BLASTX 7.6.2
Query= UN38594 /QuerySize=915
(914 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT... 440 2e-121
gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis... 434 1e-119
gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polyp... 430 2e-118
gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putati... 349 5e-094
gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas] 346 5e-093
gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Defor... 345 9e-093
gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus tr... 339 4e-091
gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein... 324 2e-086
gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deform... 320 2e-085
gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicag... 284 1e-074
gi|242046748|ref|XP_002461120.1| hypothetical protein SORBIDRAFT... 282 7e-074
gi|226510000|ref|NP_001140879.1| hypothetical protein LOC1002729... 282 9e-074
gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare ... 281 2e-073
gi|226729275|sp|B6RGY0.1|DEF1A_ORYSJ RecName: Full=Peptide defor... 280 2e-073
gi|116783457|gb|ABK22950.1| unknown [Picea sitchensis] 278 8e-073
gi|255629341|gb|ACU15015.1| unknown [Glycine max] 264 1e-068
gi|124359186|gb|ABD28402.2| Formylmethionine deformylase [Medica... 242 8e-062
gi|218188450|gb|EEC70877.1| hypothetical protein OsI_02402 [Oryz... 240 2e-061
gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula] 230 3e-058
gi|303281244|ref|XP_003059914.1| predicted protein [Micromonas p... 184 1e-044
>gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT_334826
[Arabidopsis lyrata subsp. lyrata]
Length = 270
Score = 440 bits (1130), Expect = 2e-121
Identities = 226/263 (85%), Positives = 242/263 (92%), Gaps = 6/263 (2%)
Frame = -1
Query: 899 TAMATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHL--SSSSSSFKTKAGW 735
TAM T+FR SLGLLPVSAA+TC SIRFPVSRP+S LNR LY+L SSSSSS TKAGW
Sbjct: 9 TAMGTLFRVSLGLLPVSAAVTCRSIRFPVSRPSSSHLLNRKLYNLPSSSSSSSLSTKAGW 68
Query: 734 LLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVG 555
LLGLG+ KKKKVDLP++VAAGDPVLHEKAREVDPEEIGSERIQKIIDDM+KVMRLAPGVG
Sbjct: 69 LLGLGE-KKKKVDLPEIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMIKVMRLAPGVG 127
Query: 554 LAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFE 375
LAAPQIGVPLRIIVLEDTKEYISYA KEE AQ+RR FDLMVMVNP LK S+KKALFFE
Sbjct: 128 LAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFE 187
Query: 374 GCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIP 195
GC+SV+GFRA VER+LEVVVTGYDRQGK+I+VNASGWQARILQHECDHLDG LYVDKM+P
Sbjct: 188 GCLSVNGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVP 247
Query: 194 RTFRTVDNLDLPLAEGCPKLGPQ 126
RTFRTVDNLDLPLAEGCPKLGPQ
Sbjct: 248 RTFRTVDNLDLPLAEGCPKLGPQ 270
>gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana]
Length = 269
Score = 434 bits (1114), Expect = 1e-119
Identities = 223/264 (84%), Positives = 240/264 (90%), Gaps = 5/264 (1%)
Frame = -1
Query: 905 QPTAMATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHL-SSSSSSFKTKAG 738
+ TAM T+FR SL LLPVSAA+TC SIRFPVSRP S LNR LY+L +SSSSS TKAG
Sbjct: 7 EATAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAG 66
Query: 737 WLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGV 558
WLLGLG+ KKKKVDLP++VA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGV
Sbjct: 67 WLLGLGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV 125
Query: 557 GLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFF 378
GLAAPQIGVPLRIIVLEDTKEYISYA KEE AQ+RR FDLMVMVNP LK S+KKALFF
Sbjct: 126 GLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFF 185
Query: 377 EGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMI 198
EGC+SVDGFRA VER+LEVVVTGYDRQGK+I+VNASGWQARILQHECDHLDG LYVDKM+
Sbjct: 186 EGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMV 245
Query: 197 PRTFRTVDNLDLPLAEGCPKLGPQ 126
PRTFRTVDNLDLPLAEGCPKLGPQ
Sbjct: 246 PRTFRTVDNLDLPLAEGCPKLGPQ 269
>gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide
Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis
thaliana]
Length = 259
Score = 430 bits (1104), Expect = 2e-118
Identities = 221/260 (85%), Positives = 237/260 (91%), Gaps = 5/260 (1%)
Frame = -1
Query: 893 MATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHL-SSSSSSFKTKAGWLLG 726
M T+FR SL LLPVSAA+TC SIRFPVSRP S LNR LY+L +SSSSS TKAGWLLG
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAGWLLG 60
Query: 725 LGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAA 546
LG+ KKKKVDLP++VA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGVGLAA
Sbjct: 61 LGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAA 119
Query: 545 PQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCV 366
PQIGVPLRIIVLEDTKEYISYA KEE AQ+RR FDLMVMVNP LK S+KKALFFEGC+
Sbjct: 120 PQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCL 179
Query: 365 SVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTF 186
SVDGFRA VER+LEVVVTGYDRQGK+I+VNASGWQARILQHECDHLDG LYVDKM+PRTF
Sbjct: 180 SVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTF 239
Query: 185 RTVDNLDLPLAEGCPKLGPQ 126
RTVDNLDLPLAEGCPKLGPQ
Sbjct: 240 RTVDNLDLPLAEGCPKLGPQ 259
>gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus
communis]
Length = 266
Score = 349 bits (894), Expect = 5e-094
Identities = 178/235 (75%), Positives = 198/235 (84%), Gaps = 4/235 (1%)
Frame = -1
Query: 824 RFPVSRPASLNRNLYHLS--SSSSSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEK 651
R P+S+P Y ++ S SSS KAGWLLGLG+N KK+ LPD+V AGDPVLHE
Sbjct: 34 RIPISKPDFRTTIPYSITRKSLSSSSIAKAGWLLGLGEN--KKMSLPDIVKAGDPVLHEP 91
Query: 650 AREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKE 471
AREVDP+EIGSERIQKIIDDMVKVMR APGVGLAAPQIGVPLRIIVLEDT EYI YA KE
Sbjct: 92 AREVDPDEIGSERIQKIIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKE 151
Query: 470 ETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGK 291
ET AQDRRPFDL+V++NP+LK ++ ALFFEGC+SVDGFRAVVER LEV V+G DR G+
Sbjct: 152 ETKAQDRRPFDLLVILNPKLKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQ 211
Query: 290 QIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLAEGCPKLGPQ 126
I+V+ASGWQARILQHECDHLDG LYVDKM+PRTFRTVDNLDLPLAEGCP LG Q
Sbjct: 212 PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNLDLPLAEGCPNLGAQ 266
>gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
Length = 274
Score = 346 bits (885), Expect = 5e-093
Identities = 173/234 (73%), Positives = 197/234 (84%), Gaps = 6/234 (2%)
Frame = -1
Query: 824 RFPVSRPASLNRN---LYHLSSSSSSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHE 654
R +S+P L+ N +H +S SSS KAGW LGLG+ KKK PD+V AGDPVLHE
Sbjct: 42 RMSISKPEFLSSNPKSTFH-NSFSSSLTAKAGWFLGLGE--KKKTSFPDIVKAGDPVLHE 98
Query: 653 KAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASK 474
AREVDPEEIGSERIQKIIDDM+K MR+APGVGLAAPQIGVPLRIIVLEDTKEYI YA K
Sbjct: 99 PAREVDPEEIGSERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPK 158
Query: 473 EETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQG 294
EET AQDRRPFDL+V++NP+L+ S++ A FFEGC+SVDGFRAVVER+L+V VTG R G
Sbjct: 159 EETKAQDRRPFDLLVILNPKLEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYG 218
Query: 293 KQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
+ I+VNASGWQARILQHECDHLDG LYVDKM+PRTFRT++NLDLPLAEGCP LG
Sbjct: 219 QPIKVNASGWQARILQHECDHLDGTLYVDKMVPRTFRTIENLDLPLAEGCPNLG 272
>gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Deformylase From
Arabidopsis Thaliana (Atpdf1a); Crystals Grown In Peg-5000 Mme As
Precipitant
Length = 197
Score = 345 bits (883), Expect = 9e-093
Identities = 169/196 (86%), Positives = 182/196 (92%)
Frame = -1
Query: 701 VDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 522
+DLP++VA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 1 MDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLR 60
Query: 521 IIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAV 342
IIVLEDTKEYISYA KEE AQ+RR FDLMVMVNP LK S+KKALFFEGC+SVDGFRA
Sbjct: 61 IIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAA 120
Query: 341 VERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDL 162
VER+LEVVVTGYDRQGK+I+VNASGWQARILQHECDHLDG LYVDKM+PRTFRTVDNLDL
Sbjct: 121 VERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDL 180
Query: 161 PLAEGCPKLGPQ*HRY 114
PLAEGCPKLG H +
Sbjct: 181 PLAEGCPKLGSHHHHH 196
>gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
Length = 299
Score = 339 bits (869), Expect = 4e-091
Identities = 170/233 (72%), Positives = 195/233 (83%), Gaps = 4/233 (1%)
Frame = -1
Query: 824 RFPVSRPASLNRNLYHLS--SSSSSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEK 651
R V +P +N N + + S SSS KAGWLLG+G+ KKK LPD+V AGDPVLHE
Sbjct: 67 RMLVPKPEFMNPNPHFTTRKSLSSSHTAKAGWLLGMGE--KKKTSLPDIVKAGDPVLHEP 124
Query: 650 AREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKE 471
AREVDP+EIGSERIQKIIDDMVKVMR+APGVGLAAPQIG+PLRIIVLEDT EYI YA K
Sbjct: 125 AREVDPKEIGSERIQKIIDDMVKVMRMAPGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKN 184
Query: 470 ETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGK 291
ET AQDRRPFDL+V+VNP+LK S++ A FFEGC+SVDGFRA+VERHL+V V G R G+
Sbjct: 185 ETKAQDRRPFDLLVIVNPKLKKKSNRTAFFFEGCLSVDGFRAIVERHLDVEVIGLSRDGQ 244
Query: 290 QIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
I+V+ASGWQARILQHECDHL+G LYVDKM+PRTFRTV+NLDLPLAEGCP+ G
Sbjct: 245 PIKVDASGWQARILQHECDHLEGTLYVDKMVPRTFRTVENLDLPLAEGCPEPG 297
>gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 324 bits (829), Expect = 2e-086
Identities = 159/220 (72%), Positives = 184/220 (83%), Gaps = 3/220 (1%)
Frame = -1
Query: 791 RNLYHLSSSSSSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSER 612
R Y SSSSS+ AGW+LGLGD KK LP++V AGDPVLHE A+EV+P EIGS+R
Sbjct: 59 RKTYRPSSSSSTLIASAGWILGLGD---KKPALPEIVKAGDPVLHESAQEVEPGEIGSDR 115
Query: 611 IQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLM 432
IQKIIDDM+K MR APGVGLAAPQIG+PLRIIVLEDTKEYISY K+ AQ+RRPFDL+
Sbjct: 116 IQKIIDDMIKAMRTAPGVGLAAPQIGIPLRIIVLEDTKEYISYDRKDVIKAQERRPFDLL 175
Query: 431 VMVNPELKASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARI 252
V++NP+L+ ++ A FFEGC+SVDGFRAVVERHL+V VTG R GK I+V+ASGW+ARI
Sbjct: 176 VILNPKLRKKGNRTAFFFEGCLSVDGFRAVVERHLQVEVTGLSRNGKPIKVDASGWKARI 235
Query: 251 LQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
LQHECDHLDG LYVDKM+PRTFRTV N+DLPLA GCPKLG
Sbjct: 236 LQHECDHLDGTLYVDKMVPRTFRTVQNIDLPLAVGCPKLG 275
>gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deformylase 1A,
chloroplastic; Short=PDF 1A; AltName: Full=Polypeptide deformylase;
Flags: Precursor
Length = 277
Score = 320 bits (819), Expect = 2e-085
Identities = 159/210 (75%), Positives = 181/210 (86%), Gaps = 2/210 (0%)
Frame = -1
Query: 761 SSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVK 582
SS +AGW LGLG+ KKK +PD+V AGDPVLHE ++++ EEIGSERIQKII++MVK
Sbjct: 68 SSATARAGWFLGLGE--KKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVK 125
Query: 581 VMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKAS 402
VMR APGVGLAAPQIG+PL+IIVLEDT EYISYA K+ET AQDRRPF L+V++NP+LK
Sbjct: 126 VMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVIINPKLKKK 185
Query: 401 SDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDG 222
+K ALFFEGC+SVDGFRAVVERHLEV VTG DR GK I+V+ASGWQARILQHE DHLDG
Sbjct: 186 GNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHLDG 245
Query: 221 YLYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
LYVDKM PRTFRTV+NLDLPLA GCPKLG
Sbjct: 246 TLYVDKMAPRTFRTVENLDLPLAAGCPKLG 275
>gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicago truncatula]
Length = 257
Score = 284 bits (726), Expect = 1e-074
Identities = 135/190 (71%), Positives = 165/190 (86%)
Frame = -1
Query: 695 LPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRII 516
LP +V AGDPV+HE AREVD EI S++IQ IIDDM+ VMR APGVG+AAPQIG+PLRII
Sbjct: 67 LPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRII 126
Query: 515 VLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVE 336
VLED +E+I Y ++EET AQDRRPFDL+V++NP+LK S++ A FFEGC+SVD F+A+VE
Sbjct: 127 VLEDKEEFICYNTEEETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQALVE 186
Query: 335 RHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPL 156
R+L+V VTG+DR G+ I++NASGWQARILQHECDHLDG LYVDKM+PRTFR+ N+DLPL
Sbjct: 187 RYLDVEVTGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNVDLPL 246
Query: 155 AEGCPKLGPQ 126
A GCPKLGP+
Sbjct: 247 ARGCPKLGPR 256
>gi|242046748|ref|XP_002461120.1| hypothetical protein SORBIDRAFT_02g041130
[Sorghum bicolor]
Length = 193
Score = 282 bits (720), Expect = 7e-074
Identities = 136/187 (72%), Positives = 160/187 (85%)
Frame = -1
Query: 692 PDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIV 513
P V AGDPVLHE A+EV P ++ SE++Q IID MV VMR APGVGLAAPQIGVPLRIIV
Sbjct: 5 PGTVKAGDPVLHEPAQEVAPGDVRSEKVQGIIDRMVDVMRKAPGVGLAAPQIGVPLRIIV 64
Query: 512 LEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVER 333
LEDT+EYISYA K+E AQDRRPFDL++++NP++K +S + ALFFEGC+SVDG+RAVVER
Sbjct: 65 LEDTQEYISYAPKKEIEAQDRRPFDLLIIINPKIKNTSKRTALFFEGCLSVDGYRAVVER 124
Query: 332 HLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLA 153
HL+V V+G DR G I+V ASGWQARILQHECDHL+G LYVD+M+PRTFR VDNLDLPL
Sbjct: 125 HLDVEVSGLDRNGSAIKVQASGWQARILQHECDHLEGTLYVDRMVPRTFRIVDNLDLPLP 184
Query: 152 EGCPKLG 132
GCP+LG
Sbjct: 185 IGCPQLG 191
>gi|226510000|ref|NP_001140879.1| hypothetical protein LOC100272955 [Zea mays]
Length = 256
Score = 282 bits (719), Expect = 9e-074
Identities = 139/208 (66%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Frame = -1
Query: 740 GWLLGL-----GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVM 576
GWL GL G + P V AGDPVLHE A+EV P ++ SE++Q +ID MV VM
Sbjct: 47 GWLSGLLGGKGGGASTAMMVTPGTVKAGDPVLHEPAQEVAPGDVLSEKVQGVIDRMVDVM 106
Query: 575 RLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSD 396
R APGVGLAAPQIGVPLRIIVLEDT+EYISYA K++ AQDRRPFDL+V++NP++K++S
Sbjct: 107 RRAPGVGLAAPQIGVPLRIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKIKSTSK 166
Query: 395 KKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYL 216
+ ALFFEGC+SVDG+RAVVERHL+V V+G DR G ++V ASGWQARILQHECDHL+G L
Sbjct: 167 RTALFFEGCLSVDGYRAVVERHLDVEVSGLDRNGSTMKVRASGWQARILQHECDHLEGTL 226
Query: 215 YVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
YVDKM+ RTFR V+NLDLPL GCP+LG
Sbjct: 227 YVDKMVARTFRVVENLDLPLPTGCPQLG 254
>gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 259
Score = 281 bits (717), Expect = 2e-073
Identities = 140/209 (66%), Positives = 165/209 (78%), Gaps = 6/209 (2%)
Frame = -1
Query: 740 GWLLGL------GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKV 579
GWL GL G V AGDPVLHE A+EV P ++ SE+IQ IID M+ V
Sbjct: 49 GWLSGLLGRKGGGGAPMAMTVTLGTVKAGDPVLHEPAQEVSPGDVPSEKIQDIIDQMIAV 108
Query: 578 MRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASS 399
MR APGVGLAAPQIGVPL+IIVLEDT+EYISY SKE+ AQDR PFDL+V++NP+LK +S
Sbjct: 109 MRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYVSKEDIDAQDRCPFDLLVVINPKLKKTS 168
Query: 398 DKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGY 219
+ A F+EGC+SVDG+RAVVERHL+V V+G DR G+ ++V ASGWQARILQHECDHL+G
Sbjct: 169 KRTACFYEGCLSVDGYRAVVERHLDVEVSGLDRNGRPMKVEASGWQARILQHECDHLEGT 228
Query: 218 LYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
LYVDKM+PRTFRTVDNL+LPLA GCP LG
Sbjct: 229 LYVDKMVPRTFRTVDNLNLPLATGCPPLG 257
>gi|226729275|sp|B6RGY0.1|DEF1A_ORYSJ RecName: Full=Peptide deformylase 1A,
chloroplastic; Short=OsPDF1A; Short=PDF 1A; Flags: Precursor
Length = 260
Score = 280 bits (716), Expect = 2e-073
Identities = 139/209 (66%), Positives = 165/209 (78%), Gaps = 6/209 (2%)
Frame = -1
Query: 740 GWLLGL------GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKV 579
GWL GL G P V AGDPVLHE A++V P +I SE++Q +ID MV V
Sbjct: 50 GWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAV 109
Query: 578 MRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASS 399
MR APGVGLAAPQIGVPL+IIVLEDT+EYISYA K++ AQDRRPFDL+V++NP+LK +S
Sbjct: 110 MRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTS 169
Query: 398 DKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGY 219
+ ALFFEGC+SVDG+RA+VERHL+V V+G DR G+ I+V ASGWQARILQHECDHL+G
Sbjct: 170 KRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGT 229
Query: 218 LYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
LYVD M+PRTFR VDNLDLPL GCP +G
Sbjct: 230 LYVDTMVPRTFRIVDNLDLPLPVGCPPIG 258
>gi|116783457|gb|ABK22950.1| unknown [Picea sitchensis]
Length = 305
Score = 278 bits (711), Expect = 8e-073
Identities = 139/208 (66%), Positives = 164/208 (78%), Gaps = 4/208 (1%)
Frame = -1
Query: 743 AGWLLGLGDNK----KKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVM 576
AG G G K KKK LP++V AGDPVLHE A EV +EIGSERIQKIIDDM+ VM
Sbjct: 96 AGGFFGFGKKKTGFGKKKTVLPEIVQAGDPVLHECAAEVAVDEIGSERIQKIIDDMIAVM 155
Query: 575 RLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSD 396
APG GLAAPQ+GVPL+IIVLED +EYI + KEET AQ+R PFDL++++NP+LK+
Sbjct: 156 WNAPGCGLAAPQLGVPLQIIVLEDKEEYIRFTLKEETEAQERHPFDLLIIINPKLKSKGI 215
Query: 395 KKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYL 216
K A FFEGC+SV+GFR +VERHLEV VTG+ R G I++NA+GW+ARILQHECDHL G L
Sbjct: 216 KTAKFFEGCLSVNGFRGLVERHLEVEVTGFGRDGLPIKINATGWKARILQHECDHLAGLL 275
Query: 215 YVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
YVDK+IPRTFRTV+N LPLA GCPK G
Sbjct: 276 YVDKLIPRTFRTVENFRLPLATGCPKPG 303
>gi|255629341|gb|ACU15015.1| unknown [Glycine max]
Length = 223
Score = 264 bits (674), Expect = 1e-068
Identities = 127/190 (66%), Positives = 157/190 (82%)
Frame = -1
Query: 695 LPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRII 516
L +V AG+ VLH +A EV+ EI SER+QKIIDDMV+VMR APGVGLAAPQIG+PLRII
Sbjct: 34 LAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGVGLAAPQIGIPLRII 93
Query: 515 VLEDTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVE 336
VLED +Y++Y S +E AQDR PFDL+V++NP+LK ++ + ALFFEGC+SV G+ AVVE
Sbjct: 94 VLEDKIQYMAYYSNQELKAQDRTPFDLLVILNPKLKNTTTRTALFFEGCLSVPGYSAVVE 153
Query: 335 RHLEVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPL 156
R+L+V V G+DR G+ I++NA+GWQARILQHECDHLDG LYVDKM+PRTFR +N PL
Sbjct: 154 RYLDVEVAGFDRYGEPIKINATGWQARILQHECDHLDGTLYVDKMVPRTFRAPENSYKPL 213
Query: 155 AEGCPKLGPQ 126
A GCPKLGP+
Sbjct: 214 AHGCPKLGPR 223
>gi|124359186|gb|ABD28402.2| Formylmethionine deformylase [Medicago truncatula]
Length = 266
Score = 242 bits (616), Expect = 8e-062
Identities = 122/206 (59%), Positives = 159/206 (77%), Gaps = 5/206 (2%)
Frame = -1
Query: 770 SSSSSFKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDD 591
SS SS ++ +L +K K +LP +V AGDPVLHE AREVD EI S++IQKIID
Sbjct: 44 SSFSSASSETAFL-----SKTLKSELPHIVQAGDPVLHEPAREVDHSEINSDKIQKIIDG 98
Query: 590 MVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPEL 411
M+ VMR APG+ L+A +IG+PLRIIVLE+ KE + ++E DRRPFDL+V++NP+L
Sbjct: 99 MILVMRNAPGISLSAQKIGIPLRIIVLEEPKENLYNYTEEVNKIIDRRPFDLLVILNPKL 158
Query: 410 KASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDH 231
K S+K LFFEGC+SV GF+AVVER+L+V V G+DR G+ I++NASGW ARILQHECDH
Sbjct: 159 KIKSNKTFLFFEGCLSVHGFQAVVERYLDVEVEGFDRYGEPIKINASGWHARILQHECDH 218
Query: 230 LDGYLYVDKMIPRTFRTVDNLDLPLA 153
LDG LYVDKM+PRTFR+ +N+++ +A
Sbjct: 219 LDGTLYVDKMVPRTFRSWENINMSIA 244
>gi|218188450|gb|EEC70877.1| hypothetical protein OsI_02402 [Oryza sativa Indica
Group]
Length = 155
Score = 240 bits (612), Expect = 2e-061
Identities = 114/153 (74%), Positives = 134/153 (87%)
Frame = -1
Query: 590 MVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEETFAQDRRPFDLMVMVNPEL 411
MV VMR APGVGLAAPQIGVPL+IIVLEDT+EYISYA K++ AQDRRPFDL+V++NP+L
Sbjct: 1 MVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKL 60
Query: 410 KASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQIQVNASGWQARILQHECDH 231
K +S + ALFFEGC+SVDG+RA+VERHL+V V+G DR G+ I+V ASGWQARILQHECDH
Sbjct: 61 KTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDH 120
Query: 230 LDGYLYVDKMIPRTFRTVDNLDLPLAEGCPKLG 132
L+G LYVD M+PRTFR VDNLDLPL GCP +G
Sbjct: 121 LEGTLYVDTMVPRTFRIVDNLDLPLPVGCPPIG 153
>gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula]
Length = 241
Score = 230 bits (585), Expect = 3e-058
Identities = 117/179 (65%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Frame = -1
Query: 818 PVSRPASLNRNLYHLSSSSSSFKTKAGWLLG--LGDNKKKKVDLPDLVAAGDPVLHEKAR 645
P S+P L L SS +++ +T+AG+ G D KKKK+DLPD V AGDPVLHE A+
Sbjct: 35 PFSKPPPLTLTLSSSSSQNATIRTRAGFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQ 94
Query: 644 EVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYASKEET 465
EVDP EI S+++QKIIDDM++VMR APGVGLAAPQIGV RIIVLEDT+E+ISYA KE
Sbjct: 95 EVDPSEIMSDKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVLEDTEEFISYAPKEVL 154
Query: 464 FAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVERHLEVVVTGYDRQGKQ 288
AQDR PFDL+V++NP+LK++S + ALFFEGC+SVDGFRAVVERHL+V VTG DR G Q
Sbjct: 155 KAQDRHPFDLLVILNPKLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGDQ 213
>gi|303281244|ref|XP_003059914.1| predicted protein [Micromonas pusilla
CCMP1545]
Length = 185
Score = 184 bits (467), Expect = 1e-044
Identities = 97/185 (52%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Frame = -1
Query: 686 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLRIIVLE 507
+V AG P L E A EV I + + Q++I +M+ + R GVGLAAPQIGVP RI VLE
Sbjct: 2 IVQAGTPCLREIAEEVPLSSIDTAKTQELIQEMLSICR-GRGVGLAAPQIGVPYRIFVLE 60
Query: 506 DTKEYISYASKEETFAQDRRPFDLMVMVNPELKASSDKKALFFEGCVSVDGFRAVVERHL 327
DT+E +S SK++ A DR+PF V++NP + S+ A FFEGC+SV G+R +V R+L
Sbjct: 61 DTEEGMSDVSKKDLEAMDRKPFAAKVVINPVVTPVSNLSAAFFEGCLSVQGYRGLVRRYL 120
Query: 326 EVVVTGYDRQGKQIQVNASGWQARILQHECDHLDGYLYVDKMIPRTFRTVDNLDLPLAEG 147
EV VTGY G + A GWQARI+QHE DHL+G LYVD+M RTFR VD LD PL
Sbjct: 121 EVRVTGYGGDGSPVDFVARGWQARIVQHEMDHLNGVLYVDRMDTRTFRRVDKLDEPLPPA 180
Query: 146 CPKLG 132
P+ G
Sbjct: 181 HPEFG 185
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,281,875,611,404
Number of Sequences: 15229318
Number of Extensions: 4281875611404
Number of Successful Extensions: 1013544274
Number of sequences better than 0.0: 0
|
