BLASTX 7.6.2
Query= UN39134 /QuerySize=871
(870 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|145845945|gb|ABP96967.1| flowering locus C protein [Sinapis a... 364 2e-098
gi|17933450|gb|AAK70215.1| MADS-box protein [Brassica napus] 362 5e-098
gi|113015816|gb|ABI29999.1| flowering locus C1 [Brassica rapa su... 358 7e-097
gi|104162042|emb|CAJ77613.1| flowering protein [Brassica olerace... 352 6e-095
gi|302034467|gb|ADK92387.1| FLC [Eutrema wasabi] 322 4e-086
gi|63146618|gb|AAY34137.1| flowering locus C [Eutrema halophilum] 318 1e-084
gi|30523252|gb|AAP31677.1| flowering locus C [Brassica oleracea ... 310 2e-082
gi|17933454|gb|AAK70217.1| MADS-box protein [Brassica napus] 309 5e-082
gi|281486459|gb|ADA70732.1| flowering locus C3 [Brassica rapa va... 308 1e-081
gi|296923607|dbj|BAJ08315.1| flowering locus C [Arabidopsis hall... 307 2e-081
gi|30523360|gb|AAP31678.1| flowering locus C [Brassica rapa] 306 3e-081
gi|297811115|ref|XP_002873441.1| MADS-box flowering locus C [Ara... 305 7e-081
gi|282721250|gb|ADA83718.1| flowering locus C1 variant 2 [Brassi... 305 9e-081
gi|30523364|gb|AAP31680.1| flowering locus C [Brassica rapa] 304 1e-080
gi|145617253|gb|ABP88099.1| FLC3 [Brassica rapa subsp. chinensis] 304 2e-080
gi|45181459|gb|AAS55409.1| MADS-box protein [Brassica rapa] 304 2e-080
gi|119699075|gb|ABL96240.1| flowering locus C [Brassica rapa var... 304 2e-080
gi|30523366|gb|AAP31681.1| flowering locus C [Brassica rapa] 303 3e-080
gi|282721245|gb|ADA83715.1| flowering locus C1 variant 2 [Brassi... 303 3e-080
gi|15238067|ref|NP_196576.1| MADS-box protein FLOWERING LOCUS C ... 301 1e-079
>gi|145845945|gb|ABP96967.1| flowering locus C protein [Sinapis alba]
Length = 197
Score = 364 bits (932), Expect = 2e-098
Identities = 190/197 (96%), Positives = 194/197 (98%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQHDDDLKAL+RQS PLNCGSHHELLELVESKLEESN +NVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHDDDLKALDRQSKPLNCGSHHELLELVESKLEESNDNNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LE+ALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNL+RAEADNMEVS
Sbjct: 121 EENLESALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLVRAEADNMEVS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|17933450|gb|AAK70215.1| MADS-box protein [Brassica napus]
Length = 197
Score = 362 bits (928), Expect = 5e-098
Identities = 189/197 (95%), Positives = 194/197 (98%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQHDDDLKAL+RQS L+CGSHHELLELVESKLEESNVDNVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEK+NL+RAEADNM+VS
Sbjct: 121 EEHLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKSNLVRAEADNMDVS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|113015816|gb|ABI29999.1| flowering locus C1 [Brassica rapa subsp.
pekinensis]
Length = 206
Score = 358 bits (918), Expect = 7e-097
Identities = 187/196 (95%), Positives = 192/196 (97%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQHDDDLKAL+RQS L+CGSHHELLELVE KLEESNVDNVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHDDDLKALDRQSKALDCGSHHELLELVEGKLEESNVDNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEK+NL+RAEADNM+VS
Sbjct: 121 EEHLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKSNLVRAEADNMDVS 180
Query: 625 PGQISDINLPVTLPLL 672
PGQISDINLPVTLPLL
Sbjct: 181 PGQISDINLPVTLPLL 196
>gi|104162042|emb|CAJ77613.1| flowering protein [Brassica oleracea var.
alboglabra]
Length = 197
Score = 352 bits (901), Expect = 6e-095
Identities = 186/197 (94%), Positives = 190/197 (96%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIK IENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSAS KLYSFSSG
Sbjct: 1 MGRKKLEIKPIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASRKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+RQS L+CGSHHELLELVESKLEESNVDNVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHGDDLKALDRQSKALDCGSHHELLELVESKLEESNVDNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEK+NL+RAEAD MEVS
Sbjct: 121 EEHLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKSNLVRAEADYMEVS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|302034467|gb|ADK92387.1| FLC [Eutrema wasabi]
Length = 197
Score = 322 bits (825), Expect = 4e-086
Identities = 171/197 (86%), Positives = 182/197 (92%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+ QS LN GSHHELLE+VESKL ESNVDNVSV L QL
Sbjct: 61 DNLVKILDRYGKQHFDDLKALDLQSKALNYGSHHELLEVVESKLVESNVDNVSVDFLAQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E+ LE ALS+TRARKTELMLKLV++LKEKEK+L+EEN VLASQMEKN+ + AEADNME+S
Sbjct: 121 EDHLETALSLTRARKTELMLKLVDSLKEKEKMLKEENQVLASQMEKNHHVGAEADNMEIS 180
Query: 625 PGQISDINLPVTLPLLN 675
P QISDINLPVTLPLLN
Sbjct: 181 PRQISDINLPVTLPLLN 197
>gi|63146618|gb|AAY34137.1| flowering locus C [Eutrema halophilum]
Length = 197
Score = 318 bits (813), Expect = 1e-084
Identities = 169/197 (85%), Positives = 180/197 (91%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+ QS L+ GSHHELLELVES+L +S+VDN SV SL QL
Sbjct: 61 DNLVKILDRYGKQHADDLKALDLQSKALSYGSHHELLELVESQLVDSSVDNASVDSLAQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E+ LE ALSVTRARKTELMLKLV++LKEKEKLL+ EN VLASQMEKN + AEADNME+S
Sbjct: 121 EDHLETALSVTRARKTELMLKLVDSLKEKEKLLKRENQVLASQMEKNQHVGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISD NLPVTLPLLN
Sbjct: 181 PGQISDSNLPVTLPLLN 197
>gi|30523252|gb|AAP31677.1| flowering locus C [Brassica oleracea var. capitata]
Length = 197
Score = 310 bits (794), Expect = 2e-082
Identities = 164/197 (83%), Positives = 180/197 (91%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GL+EKARQLSVLCDAS+ALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLVEKARQLSVLCDASIALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DDLKAL+ QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHADDLKALDLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LASQ EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALASQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|17933454|gb|AAK70217.1| MADS-box protein [Brassica napus]
Length = 197
Score = 309 bits (790), Expect = 5e-082
Identities = 165/197 (83%), Positives = 178/197 (90%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DDLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHADDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|281486459|gb|ADA70732.1| flowering locus C3 [Brassica rapa var. purpuraria]
Length = 197
Score = 308 bits (787), Expect = 1e-081
Identities = 164/197 (83%), Positives = 178/197 (90%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GL+EKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLMEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DDLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHADDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|296923607|dbj|BAJ08315.1| flowering locus C [Arabidopsis halleri subsp.
gemmifera]
Length = 196
Score = 307 bits (784), Expect = 2e-081
Identities = 171/197 (86%), Positives = 180/197 (91%), Gaps = 3/197 (1%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+ QS LN GSHHELLELVESKL SNV+NVSV +LVQL
Sbjct: 61 DNLVKILDRYGKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNNVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE E ALSVTRA+KTELMLKLVENLKEKEKLL+EEN VLASQMEKN+ + AEA+ ME+S
Sbjct: 121 EEHFETALSVTRAKKTELMLKLVENLKEKEKLLKEENQVLASQMEKNHHVGAEAE-MEIS 179
Query: 625 P-GQISDINLPVTLPLL 672
P GQISD NLPVTLPLL
Sbjct: 180 PAGQISD-NLPVTLPLL 195
>gi|30523360|gb|AAP31678.1| flowering locus C [Brassica rapa]
Length = 197
Score = 306 bits (783), Expect = 3e-081
Identities = 164/197 (83%), Positives = 177/197 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|297811115|ref|XP_002873441.1| MADS-box flowering locus C [Arabidopsis lyrata
subsp. lyrata]
Length = 196
Score = 305 bits (780), Expect = 7e-081
Identities = 170/197 (86%), Positives = 180/197 (91%), Gaps = 3/197 (1%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+ QS LN GSHHELLELVESKL SNV+NVS +L+QL
Sbjct: 61 DNLVKILDRYGKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNNVSAETLLQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LE ALSVTRA+KTELMLKLVENLKEKEKLL+EEN VLASQMEKN+ + AEA+ ME+S
Sbjct: 121 EEHLETALSVTRAKKTELMLKLVENLKEKEKLLKEENQVLASQMEKNHHVGAEAE-MEIS 179
Query: 625 P-GQISDINLPVTLPLL 672
P GQISD NLPVTLPLL
Sbjct: 180 PAGQISD-NLPVTLPLL 195
>gi|282721250|gb|ADA83718.1| flowering locus C1 variant 2 [Brassica rapa var.
purpuraria]
Length = 214
Score = 305 bits (779), Expect = 9e-081
Identities = 168/209 (80%), Positives = 178/209 (85%), Gaps = 6/209 (2%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQV FSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQHDDDLKAL+RQS L+CGSHHELLELVESKLEESNVDNVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQ+ K + E N+ +
Sbjct: 121 EEHLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQITKVFFVTMEKSNLVRA 180
Query: 625 PGQISDIN----LPVTLPLLN*SPLLIGG 699
D++ + LP+ PLL GG
Sbjct: 181 EADNMDVSPGQISDINLPVT--LPLLKGG 207
>gi|30523364|gb|AAP31680.1| flowering locus C [Brassica rapa]
Length = 197
Score = 304 bits (778), Expect = 1e-080
Identities = 163/197 (82%), Positives = 176/197 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ LDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRTLDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|145617253|gb|ABP88099.1| FLC3 [Brassica rapa subsp. chinensis]
Length = 197
Score = 304 bits (777), Expect = 2e-080
Identities = 163/196 (83%), Positives = 176/196 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLL 672
PGQISDINLPVTLPLL
Sbjct: 181 PGQISDINLPVTLPLL 196
>gi|45181459|gb|AAS55409.1| MADS-box protein [Brassica rapa]
Length = 197
Score = 304 bits (776), Expect = 2e-080
Identities = 162/197 (82%), Positives = 176/197 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKE+LL+EEN LA Q EK NL EADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKERLLKEENQALAGQKEKKNLAGTEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|119699075|gb|ABL96240.1| flowering locus C [Brassica rapa var.
parachinensis]
Length = 197
Score = 304 bits (776), Expect = 2e-080
Identities = 163/197 (82%), Positives = 176/197 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQ
Sbjct: 61 DNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQP 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPVTLPLLN
Sbjct: 181 PGQISDINLPVTLPLLN 197
>gi|30523366|gb|AAP31681.1| flowering locus C [Brassica rapa]
Length = 197
Score = 303 bits (774), Expect = 3e-080
Identities = 162/197 (82%), Positives = 176/197 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKR+ENKSSRQVTFSKRR+GLIEKARQLSVLCDASVALLVVS+SGKLYSFS+G
Sbjct: 1 MGRKKLEIKRMENKSSRQVTFSKRRSGLIEKARQLSVLCDASVALLVVSSSGKLYSFSAG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLV+ILDRYGKQH DLKAL QS L+ GSH+ELLELV+SKL ESNV VSV +LVQL
Sbjct: 61 DNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNVGGVSVDTLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
E LENALS+TRARKTELMLKLV++LKEKEKLL+EEN LA Q EK NL AEADNME+S
Sbjct: 121 EGVLENALSLTRARKTELMLKLVDSLKEKEKLLKEENQALAGQKEKKNLAGAEADNMEMS 180
Query: 625 PGQISDINLPVTLPLLN 675
PGQISDINLPV LPLLN
Sbjct: 181 PGQISDINLPVPLPLLN 197
>gi|282721245|gb|ADA83715.1| flowering locus C1 variant 2 [Brassica rapa var.
purpuraria]
Length = 193
Score = 303 bits (774), Expect = 3e-080
Identities = 161/188 (85%), Positives = 169/188 (89%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQV FSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQHDDDLKAL+RQS L+CGSHHELLELVESKLEESNVDNVSVGSLVQL
Sbjct: 61 DNLVKILDRYGKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDNVSVGSLVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQ+ K + E N+ +
Sbjct: 121 EEHLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQITKVFFVTMEKSNLVRA 180
Query: 625 PGQISDIN 648
D++
Sbjct: 181 EADNMDVS 188
>gi|15238067|ref|NP_196576.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis
thaliana]
Length = 196
Score = 301 bits (770), Expect = 1e-079
Identities = 167/197 (84%), Positives = 179/197 (90%), Gaps = 3/197 (1%)
Frame = +1
Query: 85 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 264
MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 265 DNLVKILDRYGKQHDDDLKALERQSNPLNCGSHHELLELVESKLEESNVDNVSVGSLVQL 444
DNLVKILDRYGKQH DDLKAL+ QS LN GSH+ELLELV+SKL SNV NVS+ +LVQL
Sbjct: 61 DNLVKILDRYGKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQL 120
Query: 445 EEQLENALSVTRARKTELMLKLVENLKEKEKLLEEENHVLASQMEKNNLLRAEADNMEVS 624
EE LE ALSVTRA+KTELMLKLVENLKEKEK+L+EEN VLASQME N+ + AEA+ ME+S
Sbjct: 121 EEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAEAE-MEMS 179
Query: 625 P-GQISDINLPVTLPLL 672
P GQISD NLPVTLPLL
Sbjct: 180 PAGQISD-NLPVTLPLL 195
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,369,264,541,557
Number of Sequences: 15229318
Number of Extensions: 4369264541557
Number of Successful Extensions: 1024086044
Number of sequences better than 0.0: 0
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