202/290 (69%), Positives = 231/290 (79%), Gaps = 21/290 (7%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSG 703
R+ S SD NSSALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGSG
Sbjct: 58 RRAVSPAVSCSDNNSSALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSG 114
Query: 702 KTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYH 523
KTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 KTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY- 173
Query: 522 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPY 343
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ GD Y
Sbjct: 174 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGDAY 231
Query: 342 TVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIE 193
+VA RLS IW+ RGEAYTNA+ARVSLENI +K GY+NVSDLTP EIAIE
Sbjct: 232 SVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIE 281
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 339 bits (867), Expect = 8e-091
Identities = 172/201 (85%), Positives = 184/201 (91%), Gaps = 1/201 (0%)
Frame = -3
Query: 747 LNGRSMYLVGMMGSGKTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFR 568
LN + +GMMGSGKTTVGKIMAR+LGY+FF CDTLIE+AM GTSV EIFEHFGESVFR
Sbjct: 104 LNSFLVNALGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFR 163
Query: 567 EKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTN 388
EKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT
Sbjct: 164 EKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTG 223
Query: 387 SRPLLHDDQSGGDPYTVALNRLSTIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPA 208
SRPLLHDD+S GD YT ALNRLSTIW+ARGEAYT ASARVSLENIT K+GYR+VSDLTPA
Sbjct: 224 SRPLLHDDES-GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPA 282
Query: 207 EIAIEAFEQVQCFLKEEDCMA 145
EIAIEAFEQVQ +L++ED MA
Sbjct: 283 EIAIEAFEQVQSYLEKEDGMA 303
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 332 bits (850), Expect = 8e-089
Identities = 186/272 (68%), Positives = 216/272 (79%), Gaps = 21/272 (7%)
Frame = -3
Query: 1026 MEA--VQRFHYSAPCIDWRNFEGKP-RGSLRYSQLGRIKENKRL----IVHLKPDKRRDL 868
MEA QR Y + +D R E KP RGSLRYSQ ++K ++R + L+P++R D
Sbjct: 1 MEAAITQRIQYPS-WVDCRKVECKPQRGSLRYSQ--QVKVDRRFRGLSLARLQPERRNDQ 57
Query: 867 RQR-----SVSDKNSSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSG 703
R+ S SD NSSALLETG++ PFDE+ +LKRKAEEVKPYLNGRSMYLVGMMGSG
Sbjct: 58 RRAVSPAVSCSDNNSSALLETGSVY--PFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSG 114
Query: 702 KTTVGKIMARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYH 523
KTTVGK+M++ LGY+FF CDTLIE+AMNGTSV EIF H GE+ FR KET+ALKKLS Y
Sbjct: 115 KTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRY- 173
Query: 522 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPY 343
QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALA RIAAVGT+SRPLLHD+ GD Y
Sbjct: 174 QVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDE--SGDAY 231
Query: 342 TVALNRLSTIWEARGEAYTNASARVSLENITS 247
+VA RLS IW+ RGEAYTNA+ARVSLE+++S
Sbjct: 232 SVAFKRLSAIWDERGEAYTNANARVSLESMSS 263
>gi|225438559|ref|XP_002279932.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 301
Score = 298 bits (761), Expect = 2e-078
Identities = 160/294 (54%), Positives = 209/294 (71%), Gaps = 11/294 (3%)
Frame = -3
Query: 1011 RFHYSAPCIDWRNFEGKPRGSLRYSQLGRIKENKRLIVHLKPDKRRDLRQRSVSDKNSS- 835
+ +SA CID F +P SL +SQ R + + H +P + + ++ + + S
Sbjct: 8 KMQFSA-CIDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSY 66
Query: 834 -----ALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARA 670
+LE+G+ S DE L+LK K++E+ PY++GR +YLVGMMGSGKTT+GKI++
Sbjct: 67 RNFPAPILESGSFPPS-LDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEV 125
Query: 669 LGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAV 490
LGYSF DTL+E A+ GTSV EIF +GE FR KE+E L+KLSL +H +VVSTGGGAV
Sbjct: 126 LGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH-MVVSTGGGAV 184
Query: 489 IRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIW 310
IRPINWKYM KGIS+WLDVPLEALA+RI+AVGTNSRPLLH D GD Y L RLS +W
Sbjct: 185 IRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHD--SGDAYNRTLTRLSNLW 242
Query: 309 EARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEEDCM 148
+ RG+AY NA+ARVSLE I +K+G+R+V++LTP IAIEA Q++ FLK E+ M
Sbjct: 243 KERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKGENGM 296
>gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera]
Length = 300
Score = 298 bits (761), Expect = 2e-078
Identities = 160/294 (54%), Positives = 209/294 (71%), Gaps = 11/294 (3%)
Frame = -3
Query: 1011 RFHYSAPCIDWRNFEGKPRGSLRYSQLGRIKENKRLIVHLKPDKRRDLRQRSVSDKNSS- 835
+ +SA CID F +P SL +SQ R + + H +P + + ++ + + S
Sbjct: 8 KMQFSA-CIDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSY 66
Query: 834 -----ALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARA 670
+LE+G+ S DE L+LK K++E+ PY++GR +YLVGMMGSGKTT+GKI++
Sbjct: 67 RNFPAPILESGSFPPS-LDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEV 125
Query: 669 LGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAV 490
LGYSF DTL+E A+ GTSV EIF +GE FR KE+E L+KLSL +H +VVSTGGGAV
Sbjct: 126 LGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH-MVVSTGGGAV 184
Query: 489 IRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIW 310
IRPINWKYM KGIS+WLDVPLEALA+RI+AVGTNSRPLLH D GD Y L RLS +W
Sbjct: 185 IRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHD--SGDAYNRTLTRLSNLW 242
Query: 309 EARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEEDCM 148
+ RG+AY NA+ARVSLE I +K+G+R+V++LTP IAIEA Q++ FLK E+ M
Sbjct: 243 KERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKGENGM 296
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 297 bits (758), Expect = 4e-078
Identities = 149/236 (63%), Positives = 193/236 (81%), Gaps = 5/236 (2%)
Frame = -3
Query: 858 SVSDKN-SSALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKI 682
S S KN +++LE+G I H+PFD+ L+LK K++E++PYL+GR +YLVGMMGSGKTTVGK+
Sbjct: 66 SCSYKNFPASVLESGGI-HAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKV 124
Query: 681 MARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTG 502
+++ L Y+FF DTL+E+ ++ SV EIF +GE FR+KETE L+KLSLM H++VVSTG
Sbjct: 125 LSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLM-HRLVVSTG 183
Query: 501 GGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRL 322
GGAV+RPINWKYM KGIS+WLDVPLEALA+RIAAVGT SRPLLH D GD YT RL
Sbjct: 184 GGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHD--SGDAYTKTFMRL 241
Query: 321 STIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEED 154
+++ E R EAY NA+ARVSLE++ +K+G+R+VS+LTP IAIEA EQ++ FLKEE+
Sbjct: 242 TSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEEN 297
>gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic;
Flags: Precursor
Length = 300
Score = 278 bits (710), Expect = 1e-072
Identities = 155/276 (56%), Positives = 191/276 (69%), Gaps = 11/276 (3%)
Frame = -3
Query: 963 KPRGSLRYSQLGRIKENKRLIV--HLKPDK-----RRDLRQRSVSDKNSSALLETGNILH 805
KP G LR+S+ K R++V HL+P K RR + S S +N A +
Sbjct: 23 KPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRVQLKVSCSPQNVQASVLESGCFS 82
Query: 804 SPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYSFFGCDTLIEEA 625
+ DE LK KAEEV+ YL+GR +YLVGMMG GKTTVG+I+A LGYSFF CD LIE+A
Sbjct: 83 ASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQA 142
Query: 624 MNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISI 445
+ G +V EIFE GES FR+ ETE L KLSLM H++VVSTGGGAV+RPINW++MHKGIS+
Sbjct: 143 VGGITVAEIFELRGESFFRDNETEVLHKLSLM-HRLVVSTGGGAVVRPINWRHMHKGISV 201
Query: 444 WLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIWEARGEAYTNASARVS 265
WLDVPLEALA+RI GT SRPLLH++ GD Y L RL+T+ E RGE Y NASARVS
Sbjct: 202 WLDVPLEALAKRITTEGTKSRPLLHEE--SGDVYDTTLKRLTTLMETRGENYANASARVS 259
Query: 264 LENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEE 157
LENI K ++V +TPAEI +E Q++ FLK +
Sbjct: 260 LENIALK-REKDVCHITPAEITLEVLIQIENFLKTQ 294
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 267 bits (680), Expect = 4e-069
Identities = 142/228 (62%), Positives = 170/228 (74%), Gaps = 4/228 (1%)
Frame = -3
Query: 858 SVSDKNSSALLETGNILHSPFDEE-LVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKI 682
S S NS L F EE L+LK K++E++PYLNGR +YLVGMMGSGKTTVGKI
Sbjct: 66 SCSCNNSQVSTLESESLQDLFGEEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKI 125
Query: 681 MARALGYSFFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTG 502
++R++ YSF CD L+E+ + SV EIFE +GE FR+KETEAL+KLS+ H+ VVSTG
Sbjct: 126 LSRSIRYSFCDCDKLVEQDVGVPSVAEIFEIYGEDFFRDKETEALEKLSI-EHRFVVSTG 184
Query: 501 GGAVIRPINWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRL 322
GGAVIR NW YM KGIS+WLDVPLE LAQRIAAVGT SRPLL D GD Y A RL
Sbjct: 185 GGAVIRDENWIYMRKGISVWLDVPLEELAQRIAAVGTKSRPLL--DNESGDAYNTAFRRL 242
Query: 321 STIWEARGEAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQV 178
ST++E R +AY NA ARVSLENI +K+GY++VS +TPA IAIEA EQ+
Sbjct: 243 STLFEKRHKAYENAKARVSLENIAAKLGYKDVSSITPAMIAIEALEQI 290
>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
Length = 299
Score = 263 bits (670), Expect = 6e-068
Identities = 129/228 (56%), Positives = 177/228 (77%), Gaps = 4/228 (1%)
Frame = -3
Query: 837 SALLETGNILHSPFDEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYS 658
++ LE G+ HS +E+L+LK K++E++PYL+GR +YLVGMM SGKTTVG+I++ AL YS
Sbjct: 74 ASALEYGS-FHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMASGKTTVGRILSEALSYS 132
Query: 657 FFGCDTLIEEAMNGTSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPI 478
F+ D L+ + + G SVT+IF+H+GE FR KETE L+K+S+M H+ ++STGGGAV+RPI
Sbjct: 133 FYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKVSIM-HRHLISTGGGAVVRPI 191
Query: 477 NWKYMHKGISIWLDVPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIWEARG 298
+WKYM +GIS+WLDVP+E L QRI A GT+SRPLLH GGD YT + LS+++E R
Sbjct: 192 DWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLH--YEGGDAYTKTITHLSSLFEERS 249
Query: 297 EAYTNASARVSLENITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEED 154
EAY NA+ +VSLEN+ +K+G R+V DL+P IA+EA EQ++ FL ED
Sbjct: 250 EAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKGFLIGED 297
>gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 253 bits (646), Expect = 3e-065
Identities = 130/200 (65%), Positives = 162/200 (81%), Gaps = 3/200 (1%)
Frame = -3
Query: 795 DEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYSFFGCDTLIEEAMNG 616
DE L+LK K++E++PYLNGR +YLVGMMGSGKTTVGKI+++A+ YSF DTL+E+ +
Sbjct: 88 DEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSQAIHYSFCDSDTLVEKDVGV 147
Query: 615 TSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLD 436
TSV EIF+ +GE FR+KETEAL+KLSL H+ VVSTGGGAVI+ NW YM KGIS+WLD
Sbjct: 148 TSVAEIFQIYGEDFFRDKETEALEKLSL-EHRYVVSTGGGAVIQDENWTYMRKGISVWLD 206
Query: 435 VPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIWEARGEAYTNASARVSLEN 256
VPLE LAQRIAAVGT +RPLL D+ GD YT A RLS ++E R +AY NA+ARVSLEN
Sbjct: 207 VPLEELAQRIAAVGTKTRPLL--DREPGDAYTKAFRRLSALFEQRYKAYENANARVSLEN 264
Query: 255 ITSKIGYRNVSDLTPAEIAI 196
I +K+GY++VS++TP IAI
Sbjct: 265 IAAKLGYKDVSNITPPMIAI 284
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 253 bits (644), Expect = 6e-065
Identities = 132/213 (61%), Positives = 165/213 (77%), Gaps = 3/213 (1%)
Frame = -3
Query: 795 DEELVLKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARALGYSFFGCDTLIEEAMNG 616
DE LVLK+KAE+V PYLN R +YLVGMMGSGKTTVGKI+A LGYSFF D L+E+A+
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132
Query: 615 TSVTEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLD 436
+SV EIF+ E+ FR+ E+E L+ LS M H++VV+TGGGAVIRPINW YM KG +IWLD
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSM-HRLVVATGGGAVIRPINWSYMKKGSTIWLD 191
Query: 435 VPLEALAQRIAAVGTNSRPLLHDDQSGGDPYTVALNRLSTIWEARGEAYTNASARVSLEN 256
VPL+ALA+RIAAVGT SRPLLH Q GDPY A +L+ ++E R ++Y NA ARVSLE+
Sbjct: 192 VPLDALARRIAAVGTASRPLLH--QESGDPYAKAYAKLTALFEQRMDSYANADARVSLEH 249
Query: 255 ITSKIGYRNVSDLTPAEIAIEAFEQVQCFLKEE 157
I K G+ NV+ LTP+ IAIEA +++ FL E+
Sbjct: 250 IAVKQGHSNVTTLTPSAIAIEALLKMESFLTEK 282
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,281,875,611,404
Number of Sequences: 15229318
Number of Extensions: 4281875611404
Number of Successful Extensions: 1013544274
Number of sequences better than 0.0: 0
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