BLASTX 7.6.2
Query= UN38584 /QuerySize=1068
(1067 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G67140.1 | Symbols: | F-box family protein | ... 386 2e-107
TAIR9_protein||AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BI... 68 1e-011
TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological... 66 4e-011
TAIR9_protein||AT5G25350.1 | Symbols: EBF2 | EBF2 (EIN3-BINDING ... 57 2e-008
TAIR9_protein||AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; u... 56 3e-008
TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (F... 56 3e-008
TAIR9_protein||AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:74974... 55 7e-008
TAIR9_protein||AT1G80630.1 | Symbols: | leucine-rich repeat fam... 48 8e-006
>TAIR9_protein||AT5G67140.1 | Symbols: | F-box family protein |
chr5:26794009-26795213 REVERSE
Length = 229
Score = 386 bits (990), Expect = 2e-107
Identities = 184/203 (90%), Positives = 195/203 (96%)
Frame = -1
Query: 689 VFYRASGVCKKWRKAVNQSMARRESLSFAGWKMDDASTSRLVHLAYNLRELDISRSRWGC 510
V +ASGVCKKWRKAVNQSMARRE+LSFAGWKMDD STSRLVHLA+NL+ELDISRSRWGC
Sbjct: 27 VLAQASGVCKKWRKAVNQSMARRETLSFAGWKMDDDSTSRLVHLAFNLKELDISRSRWGC 86
Query: 509 HVTDNGLYQIASARCVANLTSISLWGMTAITDSGVVQLVSRTSSLQHLNIGGTFITDESL 330
H+TDNGLYQIASARCV+NL S+SLWGMTAITDSGVVQL+SRTSSLQHLNIGGTFITDESL
Sbjct: 87 HITDNGLYQIASARCVSNLNSVSLWGMTAITDSGVVQLISRTSSLQHLNIGGTFITDESL 146
Query: 329 FAIAERCHHLKTISMWCCRHVTERGLLALVNKCRKLESLNLWGTRVPVDCFIALLTISPA 150
FAIAERCH LKTI MWCCRHVTERGLL LVNKCRKLES+NLWGTRVPVDCFIALLTISPA
Sbjct: 147 FAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLTISPA 206
Query: 149 LQIKPIQLLLNAQNPPPLLHAV* 81
LQIKP++LLLNAQNPPPLLHAV*
Sbjct: 207 LQIKPMELLLNAQNPPPLLHAV* 229
Score = 53 bits (126), Expect = 3e-007
Identities = 27/30 (90%)
Frame = -1
Query: 842 MDEEAAIDRLPLHLLAYIFSLVTSFTELAQ 753
MDEEAAIDRLPL LLAYIFSL TSFT LAQ
Sbjct: 1 MDEEAAIDRLPLDLLAYIFSLATSFTVLAQ 30
>TAIR9_protein||AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX
PROTEIN 1); protein binding / ubiquitin-protein ligase |
chr2:10848018-10850275 REVERSE
Length = 629
Score = 68 bits (164), Expect = 1e-011
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Frame = -1
Query: 506 VTDNGLYQIASARCVANLTSISLWGMTAITDSGVVQLVSRTSSLQHLNIGG-TFITDESL 330
V+D GL I R +L S+SLW ++ ITD+G++++ + L+ L + + ITD+ L
Sbjct: 164 VSDLGLRSI--GRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGL 221
Query: 329 FAIAERCHHLKTISMWCCRHVTERGLLALVNKCRKLESLNLWGTRVPVDCFIALLTISPA 150
AIA+ C +L +++ C + + GLLA+ C KL+S+++ + D IA L +
Sbjct: 222 VAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTT 281
Query: 149 LQIKPIQL 126
+ ++L
Sbjct: 282 CSLAKLKL 289
>TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box
family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545
proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575;
Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159
(source: NCBI BLink). | chr5:7856314-7857983 FORWARD
Length = 406
Score = 66 bits (159), Expect = 4e-011
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = -1
Query: 506 VTDNGLYQIASARCVANLTSISLWGMTAITDSGVVQLVSRTSSLQHLNIGG-TFITDESL 330
+TD GL I RC++ L + + ++D G+ + L+ L++ G FITDESL
Sbjct: 111 ITDTGLASI--GRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESL 168
Query: 329 FAIAERCHHLKTISMWCCRHVTERGLLALVNKCRKLESLNLWGTRVPVDCFIALLTISPA 150
+++ERC L+ + + C ++T+ GL LV CRK++SL++ D ++ + + A
Sbjct: 169 KSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACA 228
Query: 149 LQIKPIQLL 123
+K ++LL
Sbjct: 229 SSLKTLKLL 237
>TAIR9_protein||AT5G25350.1 | Symbols: EBF2 | EBF2 (EIN3-BINDING F BOX PROTEIN
2); protein binding | chr5:8794842-8796882 REVERSE
Length = 624
Score = 57 bits (136), Expect = 2e-008
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -1
Query: 548 LRELDISRSRWGCHVTDNGLYQIASARCVANLTSISLWGMTAITDSGVVQLVSRTSSLQH 369
L +L I S + VTD GL +A +L +SLW + A++D G+ ++ ++
Sbjct: 140 LGKLQIRGSGFESKVTDVGLGAVAHG--CPSLRIVSLWNLPAVSDLGLSEIARSCPMIEK 197
Query: 368 LNIGG-TFITDESLFAIAERCHHLKTISMWCCRHVTERGLLALVNKCRKLESLNL 207
L++ ITD L AIAE C +L +++ C V GL A+ +C L S+++
Sbjct: 198 LDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISI 252
>TAIR9_protein||AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B;
ubiquitin-protein ligase | chr1:28940888-28942401 FORWARD
Length = 361
Score = 56 bits (134), Expect = 3e-008
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Frame = -1
Query: 581 STSRLVHLAYNLRELDISRSRWGC--HVTDNGLYQIASARCVANLTSISLWGMTAITDSG 408
S + L HL R+L I + GC V+DN L Q C L S++L I+D G
Sbjct: 157 SDTALAHLTRFCRKLKI-LNLCGCVEAVSDNTL-QAIGENC-NQLQSLNLGWCENISDDG 213
Query: 407 VVQLVSRTSSLQHLNI-GGTFITDESLFAIAERCHHLKTISMWCCRHVTERGLLAL 243
V+ L L+ L++ ITDES+ A+A RC HL+++ ++ CR++T+R + +L
Sbjct: 214 VMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSL 269
>TAIR9_protein||AT5G01720.1 | Symbols: | F-box family protein (FBL3) |
chr5:267118-270391 REVERSE
Length = 666
Score = 56 bits (134), Expect = 3e-008
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Frame = -1
Query: 551 NLRELDISRSRWGCHVTDNGLYQIASARCVANLTSISLWGMTAITDSGVVQLVSRTSSLQ 372
NLRELD+ RS +TD G+ IA C+ +L +I++ ITD +V L S+ S LQ
Sbjct: 458 NLRELDLYRS---VGITDVGISTIAQG-CI-HLETINISYCQDITDKSLVSL-SKCSLLQ 511
Query: 371 HLNIGG-TFITDESLFAIAERCHHLKTISMWCCRHVTERGLLALVNKCRKLESLNLWGTR 195
G IT + L AIA RC L + + C + + GLLAL + + L+ +N+ T
Sbjct: 512 TFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTA 571
Query: 194 VPVDCFIALLTI 159
V ++L I
Sbjct: 572 VTEVGLLSLANI 583
>TAIR9_protein||AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386
FORWARD
Length = 361
Score = 55 bits (131), Expect = 7e-008
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Frame = -1
Query: 587 DASTSRLVHLAYNLRELDISRSRWGC--HVTDNGLYQIASARCVANLTSISLWGMTAITD 414
D + + L L+ L++ GC VTDN L I + C + S++L I+D
Sbjct: 158 DTAIAYLTRFCRKLKVLNLC----GCVKAVTDNALEAIGN-NC-NQMQSLNLGWCENISD 211
Query: 413 SGVVQLVSRTSSLQHLNI-GGTFITDESLFAIAERCHHLKTISMWCCRHVTERGLLAL 243
GV+ L L+ L++ G ITDES+ A+A+ C HL+++ ++ CR++T+R + +L
Sbjct: 212 DGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSL 269
>TAIR9_protein||AT1G80630.1 | Symbols: | leucine-rich repeat family protein |
chr1:30308879-30310615 REVERSE
Length = 579
Score = 48 bits (113), Expect = 8e-006
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -1
Query: 422 ITDSGVVQLVSRTSSLQHLNI-GGTFITDESLFAIAERCHHLKTISMWCCRHVTERGLLA 246
++DSGV++L S L +NI G +FITD+SL A+++ C L+ I C ++ +
Sbjct: 150 VSDSGVIELSSNLKGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCIKF 209
Query: 245 LVNKCRKLESLNLWG 201
++ R LESL + G
Sbjct: 210 VLRNSRNLESLAING 224
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,355,950,256
Number of Sequences: 33410
Number of Extensions: 19355950256
Number of Successful Extensions: 615438801
Number of sequences better than 0.0: 0
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