BLASTX 7.6.2
Query= UN39088 /QuerySize=852
(851 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 243 1e-064
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 243 1e-064
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 99 2e-021
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 95 6e-020
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 89 2e-018
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 67 2e-011
TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular... 58 8e-009
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 243 bits (619), Expect = 1e-064
Identities = 128/174 (73%), Positives = 146/174 (83%), Gaps = 9/174 (5%)
Frame = -1
Query: 776 MASLSISSSSTIINSRASPTR--QASFSSPSCISLPMLP----PKPLQSTAYCRKIARNV 615
MASLS+SSSSTII+SRA P+R AS SSPSCISLP LP + ++TAYCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 614 LTRA-TEV--EASVTAEADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGL 444
+TRA TEV + T EA+TTELPEIVKTAQEAWEKV+DKYAIGSLAFA +VALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 443 ISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILGSN 282
ISAID+LPL PGV ELVGIGYTGWF YKN++FKPDRE LF+KVK TY+DILGS+
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 243 bits (619), Expect = 1e-064
Identities = 128/174 (73%), Positives = 146/174 (83%), Gaps = 9/174 (5%)
Frame = -1
Query: 776 MASLSISSSSTIINSRASPTR--QASFSSPSCISLPMLP----PKPLQSTAYCRKIARNV 615
MASLS+SSSSTII+SRA P+R AS SSPSCISLP LP + ++TAYCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 614 LTRA-TEV--EASVTAEADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGL 444
+TRA TEV + T EA+TTELPEIVKTAQEAWEKV+DKYAIGSLAFA +VALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 443 ISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILGSN 282
ISAID+LPL PGV ELVGIGYTGWF YKN++FKPDRE LF+KVK TY+DILGS+
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 99 bits (246), Expect = 2e-021
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = -1
Query: 629 IARNVLTRATEVEASVTAEADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGST 450
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA +VALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASL 101
Query: 449 GLISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILG 288
LI+AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ L + VK + DILG
Sbjct: 102 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 95 bits (234), Expect = 6e-020
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = -1
Query: 629 IARNVLTRATEVEASVTAEADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGST 450
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA +VALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASL 100
Query: 449 GLISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILG 288
LI+AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ L + VK + DILG
Sbjct: 101 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 154
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 89 bits (220), Expect = 2e-018
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 14/169 (8%)
Frame = -1
Query: 770 SLSISSSSTIINSRASPTRQASFSSPSCISLPMLPPKPLQSTAY---CRKIARNVLTRA- 603
++S+++SS S A + S C ++P LPP+ +++ + ++ N L +
Sbjct: 2 AISVAASS----SMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVE 57
Query: 602 ---TEVEASVTAEADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGLISAI 432
T + T+ DT EL + +E W+ +E+K + A+VA+W S+ ++ AI
Sbjct: 58 LLKTRASSEETSSIDTNEL---ITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAI 114
Query: 431 DKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILGS 285
+ +PL P V ELVG+GYTGWFVY+ ++FK R+ L + ++ + I GS
Sbjct: 115 NSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 67 bits (161), Expect = 2e-011
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Frame = -1
Query: 563 TELPEIVKTAQEAWEKVED-------KYAIGSLAFAALVALWGSTGLISAIDKLPLFPGV 405
+E P+ +A E + D Y+I A+VAL+ ++ ++S+++ +PLFP +
Sbjct: 91 SEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKL 150
Query: 404 FELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILGSNS 279
E+VG+GYT WF + ++FK +RE L KV + + +LGS+S
Sbjct: 151 MEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSDS 192
>TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 172 Blast hits to 172 proteins in 28 species:
Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 127;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 128
Score = 58 bits (138), Expect = 8e-009
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -1
Query: 437 AIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVLFQKVKDTYRDILG 288
AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ L + VK + DILG
Sbjct: 77 AIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,544,287,316
Number of Sequences: 33410
Number of Extensions: 19544287316
Number of Successful Extensions: 625900727
Number of sequences better than 0.0: 0
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