BLASTX 7.6.2
Query= UN38503 /QuerySize=1077
(1076 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297811333|ref|XP_002873550.1| hypothetical protein ARALYDRAFT... 441 9e-122
gi|15239879|ref|NP_196773.1| Ubiquitin-associated/translation el... 435 8e-120
gi|297822273|ref|XP_002879019.1| ubiquitin-associated /TS-N doma... 86 7e-015
gi|255569177|ref|XP_002525557.1| conserved hypothetical protein ... 77 3e-012
gi|224104549|ref|XP_002313475.1| predicted protein [Populus tric... 70 4e-010
gi|15225819|ref|NP_180260.1| Ubiquitin-associated/translation el... 67 4e-009
gi|224058920|ref|XP_002299651.1| predicted protein [Populus tric... 67 6e-009
gi|255564442|ref|XP_002523217.1| conserved hypothetical protein ... 60 5e-007
>gi|297811333|ref|XP_002873550.1| hypothetical protein ARALYDRAFT_488055
[Arabidopsis lyrata subsp. lyrata]
Length = 611
Score = 441 bits (1134), Expect = 9e-122
Identities = 227/317 (71%), Positives = 258/317 (81%), Gaps = 16/317 (5%)
Frame = +1
Query: 13 AGGE--VERKNIGYPRGSSYISGESGNQSVNPMDKINMRMELMKMQQNAAIEEKKRMSYQ 186
AG E ++RKN+GYPRGSSYI+GES NQSVN +++I+M+++ MK+QQNA +EE KR+ YQ
Sbjct: 301 AGSEEALDRKNLGYPRGSSYINGESENQSVNSLERIHMKLQWMKLQQNATVEENKRIPYQ 360
Query: 187 PQPLQRPTEGPHYVAALGDHHFKRVQQQEMREPVTVM----QQQRSQSAKTNVLPVSTMN 354
PL R TE HYVAA GD +KR+QQQ+MREPV VM QQQRSQSA TNVLPVSTMN
Sbjct: 361 QTPLSRSTEETHYVAAQGD-QYKRLQQQDMREPVMVMQQQQQQQRSQSANTNVLPVSTMN 419
Query: 355 TSFTVAATAAAAAGGSGWYPANRSEVAQSNGYLPTRTLPPTDLNPNLMYQQQLQYQQYQG 534
SF T AAAA GSGWYPANRSE QSNGYLP+R+LPP DLN NLMY QQLQYQQYQG
Sbjct: 420 ASF----TGAAAAAGSGWYPANRSEAGQSNGYLPSRSLPPNDLNSNLMY-QQLQYQQYQG 474
Query: 535 QM-NNGHRMSGASSPHTVAPAAFLGLFSGYGS---TPSSGLEWSTDGSAAKSDYNNIDWS 702
Q+ NN HRM+GAS+P VAPAA LGLFSG+GS + SSGL+W+ DGS DYNNIDWS
Sbjct: 475 QVNNNSHRMAGASAPLAVAPAASLGLFSGFGSLAGSSSSGLDWNADGSLGHLDYNNIDWS 534
Query: 703 LDRGLACPRPNQQQYMEASPYETNMNGRTRMMGNGNGMSMAMGAQEAALVGNGREWTSPF 882
LD+GLACPRP+QQ +SPYE +MNGRTR + NGNGM MAMG QEAALVGNGREWTSPF
Sbjct: 535 LDKGLACPRPSQQYVAASSPYEAHMNGRTRTLANGNGMGMAMGVQEAALVGNGREWTSPF 594
Query: 883 EGKDLFSLSRQYVPPSL 933
EGKDLFSLSRQYVPPSL
Sbjct: 595 EGKDLFSLSRQYVPPSL 611
>gi|15239879|ref|NP_196773.1| Ubiquitin-associated/translation elongation factor
EF1B protein [Arabidopsis thaliana]
Length = 619
Score = 435 bits (1117), Expect = 8e-120
Identities = 228/320 (71%), Positives = 259/320 (80%), Gaps = 25/320 (7%)
Frame = +1
Query: 25 VERKNIGYPRGSSYISGESGNQSVNPMDKINMRMELMKMQQNAAIEEKKRMSYQPQPLQR 204
++RKN+GYPRGSSYISGES NQSVN +++I+M+++ MK+QQNA +EE KR+ YQ PL R
Sbjct: 308 LDRKNLGYPRGSSYISGESENQSVNSLERIHMKLQWMKLQQNAPLEENKRIPYQQTPLSR 367
Query: 205 PTEGPHYVAALGDHHFKRVQQQEMREPVTVM-----QQQRSQSAKTNVLPVSTMNTSFTV 369
TE HYV ALGD FKR+QQQ+MREPV VM QQQRSQSA TNVLPVSTMN SFT
Sbjct: 368 STEETHYVTALGD-QFKRLQQQDMREPVMVMQQQQQQQQRSQSANTNVLPVSTMNASFT- 425
Query: 370 AATAAAAAGGSGWYPANRSEVAQSNGYLPTRTLPPTDLNPNLMYQQQLQYQQYQGQM-NN 546
AAA GSGW+PANRSE AQSNGYLP+R+LPP DLN NLMY QQLQYQQYQGQ+ NN
Sbjct: 426 ----GAAAAGSGWHPANRSEAAQSNGYLPSRSLPPNDLNSNLMY-QQLQYQQYQGQVNNN 480
Query: 547 GHRMSGASSPHTVAPAAFLGLFSGYGS---TPSSGLEWSTDGSAAKSDYNNIDWSLDRGL 717
GHRM+G+S+P VAPAA LGLFSG+GS + SSGL+W+TDGS DYNNIDWSLD+GL
Sbjct: 481 GHRMAGSSAPPAVAPAASLGLFSGFGSLAGSSSSGLDWNTDGSLGHLDYNNIDWSLDKGL 540
Query: 718 ACPRPNQQQYMEA--------SPYETNMNGRTRMMGNGNGMSMAMGAQEAALVGNGREWT 873
AC RP+ QQY+ A SPYE +MNGRTRMM NGNGM +AMG QEAALVGNGREWT
Sbjct: 541 ACVRPS-QQYVAASSPYSAASSPYEAHMNGRTRMMTNGNGMGVAMGVQEAALVGNGREWT 599
Query: 874 SPFEGKDLFSLSRQYVPPSL 933
SPFEGKDLFSLSRQYVPPSL
Sbjct: 600 SPFEGKDLFSLSRQYVPPSL 619
>gi|297822273|ref|XP_002879019.1| ubiquitin-associated /TS-N domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 641
Score = 86 bits (212), Expect = 7e-015
Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 24/149 (16%)
Frame = +1
Query: 541 NNGHRMSGASSPHTVAPAAFLGLFSGYGSTPSSG----LEWSTDGSAAKSDYNNIDWSLD 708
N G +S ++ A+ LGLFS GS +SG ++W + GS DY +IDWSLD
Sbjct: 499 NGGSWTRNTASSPPISAASSLGLFSAVGSAGTSGASSPVDWISGGSV---DYTSIDWSLD 555
Query: 709 RGLACPRPNQQQYMEASP-YETNM-------------NGRTRMMGNGNGMSMAMGAQEAA 846
+GL+ N +S Y+ NM N + G+S+ + Q+AA
Sbjct: 556 QGLSQNSRNWSGSKSSSHIYDANMSRYSPNGSMGGRVNNSNSVSMENAGLSVVVETQQAA 615
Query: 847 LVGNGREWTSPFEGKDLFSLSRQYVPPSL 933
++WTSPFEGKD+FSLSRQYV PSL
Sbjct: 616 ---TSQDWTSPFEGKDIFSLSRQYVSPSL 641
>gi|255569177|ref|XP_002525557.1| conserved hypothetical protein [Ricinus
communis]
Length = 626
Score = 77 bits (189), Expect = 3e-012
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Frame = +1
Query: 556 MSGASSPHTVAPAAFLGLFSGYGSTPSSG---LEWSTDGSAAKSDYNNIDWSLDRGLACP 726
++ SSP AP++ LGLF+G GS+ + G ++W+ GS + DY +IDW+LD L+
Sbjct: 497 IASVSSPSLAAPSS-LGLFTGVGSSGTLGTSHVDWNNGGSMPEFDYTSIDWTLDTNLSSS 555
Query: 727 RPNQQQYMEASPYETNMNG-RTRMMGNG--NGMSMAMGAQEAALVGNGREWTSPFEGKDL 897
+ + ++ S ++ +G R M + +G+ A A+E A REWTSPF GKD+
Sbjct: 556 K--RGLWLGLSSLLSDRSGARMNSMNSSCISGLREAGAAKEMASSVGLREWTSPFAGKDI 613
Query: 898 FSLSRQYV 921
FSL RQ+V
Sbjct: 614 FSLPRQFV 621
>gi|224104549|ref|XP_002313475.1| predicted protein [Populus trichocarpa]
Length = 656
Score = 70 bits (171), Expect = 4e-010
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
Frame = +1
Query: 559 SGASSPHTVAPAAFLGLFSGYGSTPSSG----LEWSTDGSAAKSDYNNIDWSLDRGLACP 726
S A + ++A A+ LGLFSG GST SSG ++WST GS A+ DY +IDWSLDRGL+ P
Sbjct: 502 SRAGASPSLAAASSLGLFSGLGSTGSSGASSPVDWSTSGSMAQLDYTSIDWSLDRGLSSP 561
Query: 727 RP 732
RP
Sbjct: 562 RP 563
>gi|15225819|ref|NP_180260.1| Ubiquitin-associated/translation elongation factor
EF1B protein [Arabidopsis thaliana]
Length = 646
Score = 67 bits (162), Expect = 4e-009
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Frame = +1
Query: 559 SGASSPHTVAPAAFLGLFSGYGSTPSSGLEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQ 738
S S T ++ + SG GS + ++WS D S +++ N +WS GL
Sbjct: 525 SAVGSAGTSGASSPIDWISG-GSVDYTNIDWSLDQSLSQNSRVNGNWS---GLKSSSQIY 580
Query: 739 QQYMEASPYETNMNGRTRMMGNGNGMSMAMGAQ----EAALVGNGREWTSPFEGKDLFSL 906
+ M +M GR + N NG+SM E +WTSPFEGKD+FSL
Sbjct: 581 DENMNRYSLNGSMGGR---LNNSNGVSMENSGAGVIVETQQAATSPDWTSPFEGKDIFSL 637
Query: 907 SRQYVPPSL 933
SRQYV PSL
Sbjct: 638 SRQYVSPSL 646
>gi|224058920|ref|XP_002299651.1| predicted protein [Populus trichocarpa]
Length = 652
Score = 67 bits (161), Expect = 6e-009
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Frame = +1
Query: 559 SGASSPHTVAPAAFLGLFSGYGSTPSSG----LEWSTDGSAAKSDYNNIDWSLDRGLACP 726
S A + ++A A+ LGLFSG GST SSG ++WST GS + DY +IDWSL+RGL+ P
Sbjct: 507 SRAGASPSLAAASSLGLFSGLGSTGSSGATSPVDWSTSGSMEQLDYTSIDWSLNRGLSSP 566
Query: 727 RP 732
RP
Sbjct: 567 RP 568
>gi|255564442|ref|XP_002523217.1| conserved hypothetical protein [Ricinus
communis]
Length = 663
Score = 60 bits (144), Expect = 5e-007
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Frame = +1
Query: 580 TVAPAAFLGLFSGYG-----STPSSGLEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQQQ 744
T+A A+ LGLFSG G S +S ++WST GS A+ DY +IDWSLDRGL+ P N
Sbjct: 524 TLAAASSLGLFSGLGGLAGSSGATSPVDWSTAGSMAQLDYTSIDWSLDRGLSSPSHNGLW 583
Query: 745 YMEASPYETNMNGRTRMMGNGNGMSMAMGAQEAALVGNG 861
S + T+M + A A GNG
Sbjct: 584 LGSGS-----LKNNTQMYDSSTSALGAKLTMRTAASGNG 617
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,281,875,611,404
Number of Sequences: 15229318
Number of Extensions: 4281875611404
Number of Successful Extensions: 1013544274
Number of sequences better than 0.0: 0
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