BLASTX 7.6.2
Query= UN39246 /QuerySize=992
(991 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30693595|ref|NP_566958.3| RNA recognition motif-containing pr... 386 4e-105
gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana] 384 1e-104
gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana] 366 5e-099
gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT... 365 7e-099
gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast,... 284 2e-074
gi|224106031|ref|XP_002314019.1| predicted protein [Populus tric... 280 4e-073
gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Popul... 279 5e-073
gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal p... 268 9e-070
gi|225450219|ref|XP_002265629.1| PREDICTED: hypothetical protein... 245 8e-063
gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT... 226 7e-057
gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japo... 225 1e-056
gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis] 223 3e-056
gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare ... 218 2e-054
gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding... 146 9e-033
gi|20159727|gb|AAM11915.1| plastid-specific ribosomal protein 2 ... 139 1e-030
gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryz... 118 2e-024
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 253
Score = 386 bits (990), Expect = 4e-105
Identities = 206/258 (79%), Positives = 229/258 (88%), Gaps = 9/258 (3%)
Frame = +2
Query: 62 FLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATM 241
FLT VVSIKPT+FSF SES T L ++ N F+ +K FPS+ S R+SRTR IP A
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNVFS--SKPFPSLAGTFS--RSSRTRFIPYAVT 59
Query: 242 ETEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRF 418
ETEEKP ALDP++E++RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRF
Sbjct: 60 ETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119
Query: 419 GFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDS 598
GFATMKSV DANAV+EKLNG T+EGRE+KVNITEKP+ +SSPDLS+LQSED+AFVDS
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDS 175
Query: 599 PYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAI 778
PYKVYVGNLAK+VTKEMLE+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDVEAAI
Sbjct: 176 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAI 235
Query: 779 VAFNNFLLEGQKIRVNKA 832
VA NN LLEGQKIRVNKA
Sbjct: 236 VALNNSLLEGQKIRVNKA 253
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 384 bits (985), Expect = 1e-104
Identities = 204/258 (79%), Positives = 229/258 (88%), Gaps = 9/258 (3%)
Frame = +2
Query: 62 FLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATM 241
FLT VVSIKPT+FSF SES T L ++ N F+ +K FPS+ S R+SRTR IP A
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNVFS--SKPFPSLAGTFS--RSSRTRFIPYAVT 59
Query: 242 ETEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRF 418
ETEEKP ALDP++E++RRVYIGNIPRTV+NEQLTKLVEEHGAVE+VQVMYDKYSGRSRRF
Sbjct: 60 ETEEKPAALDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119
Query: 419 GFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDS 598
GFATMKSV DANAV+EKLNG T+EGRE+KVNITEKP+ +SSPDLS+LQSED+AFVDS
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDS 175
Query: 599 PYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAI 778
PYKVYVGNLAK+VTKEMLE+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDVEAA+
Sbjct: 176 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAV 235
Query: 779 VAFNNFLLEGQKIRVNKA 832
VA NN LLEGQKIRVNKA
Sbjct: 236 VALNNSLLEGQKIRVNKA 253
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 366 bits (937), Expect = 5e-099
Identities = 201/263 (76%), Positives = 225/263 (85%), Gaps = 18/263 (6%)
Frame = +2
Query: 59 TFLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRAT 238
TFLT VVSIKPT+FSF SES T L ++ N F+ +K FPS+ S R+SRTR IP A
Sbjct: 3 TFLTNVVSIKPTIFSFQSESFTPLHTRVNVFS--SKPFPSLAGTFS--RSSRTRFIPYAV 58
Query: 239 METEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRR 415
ETEEKP ALDP++E++RRVYIGNIPRTVTNEQLTKLVEEHGAVE +VMYDKYSGRSRR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE--KVMYDKYSGRSRR 116
Query: 416 FGFATMKSVGDANAVIEKLNGT-------TIEGREVKVNITEKPLELSSSSSPDLSLLQS 574
FGFATMKSV DANAV+EKLNG T+EGRE+KVNITEKP+ +SSPDLS+LQS
Sbjct: 117 FGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITEKPI----ASSPDLSVLQS 172
Query: 575 EDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSS 754
ED+AFVDSPYKVYVGNLAK+VTKEMLE+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS
Sbjct: 173 EDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSS 232
Query: 755 DEDVEAAIVAFNNFLLEGQKIRV 823
+EDVEAAIVA NN LLEGQKIR+
Sbjct: 233 EEDVEAAIVALNNSLLEGQKIRL 255
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313
[Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 365 bits (936), Expect = 7e-099
Identities = 195/245 (79%), Positives = 218/245 (88%), Gaps = 8/245 (3%)
Frame = +2
Query: 62 FLTAVVSIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATM 241
FLT VVSIKPT+FSF SES T LQ++ N F+ +K F S+ S R+SRTR IP A
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLQTRANVFS--SKPFHSLAGTFS--RSSRTRFIPYAVT 59
Query: 242 ETEEKP-ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRF 418
ETEEKP ALDP++E++RRVYIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRF
Sbjct: 60 ETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRF 119
Query: 419 GFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDS 598
GFATMKSV DANAV+EKLNG T+EGRE+KVNITEKP+ +SSSPDLSLLQSED+AFVDS
Sbjct: 120 GFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI---ASSSPDLSLLQSEDSAFVDS 176
Query: 599 PYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAI 778
PYKVYVGNLAK+VTKEMLE+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDVEAAI
Sbjct: 177 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAI 236
Query: 779 VAFNN 793
+A NN
Sbjct: 237 LALNN 241
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 256
Score = 284 bits (725), Expect = 2e-074
Identities = 159/264 (60%), Positives = 196/264 (74%), Gaps = 12/264 (4%)
Frame = +2
Query: 53 MATFLTAVVSIKPTLFSF----HSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTR 220
MAT ++++ SI PT F + T L + + F + ++ PR R R
Sbjct: 1 MAT-ISSLASILPTSTKFTLFTNLPKPTFLILKPTTHFINFSKFSHLDVVLN-PRVPR-R 57
Query: 221 LIPRATMETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYS 400
L A P DP++E+++R+YIGNIPRTV N++LTK+VEEHGAVE+ +VMYDKYS
Sbjct: 58 LFAVAEEAAPVAPPPDPSSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYS 117
Query: 401 GRSRRFGFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSED 580
GRSRRF F TM++V DANAVIEKLNGT I GRE+KVNITEKPL +S DLS LQ E+
Sbjct: 118 GRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPL-----ASGDLSFLQLEE 172
Query: 581 AAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDE 760
+ FVDSP+KVYVGNLAK+VT E+L++ FSEKGKVLSAKVSRVPGTSKS+G+GFV+FS +E
Sbjct: 173 SQFVDSPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEE 232
Query: 761 DVEAAIVAFNNFLLEGQKIRVNKA 832
DVEAAI +FNN LLEGQKIRVNKA
Sbjct: 233 DVEAAISSFNNSLLEGQKIRVNKA 256
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 280 bits (714), Expect = 4e-073
Identities = 151/251 (60%), Positives = 182/251 (72%), Gaps = 9/251 (3%)
Frame = +2
Query: 80 SIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATMETEEKP 259
S K L S+ S + N F FP + T + + ET
Sbjct: 14 STKLALSRNQSKPSFQILKPANPF----NHFPKFTHLHKILNTKAPQRLFAVAEETAPAA 69
Query: 260 ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKS 439
A+DP++E++RR+Y+GNIPRT+TNE+LTK+VEEHGAVE+ +VMYDKYSGRSRRF F TMK+
Sbjct: 70 AVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKT 129
Query: 440 VGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVG 619
DANA IEKLNGT I GRE+KVNITEKPL+ S DL LQS+++ FVDSPYKVYVG
Sbjct: 130 AEDANAAIEKLNGTEIGGREIKVNITEKPLQ-----SLDLPSLQSDESQFVDSPYKVYVG 184
Query: 620 NLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFL 799
NLAK+V + L++ FS+KG VLSAKVSRVPGTSKS+GFGFVTFSS+EDVE AI +FNN L
Sbjct: 185 NLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSL 244
Query: 800 LEGQKIRVNKA 832
LEGQ IRVNKA
Sbjct: 245 LEGQPIRVNKA 255
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 279 bits (713), Expect = 5e-073
Identities = 151/251 (60%), Positives = 181/251 (72%), Gaps = 9/251 (3%)
Frame = +2
Query: 80 SIKPTLFSFHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATMETEEKP 259
S K L S+ S + N F FP + T + + ET
Sbjct: 14 STKLALSRNQSKPSFQILKPANPF----NHFPKFTHLHKILNTKAPQRLFAVAEETAPAA 69
Query: 260 ALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKS 439
A+DP++E++RR+Y+GNIPRT+TNE+LTK+VEEHGAVE+ +VMYDKYSGRSRRF F TMK+
Sbjct: 70 AVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKT 129
Query: 440 VGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVG 619
DANA IEKLNGT I GRE+KVNITEKPL+ S DL LQS++ FVDSPYKVYVG
Sbjct: 130 AEDANAAIEKLNGTEIGGREIKVNITEKPLQ-----SLDLPSLQSDETQFVDSPYKVYVG 184
Query: 620 NLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFL 799
NLAK+V + L++ FS+KG VLSAKVSRVPGTSKS+GFGFVTFSS+EDVE AI +FNN L
Sbjct: 185 NLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSL 244
Query: 800 LEGQKIRVNKA 832
LEGQ IRVNKA
Sbjct: 245 LEGQPIRVNKA 255
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2,
chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
Length = 260
Score = 268 bits (685), Expect = 9e-070
Identities = 141/243 (58%), Positives = 175/243 (72%), Gaps = 10/243 (4%)
Frame = +2
Query: 104 FHSESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSRTRLIPRATMETEEKPALDPNAES 283
F S++ LQS +N F LK K S + P + R + + + + E
Sbjct: 28 FSSQNLVQLQSFSNGFGLKLKTRVS-----TNPPLLKVRAVVTEETSSSSTASSSSDGEG 82
Query: 284 SRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVGDANAVI 463
+RR+Y+GNIPR + N++L +VEEHGA+E +VMYDKYSGRSRRFGF TMK+V DANAVI
Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVI 142
Query: 464 EKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTK 643
EKLN T I GR++KVNITEKPLE D++ Q+ED+ FV+SPYKVY+GNLAK+VT
Sbjct: 143 EKLNDTEIGGRKIKVNITEKPLE-----GMDIATTQAEDSQFVESPYKVYIGNLAKTVTN 197
Query: 644 EMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFLLEGQKIRV 823
E+L+ FSEKGKVL AKV R PGTSKS GFGFV+FSS+E+VEAAI A NN +LEGQKIRV
Sbjct: 198 ELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257
Query: 824 NKA 832
NKA
Sbjct: 258 NKA 260
>gi|225450219|ref|XP_002265629.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 247
Score = 245 bits (625), Expect = 8e-063
Identities = 128/194 (65%), Positives = 158/194 (81%), Gaps = 7/194 (3%)
Frame = +2
Query: 245 TEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGF 424
T E P + ++RR+Y+GNIPRT+ + +L ++VEEHGAVE+ +VMYDKYSGRSRRF F
Sbjct: 57 TAEAPVATSDV-AARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAF 115
Query: 425 ATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPY 604
TMK+V DANA IEKLNGT I GRE+KVNITEKPL + D+SLLQ+E++ F+DSP+
Sbjct: 116 VTMKTVEDANAAIEKLNGTEIGGREIKVNITEKPL-----LTLDMSLLQAEESQFIDSPH 170
Query: 605 KVYVGNLAKSVTKEMLESLFSEK-GKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIV 781
KVYVGNLA++VT + L FSEK GKVLSAKVSRVPGTSKS+GFGFV+FSS+EDVEAAI
Sbjct: 171 KVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAIS 230
Query: 782 AFNNFLLEGQKIRV 823
+ NN L+GQ+IRV
Sbjct: 231 SCNNAFLDGQRIRV 244
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650
[Sorghum bicolor]
Length = 242
Score = 226 bits (574), Expect = 7e-057
Identities = 110/188 (58%), Positives = 143/188 (76%), Gaps = 6/188 (3%)
Frame = +2
Query: 269 PNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVGD 448
P ++R++Y+GN+PRTVTN++L + HG VE+ +VMYDKY+ RSRRFGF TM +V +
Sbjct: 61 PEVVAARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEE 120
Query: 449 ANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLA 628
ANA +E LNGT + GR++KVN+TE L S+P+ + FVDS YKVYVGNLA
Sbjct: 121 ANAAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPE------SEPVFVDSQYKVYVGNLA 174
Query: 629 KSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFLLEG 808
K+VT E+L++ FSEKGK+LSA VS +PGTSKS G+GFVTFSS+E+VEAA+ FNN LEG
Sbjct: 175 KNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEG 234
Query: 809 QKIRVNKA 832
Q IRVN+A
Sbjct: 235 QPIRVNRA 242
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
Length = 245
Score = 225 bits (571), Expect = 1e-056
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 6/188 (3%)
Frame = +2
Query: 269 PNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVGD 448
P ++R++Y+GNIPRTVTN++L + +HG VE+ +VM+DKY+GRSRRFGF TM + +
Sbjct: 64 PEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEE 123
Query: 449 ANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLA 628
ANA IE LN T + GR++KVN+TE L S+P+ + FVDS YKVYVGNLA
Sbjct: 124 ANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPE------PEPVFVDSQYKVYVGNLA 177
Query: 629 KSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFLLEG 808
KSVT EML++ FSEKG+VLSA VSR+PGT+KS G+GFVTFSS+E+V+AA+ FNN LEG
Sbjct: 178 KSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEG 237
Query: 809 QKIRVNKA 832
Q IRVNKA
Sbjct: 238 QPIRVNKA 245
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 223 bits (568), Expect = 3e-056
Identities = 120/217 (55%), Positives = 152/217 (70%), Gaps = 7/217 (3%)
Frame = +2
Query: 176 SVPTAISLPRTSRTRLIPRATMETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEE 355
S P +S R R +A ++ +E E RR+Y+GNIPRT TNE+L K+ E
Sbjct: 37 SHPCPVSALRRKRV-FSTKAQVQVQEAVQGGKQKEIERRLYVGNIPRTSTNEELAKIFGE 95
Query: 356 HGAVEQVQVMYDKYSGRSRRFGFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLEL 535
G VE+ +VMYDKY+ RSRRF F TM +V DA A IEK+NGT I GR +KVNITEKPL++
Sbjct: 96 CGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGGRVIKVNITEKPLDV 155
Query: 536 SSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGT 715
S + +E+A F+DSPYKVYVGNLAK+VT E L+ F+EKG VL AKV+R+P T
Sbjct: 156 SGLNR------LTEEAEFIDSPYKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPET 209
Query: 716 SKSTGFGFVTFSSDEDVEAAIVAFNNFLLEGQKIRVN 826
KS G+GFV+FSS+ DVEAAI AFNN +LEG+ +RVN
Sbjct: 210 GKSGGYGFVSFSSEADVEAAISAFNNVVLEGKPMRVN 246
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 244
Score = 218 bits (553), Expect = 2e-054
Identities = 109/188 (57%), Positives = 141/188 (75%), Gaps = 6/188 (3%)
Frame = +2
Query: 269 PNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVGD 448
P ++R++Y+GNIPRTVTN++L+ + HG V + +VMYDKYSGRSRRFGF TM + +
Sbjct: 63 PEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEE 122
Query: 449 ANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLA 628
A IE LN T + GR++KVN+TE L +S+P+ + +FVDS YKVYVGNLA
Sbjct: 123 VAAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPE------SEPSFVDSQYKVYVGNLA 176
Query: 629 KSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFLLEG 808
K VT E+L++ FSEKG+VLSA VSR+PGT KS G+GFVTFSS+E+VEAA+ FNN LEG
Sbjct: 177 KKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEG 236
Query: 809 QKIRVNKA 832
Q IRVN+A
Sbjct: 237 QTIRVNRA 244
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein
precursor [Solanum tuberosum]
Length = 289
Score = 146 bits (366), Expect = 9e-033
Identities = 96/273 (35%), Positives = 143/273 (52%), Gaps = 18/273 (6%)
Frame = +2
Query: 38 LPSPTMATFLTAVVSIKPTLFSFH-SESSTSLQSQTNAFALKAKAFPSVPTAISLPRTSR 214
LP PT T + S+ P+ + S SST +++ F K ++L +
Sbjct: 18 LPKPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVRK----------VTLSDFDQ 67
Query: 215 TRLIPRATMETEEKPALDP-------NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQ 373
+ + EE D NA ++++GN+P +V + L +L E G VE
Sbjct: 68 IEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEM 127
Query: 374 VQVMYDKYSGRSRRFGFATMKSVGDANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSP 553
V+V+YDK +GRSR FGF TM S A ++ NG I+GR ++VN P + +S
Sbjct: 128 VEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGD 187
Query: 554 DLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGF 733
+ S +DS +VYVGNLA SV ++ LE+LFSE+GKV+ AKV + +S GF
Sbjct: 188 NSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGF 247
Query: 734 GFVTFSSDEDVEAAIVAFNNFLLEGQKIRVNKA 832
GFVT+SS ++V AI + + L G+ IRV+ A
Sbjct: 248 GFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPA 280
>gi|20159727|gb|AAM11915.1| plastid-specific ribosomal protein 2 precursor
[Deschampsia antarctica]
Length = 114
Score = 139 bits (348), Expect = 1e-030
Identities = 74/114 (64%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Frame = +2
Query: 491 GREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSE 670
GR++KVN+TE L S+P+ + AFVDS YKVYVGNLAK+VT E+L++ FSE
Sbjct: 7 GRKIKVNVTESFLPNIDPSAPE------AEPAFVDSQYKVYVGNLAKTVTMEVLKNFFSE 60
Query: 671 KGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVEAAIVAFNNFLLEGQKIRVNKA 832
KG+VLSA VSRVPGT KS GFGFVTFSSDE+VEAA+ FNN LEGQ IRVN+A
Sbjct: 61 KGEVLSATVSRVPGTPKSKGFGFVTFSSDEEVEAAVSTFNNTELEGQAIRVNRA 114
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica
Group]
Length = 226
Score = 118 bits (294), Expect = 2e-024
Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 7/136 (5%)
Frame = +2
Query: 269 PNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVGD 448
P ++R++Y+GNIPRTVTN++L + +HG VE+ +VM+DKY+GRSRRFGF TM + +
Sbjct: 64 PEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEE 123
Query: 449 ANAVIEKLNGTTIEGREVKVNITEKPLELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLA 628
ANA IE LN T + GR++KVN+TE L S+P+ + FVDS Y+ +G +
Sbjct: 124 ANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPE------PEPVFVDSQYRFTLGEVL 177
Query: 629 KSVTKEMLESLFSEKG 676
S T + KG
Sbjct: 178 -SATVSRIPGTAKSKG 192
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,369,264,541,557
Number of Sequences: 15229318
Number of Extensions: 4369264541557
Number of Successful Extensions: 1024086044
Number of sequences better than 0.0: 0
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