BLASTX 7.6.2
Query= UN38681 /QuerySize=1087
(1086 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G46850.1 | Symbols: | FUNCTIONS IN: molecular... 377 6e-105
>TAIR9_protein||AT5G46850.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN:
endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
PIG-X/PBN1 (InterPro:IPR013233); Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 4; Plants -
13; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
chr5:19010714-19012010 FORWARD
Length = 297
Score = 377 bits (968), Expect = 6e-105
Identities = 193/260 (74%), Positives = 216/260 (83%), Gaps = 6/260 (2%)
Frame = -1
Query: 849 DSDTFCISDHYIMQSYFTTQSSLDESEFRTFLRLQQCSENISYEDA--PPAVAMLQQRDI 676
DSDT CISD YIM+SYFTT +SLD+SEFR FL LQQCS+ + +D+ PA + +Q R+I
Sbjct: 36 DSDTICISDQYIMESYFTTYTSLDDSEFRNFLLLQQCSDKVPTQDSNIVPATSFIQHRNI 95
Query: 675 TGEGSHRHLLTSIKLRPFHSQSQFHELVIVERLPLGVFADPFELHSLQQRRAFRDVSVFG 496
TGEGSHR+L+TSIKL HS+SQF ELVIVERLPLGVFADPFEL SLQQRRAF DVSVFG
Sbjct: 96 TGEGSHRNLITSIKLLLHHSESQFRELVIVERLPLGVFADPFELQSLQQRRAFSDVSVFG 155
Query: 495 DTDLEQPSFRSNRSVVEIHVEINGK----GEIGVKLPLHARYQPIGESGYSRVEFGEPDL 328
DT+LE PSFRSNRSVVEIHVEI+ + GEI KLPLHARYQP+ +SGYSRVEFGEPDL
Sbjct: 156 DTNLELPSFRSNRSVVEIHVEISSRNYENGEISFKLPLHARYQPLDDSGYSRVEFGEPDL 215
Query: 327 FLCSRHVPKAEHEERRCLVLSVGRSKTQTRSVVWEIPAGIRSHTEYVSVVTFVAAVLSAV 148
FLCS HV E RRCLVLS+GRSKT+TRSV W+IPAGIR HTEYVS +TF AAV SA
Sbjct: 216 FLCSSHVQNQRRERRRCLVLSIGRSKTETRSVFWDIPAGIRGHTEYVSALTFAAAVFSAF 275
Query: 147 SILVASVLSTKVESCKNTKQ 88
SILVASVLS+K ESCKN KQ
Sbjct: 276 SILVASVLSSKGESCKNLKQ 295
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,355,950,256
Number of Sequences: 33410
Number of Extensions: 19355950256
Number of Successful Extensions: 615438801
Number of sequences better than 0.0: 0
|