BLASTX 7.6.2
Query= UN38855 /QuerySize=1282
(1281 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46087|NOP2_HUMAN Putative ribosomal RNA methyltransferase NO... 315 5e-085
sp|Q922K7|NOP2_MOUSE Putative ribosomal RNA methyltransferase NO... 308 8e-083
sp|O94268|NOP2_SCHPO Putative ribosomal RNA methyltransferase no... 296 3e-079
sp|P40991|NOP2_YEAST Putative ribosomal RNA methyltransferase No... 280 2e-074
sp|Q60343|Y026_METJA Putative methyltransferase MJ0026 OS=Methan... 132 6e-030
sp|Q12MJ8|RSMF_SHEDO Ribosomal RNA small subunit methyltransfera... 123 4e-027
sp|Q8D9F3|RSMF_VIBVU Ribosomal RNA small subunit methyltransfera... 122 7e-027
sp|Q7MKY6|RSMF_VIBVY Ribosomal RNA small subunit methyltransfera... 122 7e-027
sp|A6TB06|RSMF_KLEP7 Ribosomal RNA small subunit methyltransfera... 121 1e-026
sp|Q87PA5|RSMF_VIBPA Ribosomal RNA small subunit methyltransfera... 118 9e-026
sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransfera... 118 1e-025
sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransfera... 117 2e-025
sp|B7NS84|RSMF_ECO7I Ribosomal RNA small subunit methyltransfera... 117 2e-025
sp|A1S788|RSMF_SHEAM Ribosomal RNA small subunit methyltransfera... 117 2e-025
sp|Q8XCL9|RSMF_ECO57 Ribosomal RNA small subunit methyltransfera... 117 3e-025
sp|B5YQX9|RSMF_ECO5E Ribosomal RNA small subunit methyltransfera... 117 3e-025
sp|A7ZMV8|RSMF_ECO24 Ribosomal RNA small subunit methyltransfera... 116 4e-025
sp|B2VJ83|RSMF_ERWT9 Ribosomal RNA small subunit methyltransfera... 116 5e-025
sp|A7MKH5|RSMF_ENTS8 Ribosomal RNA small subunit methyltransfera... 113 4e-024
sp|A8H3W2|RSMF_SHEPA Ribosomal RNA small subunit methyltransfera... 113 4e-024
>sp|P46087|NOP2_HUMAN Putative ribosomal RNA methyltransferase NOP2 OS=Homo
sapiens GN=NOP2 PE=1 SV=2
Length = 812
Score = 315 bits (806), Expect = 5e-085
Identities = 171/340 (50%), Positives = 223/340 (65%), Gaps = 9/340 (2%)
Frame = -3
Query: 1279 ALAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTI 1100
ALAP+E+ERI+D+ APGGKT+Y+A LMKNTG+I AN+ RLKS+ NLHR+GVTNTI
Sbjct: 379 ALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTI 438
Query: 1099 VCNYDGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLL 920
+ +YDGR PKV+G DRVLLDAPCSGTGVISKD +VK +K +DI + AHLQK+LLL
Sbjct: 439 ISHYDGRQFPKVVG--GFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLL 496
Query: 919 AAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKRSVQLVKTGLDFGQDGFVKFRE 740
+AID V+ATSKTGGY+VY TCS+ V ENE V+DYALKKR+V+LV TGLDFGQ+GF +FRE
Sbjct: 497 SAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRE 556
Query: 739 HRFHPSLNKTKRFYPHVHNMDGFFVAKLKKMSN-MKQTSEGDGDDEALGTVDEADVSSDD 563
RFHPSL T+RFYPH HNMDGFF+AK KK SN + Q+ G+ + VD V
Sbjct: 557 RRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKS 616
Query: 562 DDEEAEAMEEMEKPSVPKKQLKKTKDEAEALGTADEADVSSDDDEAEAMEEMEKPSVPKK 383
++ A ++ + + K+QL+K + +A D E + PSV K
Sbjct: 617 ENSSQPA-KKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV-----PSVTKT 670
Query: 382 QLKKTKESKERLAKSKENKSGKKDKKSKSKNAPIIKKQRK 263
Q + + + A E K + +P ++ +K
Sbjct: 671 QASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKK 710
>sp|Q922K7|NOP2_MOUSE Putative ribosomal RNA methyltransferase NOP2 OS=Mus
musculus GN=Nop2 PE=2 SV=1
Length = 793
Score = 308 bits (787), Expect = 8e-083
Identities = 165/337 (48%), Positives = 217/337 (64%), Gaps = 14/337 (4%)
Frame = -3
Query: 1279 ALAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTI 1100
ALAP+E+ERI+D+ APGGKT+Y+A LMKNTG+I AN+ RLKS+ NLHR+GVTNTI
Sbjct: 364 ALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANADRLKSVVGNLHRLGVTNTI 423
Query: 1099 VCNYDGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLL 920
+ +YDGR PKV+G DRVLLDAPCSGTGVISKD +VK +K +DI++ AHLQK+LLL
Sbjct: 424 ISHYDGRQFPKVVG--GFDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKELLL 481
Query: 919 AAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKRSVQLVKTGLDFGQDGFVKFRE 740
+AID V+A SKTGGY+VY TCS+ V ENE V+DYALKKR+V+LV TGLDFGQ+GF +F+
Sbjct: 482 SAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFQA 541
Query: 739 HRFHPSLNKTKRFYPHVHNMDGFFVAKLKKMSN-----------MKQTSEGDGDDEALGT 593
RFHP+L T+RFYPH HNMDGFF+AK KK SN +E D D+
Sbjct: 542 RRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQPHAGNSAAATPTEPDLKDQVTPK 601
Query: 592 VDEADVSSDDDDEEAEAMEEMEKPSVPKKQLKKTKDEAEALGTADEADVSSDDDEAEAME 413
+ + +A +++ + KK +K A+ G + E V +
Sbjct: 602 SENGSQPTKKARGAVKAKQQLLRQPHSKKPFQKLNGIAKGPGLSTEPSVPDAQVSTRPSQ 661
Query: 412 EMEKPSVPKKQLKKTKESKERLAKSKENKSGKKDKKS 302
V K+ K++++ K+R K K +K K S
Sbjct: 662 SAGNADVNSKR-KRSEKLKQRGPKWKPSKEAAVPKPS 697
>sp|O94268|NOP2_SCHPO Putative ribosomal RNA methyltransferase nop2
OS=Schizosaccharomyces pombe GN=SPBP8B7.20c PE=1 SV=1
Length = 608
Score = 296 bits (757), Expect = 3e-079
Identities = 155/269 (57%), Positives = 202/269 (75%), Gaps = 6/269 (2%)
Frame = -3
Query: 1279 ALAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTI 1100
ALAP+ NERI+D+++APGGK TYVAAL KNTG+IFAN+ R K+L+AN+HR+GV N I
Sbjct: 334 ALAPQPNERILDMSSAPGGKVTYVAALQKNTGIIFANDSNKARTKALSANIHRLGVRNAI 393
Query: 1099 VCNYDGRDLP-KVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLL 923
VCNYDGR P +V+G DRVLLDAPCSGTGVI KD+SVK +KS D +HLQ+QLL
Sbjct: 394 VCNYDGRKFPNEVIG--GFDRVLLDAPCSGTGVIYKDQSVKTNKSERDFDTLSHLQRQLL 451
Query: 922 LAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKR-SVQLVKTGLDFGQDGFVKF 746
L+AID V+A SKTGG+IVYSTCS+ V E+EAVI YALKKR +V+LV TGL+FG++GF +F
Sbjct: 452 LSAIDSVNADSKTGGFIVYSTCSITVDEDEAVIQYALKKRPNVKLVSTGLEFGREGFTRF 511
Query: 745 REHRFHPSLNKTKRFYPHVHNMDGFFVAKLKKMSNMKQTSEGDGDDEALGTVDEADVSSD 566
RE RFHPSL T+R+YPHVHN+DGFFVAKLKK+S+ K + DD GT ++ ++ +
Sbjct: 512 REKRFHPSLKLTRRYYPHVHNIDGFFVAKLKKISD-KIPTVNVADDMKDGTNNDVEIEKN 570
Query: 565 DDD-EEAEAMEEMEKPSVPKKQLKKTKDE 482
+ + +E +K + + + K K +
Sbjct: 571 STEIDNITFNDEADKEIIEQNRRKWLKSK 599
>sp|P40991|NOP2_YEAST Putative ribosomal RNA methyltransferase Nop2
OS=Saccharomyces cerevisiae GN=NOP2 PE=1 SV=1
Length = 618
Score = 280 bits (714), Expect = 2e-074
Identities = 147/268 (54%), Positives = 194/268 (72%), Gaps = 12/268 (4%)
Frame = -3
Query: 1279 ALAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTI 1100
AL P ENERI+D+AAAPGGKTTY++A+MKNTG +FAN+ R KSL AN+HR+G TNTI
Sbjct: 340 ALDPHENERILDMAAAPGGKTTYISAMMKNTGCVFANDANKSRTKSLIANIHRLGCTNTI 399
Query: 1099 VCNYDGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLL 920
VCNYD R+ PKV+G DR+LLDAPCSGTGVI KD+SVKVS++ +D + HLQKQLLL
Sbjct: 400 VCNYDAREFPKVIG--GFDRILLDAPCSGTGVIGKDQSVKVSRTEKDFIQIPHLQKQLLL 457
Query: 919 AAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKR-SVQLVKTGLDFGQDGFVKFR 743
+AID VD SK GG IVYSTCS+ V E+EAVIDYAL+KR +V+LV TGL G++ F +R
Sbjct: 458 SAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVIDYALRKRPNVKLVDTGLAIGKEAFTSYR 517
Query: 742 EHRFHPSLNKTKRFYPHVHNMDGFFVAKLKKM------SNMKQTSEGD--GDDEALGT-V 590
+FHPS+ +R+YPH +N+DGFFVAK +K+ N E + EAL +
Sbjct: 518 GKKFHPSVKLARRYYPHTYNVDGFFVAKFQKIGPSSFDDNQASAKEKETAARKEALEEGI 577
Query: 589 DEADVSSDDDDEEAEAMEEMEKPSVPKK 506
+D ++ +D+E+ + +E+ K ++ KK
Sbjct: 578 IHSDFATFEDEEDDKYIEKSVKNNLLKK 605
>sp|Q60343|Y026_METJA Putative methyltransferase MJ0026 OS=Methanocaldococcus
jannaschii GN=MJ0026 PE=3 SV=1
Length = 274
Score = 132 bits (331), Expect = 6e-030
Identities = 81/166 (48%), Positives = 111/166 (66%), Gaps = 11/166 (6%)
Frame = -3
Query: 1276 LAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIV 1097
L PRE++ I+D+ AAPGGKTT++A LMKN G I A E+ R K+L +N++RMGV NTI+
Sbjct: 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTII 138
Query: 1096 CNYDGRDLPKVLGEKSV--DRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLL 923
N D R L + + D++LLDAPCSG I KD++ VS+ EDIK + QK+L+
Sbjct: 139 INADMRKYKDYLLKNEIFFDKILLDAPCSGN--IIKDKNRNVSE--EDIKYCSLRQKELI 194
Query: 922 LAAIDMVDATSKTGGYIVYSTCSLMVAENEAVIDYALKKRS-VQLV 788
ID++ K G +VYSTCS+ V ENE VI Y L+KR+ V+L+
Sbjct: 195 DIGIDLL----KKDGELVYSTCSMEVEENEEVIKYILQKRNDVELI 236
>sp|Q12MJ8|RSMF_SHEDO Ribosomal RNA small subunit methyltransferase F
OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=rsmF PE=3 SV=1
Length = 505
Score = 123 bits (307), Expect = 4e-027
Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Frame = -3
Query: 1255 RIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGRD 1076
R++D+A+APG KTT +AALM N GL+ ANE R+K L+AN+ RMGV+N + ++DGR
Sbjct: 118 RVLDMASAPGSKTTQMAALMNNNGLLIANEYSASRVKVLHANVLRMGVSNCALTHFDGR- 176
Query: 1075 LPKVLGE---KSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDM 905
V GE ++ D VLLDAPC G G + KD++ L+D+ A QK L+ AA
Sbjct: 177 ---VFGEYQYEAFDAVLLDAPCGGEGTVRKDQNALKEWQLDDVIAIADTQKDLIEAAF-- 231
Query: 904 VDATSKTGGYIVYSTCSLMVAENEAVIDYALKK 806
K GG +VYSTC+L EN+A+ + L +
Sbjct: 232 --LALKPGGALVYSTCTLSQLENQAICQHLLSR 262
>sp|Q8D9F3|RSMF_VIBVU Ribosomal RNA small subunit methyltransferase F OS=Vibrio
vulnificus GN=rsmF PE=3 SV=1
Length = 472
Score = 122 bits (305), Expect = 7e-027
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Frame = -3
Query: 1276 LAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIV 1097
L + E ++D AAAPG KTT +AALM N G++ ANE R+K L+AN+ R GV N +
Sbjct: 111 LGENQFESVLDTAAAPGSKTTQIAALMNNQGILVANEYAASRVKVLHANIERCGVRNAAL 170
Query: 1096 CNYDGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLA 917
N+DGR L E S D VLLDAPCSG G + KDE + S E + + A QK L+ +
Sbjct: 171 SNFDGRVFGGWLPE-SFDAVLLDAPCSGEGTVRKDEDAMKNWSQESVLEIAATQKDLIES 229
Query: 916 AIDMVDATSKTGGYIVYSTCSLMVAENEAV 827
A + K GG +VYSTC+L EN+ V
Sbjct: 230 AFQAL----KPGGVMVYSTCTLSEEENQQV 255
>sp|Q7MKY6|RSMF_VIBVY Ribosomal RNA small subunit methyltransferase F OS=Vibrio
vulnificus (strain YJ016) GN=rsmF PE=3 SV=2
Length = 472
Score = 122 bits (305), Expect = 7e-027
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Frame = -3
Query: 1276 LAPRENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIV 1097
L + E ++D AAAPG KTT +AALM N G++ ANE R+K L+AN+ R GV N +
Sbjct: 111 LGENQFESVLDTAAAPGSKTTQIAALMNNQGILVANEYAASRVKVLHANIERCGVRNAAL 170
Query: 1096 CNYDGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLA 917
N+DGR L E S D VLLDAPCSG G + KDE + S E + + A QK L+ +
Sbjct: 171 SNFDGRVFGGWLPE-SFDAVLLDAPCSGEGTVRKDEDAMKNWSQESVLEIAATQKDLIES 229
Query: 916 AIDMVDATSKTGGYIVYSTCSLMVAENEAV 827
A + K GG +VYSTC+L EN+ V
Sbjct: 230 AFQAL----KPGGVMVYSTCTLSEEENQQV 255
>sp|A6TB06|RSMF_KLEP7 Ribosomal RNA small subunit methyltransferase F
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=rsmF PE=3 SV=2
Length = 477
Score = 121 bits (302), Expect = 1e-026
Identities = 70/165 (42%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Frame = -3
Query: 1267 RENERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNY 1088
R+ ER++DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++
Sbjct: 116 RQPERVMDVAAAPGSKTTQIAARMGNAGGILANEFSASRVKVLHANISRCGISNVALTHF 175
Query: 1087 DGRDLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAID 908
DGR L E + D +LLDAPCSG GV+ KD + S E A Q++L ID
Sbjct: 176 DGRVFGAALPE-TFDAILLDAPCSGEGVVRKDADALKNWSPESNLDIAATQREL----ID 230
Query: 907 MVDATSKTGGYIVYSTCSLMVAENEAVIDYALKK--RSVQLVKTG 779
+ GG +VYSTC+L EN++VI++ L + ++V+++ G
Sbjct: 231 SAFHALRPGGTLVYSTCTLNREENQSVIEWLLSRYPQAVEILPLG 275
>sp|Q87PA5|RSMF_VIBPA Ribosomal RNA small subunit methyltransferase F OS=Vibrio
parahaemolyticus GN=rsmF PE=3 SV=1
Length = 478
Score = 118 bits (295), Expect = 9e-026
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+ ++D AAAPG KTT +AALMKN G++ ANE R+K L+AN+ R GV N + N+DGR
Sbjct: 117 DAVLDTAAAPGSKTTQIAALMKNEGVLVANEYAASRVKVLHANIERCGVRNAALSNFDGR 176
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E+ D VLLDAPCSG G + KDE + + + + A QK L+ +A +
Sbjct: 177 VFGGWLPEQ-FDAVLLDAPCSGEGTVRKDEDAMKNWTQASVLEIADTQKDLIESAFHAL- 234
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
K GG +VYSTC+L EN+ V
Sbjct: 235 ---KPGGVLVYSTCTLSTEENQQV 255
>sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransferase F
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
GN=rsmF PE=3 SV=1
Length = 479
Score = 118 bits (294), Expect = 1e-025
Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
ERI+DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 ERIMDVAAAPGSKTTQIAARMNNQGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E + D +LLDAPCSG GV+ KD + S+E A Q++L ID
Sbjct: 179 VFGAALPE-TFDAILLDAPCSGEGVVRKDPDALKNWSVESNLDIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
+ GG +VYSTC+L ENE+V
Sbjct: 234 HALRPGGTLVYSTCTLNREENESV 257
>sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransferase F
OS=Enterobacter sp. (strain 638) GN=rsmF PE=3 SV=1
Length = 480
Score = 117 bits (293), Expect = 2e-025
Identities = 70/158 (44%), Positives = 97/158 (61%), Gaps = 6/158 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
ER++DVAAAPG KTT +AA M N G+I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 ERVMDVAAAPGSKTTQIAARMGNRGVILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E S D +LLDAPCSG GV+ KD + S+ + A Q++L ID
Sbjct: 179 VFGAALPE-SFDAILLDAPCSGEGVVRKDPDALKNWSVASNLEIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAVIDYALKKRSVQLVK 785
+ GG +VYSTC+L ENE+V + LK++ Q V+
Sbjct: 234 HALRPGGMLVYSTCTLNRDENESVCLW-LKEQYPQAVE 270
>sp|B7NS84|RSMF_ECO7I Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rsmF PE=3 SV=1
Length = 479
Score = 117 bits (292), Expect = 2e-025
Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+R++DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E D +LLDAPCSG GV+ KD + S E ++ A Q++L ID
Sbjct: 179 VFGAALPE-MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
+ GG +VYSTC+L ENEAV
Sbjct: 234 HALRPGGTLVYSTCTLNREENEAV 257
>sp|A1S788|RSMF_SHEAM Ribosomal RNA small subunit methyltransferase F
OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rsmF PE=3
SV=1
Length = 467
Score = 117 bits (292), Expect = 2e-025
Identities = 70/150 (46%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Frame = -3
Query: 1252 IVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGRDL 1073
++DVA+APG KTT +AALM N GLI ANE R K+L+ANL RMGV N + +DGR
Sbjct: 115 LLDVASAPGSKTTQLAALMHNQGLIIANEYSASRTKALHANLQRMGVANVAITQFDGRVF 174
Query: 1072 PKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVDAT 893
L E ++D + LDAPCSG G + KD + ++I+ A LQ+ L ID
Sbjct: 175 GAHLYE-TLDAIQLDAPCSGEGTVRKDPLSLKNWCPDEIEAIAELQRDL----IDSAFQA 229
Query: 892 SKTGGYIVYSTCSLMVAENEAVIDYALKKR 803
K GG +VYSTC+L ENE V + LK+R
Sbjct: 230 LKPGGVLVYSTCTLNRRENEDVCHF-LKER 258
>sp|Q8XCL9|RSMF_ECO57 Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O157:H7 GN=rsmF PE=3 SV=2
Length = 479
Score = 117 bits (291), Expect = 3e-025
Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+R++DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E D +LLDAPCSG GV+ KD + S E ++ A Q++L ID
Sbjct: 179 VFGAALPE-MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
++GG +VYSTC+L ENE+V
Sbjct: 234 HALRSGGTLVYSTCTLNREENESV 257
>sp|B5YQX9|RSMF_ECO5E Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rsmF PE=3 SV=1
Length = 479
Score = 117 bits (291), Expect = 3e-025
Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+R++DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E D +LLDAPCSG GV+ KD + S E ++ A Q++L ID
Sbjct: 179 VFGAALPE-MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
++GG +VYSTC+L ENE+V
Sbjct: 234 HALRSGGTLVYSTCTLNREENESV 257
>sp|A7ZMV8|RSMF_ECO24 Ribosomal RNA small subunit methyltransferase F
OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rsmF PE=3 SV=2
Length = 479
Score = 116 bits (290), Expect = 4e-025
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+R++DVAAAPG KTT +AA M N G I ANE R+K L+AN+ R G++N + ++DGR
Sbjct: 119 QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR 178
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
+ E D +LLDAPCSG GV+ KD + S E ++ A Q++L ID
Sbjct: 179 VFGAAVPE-MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL----IDSAF 233
Query: 898 ATSKTGGYIVYSTCSLMVAENEAV 827
+ GG +VYSTC+L ENEAV
Sbjct: 234 HALRPGGTLVYSTCTLNQEENEAV 257
>sp|B2VJ83|RSMF_ERWT9 Ribosomal RNA small subunit methyltransferase F OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=rsmF PE=3 SV=1
Length = 478
Score = 116 bits (289), Expect = 5e-025
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Frame = -3
Query: 1258 ERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGR 1079
+R++D+AAAPG KTT +AA M N G I ANE R+K L+ANL R GV+NT + ++DGR
Sbjct: 120 QRVMDMAAAPGSKTTQIAAHMGNRGAILANEYSASRVKVLHANLSRCGVSNTAMTHFDGR 179
Query: 1078 DLPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVD 899
L E D VLLDAPCSG GV+ KD + S ++ A Q+ L+ +A +
Sbjct: 180 VFGPALPE-CFDAVLLDAPCSGEGVVRKDADALRNWSQSSTEEIAATQQALINSAFHAL- 237
Query: 898 ATSKTGGYIVYSTCSLMVAENEAVIDYALKK 806
+ GG +VYSTC+L EN+ V++ L++
Sbjct: 238 ---RPGGTLVYSTCTLNTRENQQVVNGLLEQ 265
>sp|A7MKH5|RSMF_ENTS8 Ribosomal RNA small subunit methyltransferase F
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rsmF PE=3 SV=2
Length = 480
Score = 113 bits (281), Expect = 4e-024
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Frame = -3
Query: 1255 RIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDGRD 1076
R++DVAAAPG KTT +AALM+N G I ANE R+K L+AN+ R G+ N + ++DGR
Sbjct: 121 RVMDVAAAPGSKTTQIAALMQNQGFILANEYSASRVKVLHANISRCGIHNVGLTHFDGRV 180
Query: 1075 LPKVLGEKSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAIDMVDA 896
L E+ D +LLDAPCSG GV+ KD + S + ++ A Q++L ID
Sbjct: 181 FGAALPEQ-FDAILLDAPCSGEGVVRKDPDALRNWSPQSDQEIAATQREL----IDSAFH 235
Query: 895 TSKTGGYIVYSTCSLMVAENEAVIDYALKK 806
GG +VYSTC+L EN+ + + L +
Sbjct: 236 ALAPGGTLVYSTCTLNREENQETVRWLLAR 265
>sp|A8H3W2|RSMF_SHEPA Ribosomal RNA small subunit methyltransferase F
OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rsmF PE=3
SV=1
Length = 488
Score = 113 bits (281), Expect = 4e-024
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
Frame = -3
Query: 1261 NERIVDVAAAPGGKTTYVAALMKNTGLIFANEMKVPRLKSLNANLHRMGVTNTIVCNYDG 1082
N+ ++D+A+APG KTT +AALMKN GL+ ANE R+K L+AN+ RMGV N + ++D
Sbjct: 128 NKIVLDMASAPGSKTTQIAALMKNQGLLIANEYSASRVKVLHANVARMGVANCALTHFDA 187
Query: 1081 RDLPKVLGE---KSVDRVLLDAPCSGTGVISKDESVKVSKSLEDIKKFAHLQKQLLLAAI 911
R V GE ++ D +LLDAPCSG G I KD + D K QK L+ +A
Sbjct: 188 R----VFGEYMFETFDSILLDAPCSGEGTIRKDPDALKNWDNNDDKGIVETQKALIESAF 243
Query: 910 DMVDATSKTGGYIVYSTCSLMVAENEAV 827
K GG +VYSTC+L EN+ V
Sbjct: 244 ----LALKVGGSLVYSTCALSRQENQDV 267
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,686,369,441
Number of Sequences: 518415
Number of Extensions: 151686369441
Number of Successful Extensions: 928182970
Number of sequences better than 0.0: 0
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