BLASTX 7.6.2
Query= UN39256 /QuerySize=488
(487 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G31985.1 | Symbols: | 60S ribosomal protein L... 109 9e-025
TAIR9_protein||AT3G02190.1 | Symbols: | 60S ribosomal protein L... 104 3e-023
TAIR9_protein||AT2G25210.1 | Symbols: | 60S ribosomal protein L... 94 3e-020
>TAIR9_protein||AT4G31985.1 | Symbols: | 60S ribosomal protein L39 (RPL39C) |
chr4:15469931-15470366 FORWARD
Length = 52
Score = 109 bits (272), Expect = 9e-025
Identities = 49/52 (94%)
Frame = +1
Query: 55 MPSHKSFMIKKKLAKKQRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 210
MPSHKSFMIKKKL KK RQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF*
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 52
>TAIR9_protein||AT3G02190.1 | Symbols: | 60S ribosomal protein L39 (RPL39B) |
chr3:406005-406342 REVERSE
Length = 52
Score = 104 bits (259), Expect = 3e-023
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = +1
Query: 55 MPSHKSFMIKKKLAKKQRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 210
MPSHKSFMIKKKL KK RQNRPIP+WIRLRTDN IRYNAKRRHWRRTKLGF*
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF* 52
>TAIR9_protein||AT2G25210.1 | Symbols: | 60S ribosomal protein L39 (RPL39A) |
chr2:10740157-10740379 FORWARD
Length = 45
Score = 94 bits (233), Expect = 3e-020
Identities = 42/45 (93%)
Frame = +1
Query: 76 MIKKKLAKKQRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 210
MIKKKL KK RQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF*
Sbjct: 1 MIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF* 45
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,642,563,871
Number of Sequences: 33410
Number of Extensions: 19642563871
Number of Successful Extensions: 631179276
Number of sequences better than 0.0: 0
|